Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt13l01
         (453 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14 pro...   194   1e-49
BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14 p...   194   1e-49
BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14 p...   194   1e-49
BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14 p...   194   1e-49
BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14 p...   194   1e-49
BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14 p...   194   1e-49
BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal pr...   182   4e-46

>M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  194 bits (473), Expect = 1e-49
 Identities = 98/138 (71%), Positives = 105/138 (76%)
 Frame = -2

Query: 452 PRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 273
           PRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMKV
Sbjct: 3   PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV 62

Query: 272 KADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXXXX 93
           KADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA           GAQ         
Sbjct: 63  KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARS 122

Query: 92  SMKIGRIEDVTPVPSDST 39
            MKIGRIEDVTP+PSDST
Sbjct: 123 GMKIGRIEDVTPIPSDST 140


>BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  194 bits (473), Expect = 1e-49
 Identities = 98/138 (71%), Positives = 105/138 (76%)
 Frame = -2

Query: 452 PRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 273
           PRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMKV
Sbjct: 3   PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV 62

Query: 272 KADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXXXX 93
           KADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA           GAQ         
Sbjct: 63  KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARS 122

Query: 92  SMKIGRIEDVTPVPSDST 39
            MKIGRIEDVTP+PSDST
Sbjct: 123 GMKIGRIEDVTPIPSDST 140


>BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  194 bits (473), Expect = 1e-49
 Identities = 98/138 (71%), Positives = 105/138 (76%)
 Frame = -2

Query: 452 PRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 273
           PRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMKV
Sbjct: 3   PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV 62

Query: 272 KADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXXXX 93
           KADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA           GAQ         
Sbjct: 63  KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARS 122

Query: 92  SMKIGRIEDVTPVPSDST 39
            MKIGRIEDVTP+PSDST
Sbjct: 123 GMKIGRIEDVTPIPSDST 140


>BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  194 bits (473), Expect = 1e-49
 Identities = 98/138 (71%), Positives = 105/138 (76%)
 Frame = -2

Query: 452 PRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 273
           PRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMKV
Sbjct: 3   PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV 62

Query: 272 KADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXXXX 93
           KADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA           GAQ         
Sbjct: 63  KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARS 122

Query: 92  SMKIGRIEDVTPVPSDST 39
            MKIGRIEDVTP+PSDST
Sbjct: 123 GMKIGRIEDVTPIPSDST 140


>BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  194 bits (473), Expect = 1e-49
 Identities = 98/138 (71%), Positives = 105/138 (76%)
 Frame = -2

Query: 452 PRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 273
           PRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMKV
Sbjct: 3   PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV 62

Query: 272 KADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXXXX 93
           KADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA           GAQ         
Sbjct: 63  KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARS 122

Query: 92  SMKIGRIEDVTPVPSDST 39
            MKIGRIEDVTP+PSDST
Sbjct: 123 GMKIGRIEDVTPIPSDST 140


>BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  194 bits (473), Expect = 1e-49
 Identities = 98/138 (71%), Positives = 105/138 (76%)
 Frame = -2

Query: 452 PRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 273
           PRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMKV
Sbjct: 3   PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV 62

Query: 272 KADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXXXX 93
           KADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA           GAQ         
Sbjct: 63  KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARS 122

Query: 92  SMKIGRIEDVTPVPSDST 39
            MKIGRIEDVTP+PSDST
Sbjct: 123 GMKIGRIEDVTPIPSDST 140


>BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal
           protein S14 protein.
          Length = 170

 Score =  182 bits (444), Expect = 4e-46
 Identities = 92/138 (66%), Positives = 100/138 (72%)
 Frame = -2

Query: 452 PRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 273
           P K K  KEE  + LGPQ   GE VFGV HIFASFNDTFVHVTDLSG++TI RVTGGMKV
Sbjct: 3   PGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTGGMKV 62

Query: 272 KADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXXXX 93
           KADRDE+SPYAAML  QDVA++CK LGI ALHI+LRA           GAQ         
Sbjct: 63  KADRDESSPYAAMLTTQDVAQRCKELGIIALHIQLRATGGNRTKTLGPGAQSALRALACS 122

Query: 92  SMKIGRIEDVTPVPSDST 39
            MKIGRIEDVTP+PSDST
Sbjct: 123 GMKIGRIEDVTPIPSDST 140


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,668,226
Number of Sequences: 237096
Number of extensions: 1620641
Number of successful extensions: 4181
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4175
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)