Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13m22
(696 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20240-1|AAC50201.1| 150|Homo sapiens C/EBP gamma protein. 51 3e-06
BT019820-1|AAV38623.1| 150|Homo sapiens CCAAT/enhancer binding ... 51 3e-06
BT019819-1|AAV38622.1| 150|Homo sapiens CCAAT/enhancer binding ... 51 3e-06
BC013128-1|AAH13128.1| 150|Homo sapiens CCAAT/enhancer binding ... 51 3e-06
BC007582-1|AAH07582.1| 150|Homo sapiens CCAAT/enhancer binding ... 51 3e-06
M86842-1|AAA52071.1| 351|Homo sapiens cAMP response element reg... 31 3.9
D90209-1|BAA14234.1| 351|Homo sapiens DNA binding protein TAXRE... 31 3.9
CR456384-1|CAG30270.1| 351|Homo sapiens ATF4 protein. 31 3.9
BC073990-1|AAH73990.1| 351|Homo sapiens activating transcriptio... 31 3.9
BC073754-1|AAH73754.1| 351|Homo sapiens activating transcriptio... 31 3.9
BC044895-1|AAH44895.1| 351|Homo sapiens activating transcriptio... 31 3.9
BC024775-1|AAH24775.1| 351|Homo sapiens activating transcriptio... 31 3.9
BC022088-1|AAH22088.1| 351|Homo sapiens activating transcriptio... 31 3.9
BC016855-1|AAH16855.1| 351|Homo sapiens activating transcriptio... 31 3.9
BC011994-1|AAH11994.1| 351|Homo sapiens activating transcriptio... 31 3.9
BC008090-1|AAH08090.1| 351|Homo sapiens activating transcriptio... 31 3.9
AL022312-4|CAB45284.1| 351|Homo sapiens activating transcriptio... 31 3.9
BX649567-2|CAH71137.1| 823|Homo sapiens ankyrin repeat domain 2... 31 5.2
CR450353-1|CAG29349.1| 351|Homo sapiens ATF4 protein. 30 9.1
>U20240-1|AAC50201.1| 150|Homo sapiens C/EBP gamma protein.
Length = 150
Score = 51.2 bits (117), Expect = 3e-06
Identities = 28/82 (34%), Positives = 40/82 (48%)
Frame = -2
Query: 671 DDXXKXRNREXXXXXXXXXXXKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLF 492
D+ + R R KQ+ Q+T RV++LK EN+ LE K+K L+K+L LKDLF
Sbjct: 63 DEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKDLF 122
Query: 491 FAQAKKDTTELEGIDLNKLFED 426
A ++ I D
Sbjct: 123 LEHAHNLADNVQSISTENTTAD 144
>BT019820-1|AAV38623.1| 150|Homo sapiens CCAAT/enhancer binding
protein (C/EBP), gamma protein.
Length = 150
Score = 51.2 bits (117), Expect = 3e-06
Identities = 28/82 (34%), Positives = 40/82 (48%)
Frame = -2
Query: 671 DDXXKXRNREXXXXXXXXXXXKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLF 492
D+ + R R KQ+ Q+T RV++LK EN+ LE K+K L+K+L LKDLF
Sbjct: 63 DEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKDLF 122
Query: 491 FAQAKKDTTELEGIDLNKLFED 426
A ++ I D
Sbjct: 123 LEHAHNLADNVQSISTENTTAD 144
>BT019819-1|AAV38622.1| 150|Homo sapiens CCAAT/enhancer binding
protein (C/EBP), gamma protein.
Length = 150
Score = 51.2 bits (117), Expect = 3e-06
Identities = 28/82 (34%), Positives = 40/82 (48%)
Frame = -2
Query: 671 DDXXKXRNREXXXXXXXXXXXKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLF 492
D+ + R R KQ+ Q+T RV++LK EN+ LE K+K L+K+L LKDLF
Sbjct: 63 DEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKDLF 122
Query: 491 FAQAKKDTTELEGIDLNKLFED 426
A ++ I D
Sbjct: 123 LEHAHNLADNVQSISTENTTAD 144
>BC013128-1|AAH13128.1| 150|Homo sapiens CCAAT/enhancer binding
protein (C/EBP), gamma protein.
Length = 150
Score = 51.2 bits (117), Expect = 3e-06
Identities = 28/82 (34%), Positives = 40/82 (48%)
Frame = -2
Query: 671 DDXXKXRNREXXXXXXXXXXXKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLF 492
D+ + R R KQ+ Q+T RV++LK EN+ LE K+K L+K+L LKDLF
Sbjct: 63 DEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKDLF 122
Query: 491 FAQAKKDTTELEGIDLNKLFED 426
A ++ I D
Sbjct: 123 LEHAHNLADNVQSISTENTTAD 144
>BC007582-1|AAH07582.1| 150|Homo sapiens CCAAT/enhancer binding
protein (C/EBP), gamma protein.
Length = 150
Score = 51.2 bits (117), Expect = 3e-06
Identities = 28/82 (34%), Positives = 40/82 (48%)
Frame = -2
Query: 671 DDXXKXRNREXXXXXXXXXXXKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLF 492
D+ + R R KQ+ Q+T RV++LK EN+ LE K+K L+K+L LKDLF
Sbjct: 63 DEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKDLF 122
Query: 491 FAQAKKDTTELEGIDLNKLFED 426
A ++ I D
Sbjct: 123 LEHAHNLADNVQSISTENTTAD 144
>M86842-1|AAA52071.1| 351|Homo sapiens cAMP response element
regulatory protein protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = -2
Query: 572 KLKAENQVLEEKVKTLSKQLQFLKDL 495
+L+ +N+ L+E+ +L+K++Q+LKDL
Sbjct: 312 ELEKKNEALKERADSLAKEIQYLKDL 337
>D90209-1|BAA14234.1| 351|Homo sapiens DNA binding protein TAXREB67
protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = -2
Query: 572 KLKAENQVLEEKVKTLSKQLQFLKDL 495
+L+ +N+ L+E+ +L+K++Q+LKDL
Sbjct: 312 ELEKKNEALKERADSLAKEIQYLKDL 337
>CR456384-1|CAG30270.1| 351|Homo sapiens ATF4 protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = -2
Query: 572 KLKAENQVLEEKVKTLSKQLQFLKDL 495
+L+ +N+ L+E+ +L+K++Q+LKDL
Sbjct: 312 ELEKKNEALKERADSLAKEIQYLKDL 337
>BC073990-1|AAH73990.1| 351|Homo sapiens activating transcription
factor 4 (tax-responsive enhancer element B67) protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = -2
Query: 572 KLKAENQVLEEKVKTLSKQLQFLKDL 495
+L+ +N+ L+E+ +L+K++Q+LKDL
Sbjct: 312 ELEKKNEALKERADSLAKEIQYLKDL 337
>BC073754-1|AAH73754.1| 351|Homo sapiens activating transcription
factor 4 (tax-responsive enhancer element B67) protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = -2
Query: 572 KLKAENQVLEEKVKTLSKQLQFLKDL 495
+L+ +N+ L+E+ +L+K++Q+LKDL
Sbjct: 312 ELEKKNEALKERADSLAKEIQYLKDL 337
>BC044895-1|AAH44895.1| 351|Homo sapiens activating transcription
factor 4 (tax-responsive enhancer element B67) protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = -2
Query: 572 KLKAENQVLEEKVKTLSKQLQFLKDL 495
+L+ +N+ L+E+ +L+K++Q+LKDL
Sbjct: 312 ELEKKNEALKERADSLAKEIQYLKDL 337
>BC024775-1|AAH24775.1| 351|Homo sapiens activating transcription
factor 4 (tax-responsive enhancer element B67) protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = -2
Query: 572 KLKAENQVLEEKVKTLSKQLQFLKDL 495
+L+ +N+ L+E+ +L+K++Q+LKDL
Sbjct: 312 ELEKKNEALKERADSLAKEIQYLKDL 337
>BC022088-1|AAH22088.1| 351|Homo sapiens activating transcription
factor 4 (tax-responsive enhancer element B67) protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = -2
Query: 572 KLKAENQVLEEKVKTLSKQLQFLKDL 495
+L+ +N+ L+E+ +L+K++Q+LKDL
Sbjct: 312 ELEKKNEALKERADSLAKEIQYLKDL 337
>BC016855-1|AAH16855.1| 351|Homo sapiens activating transcription
factor 4 (tax-responsive enhancer element B67) protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = -2
Query: 572 KLKAENQVLEEKVKTLSKQLQFLKDL 495
+L+ +N+ L+E+ +L+K++Q+LKDL
Sbjct: 312 ELEKKNEALKERADSLAKEIQYLKDL 337
>BC011994-1|AAH11994.1| 351|Homo sapiens activating transcription
factor 4 (tax-responsive enhancer element B67) protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = -2
Query: 572 KLKAENQVLEEKVKTLSKQLQFLKDL 495
+L+ +N+ L+E+ +L+K++Q+LKDL
Sbjct: 312 ELEKKNEALKERADSLAKEIQYLKDL 337
>BC008090-1|AAH08090.1| 351|Homo sapiens activating transcription
factor 4 (tax-responsive enhancer element B67) protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = -2
Query: 572 KLKAENQVLEEKVKTLSKQLQFLKDL 495
+L+ +N+ L+E+ +L+K++Q+LKDL
Sbjct: 312 ELEKKNEALKERADSLAKEIQYLKDL 337
>AL022312-4|CAB45284.1| 351|Homo sapiens activating transcription
factor 4 (tax-responsiveene protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = -2
Query: 572 KLKAENQVLEEKVKTLSKQLQFLKDL 495
+L+ +N+ L+E+ +L+K++Q+LKDL
Sbjct: 312 ELEKKNEALKERADSLAKEIQYLKDL 337
>BX649567-2|CAH71137.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A3 protein.
Length = 823
Score = 30.7 bits (66), Expect = 5.2
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -2
Query: 593 ETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFAQAKKDTTELEGIDLNKLFEDL 423
E S +SK+KAEN+ L E++ + LKD F + +D+ + + L + DL
Sbjct: 645 EMSSAISKVKAENEFLTEQLSETQIKFNALKDKF--RKTRDSLRKKSLALETVQNDL 699
>CR450353-1|CAG29349.1| 351|Homo sapiens ATF4 protein.
Length = 351
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/26 (42%), Positives = 21/26 (80%)
Frame = -2
Query: 572 KLKAENQVLEEKVKTLSKQLQFLKDL 495
+L+ +N+ L+E+ +L+K+ Q+LKDL
Sbjct: 312 ELEKKNEALKERADSLAKETQYLKDL 337
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,680,479
Number of Sequences: 237096
Number of extensions: 1399996
Number of successful extensions: 6840
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6840
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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