Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13k11
(865 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 34 0.77
AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein. 33 1.3
X13403-1|CAA31767.1| 743|Homo sapiens protein ( Human mRNA for ... 32 2.3
CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein. 32 2.3
BC052274-1|AAH52274.1| 743|Homo sapiens POU class 2 homeobox 1 ... 32 2.3
BC050588-1|AAH50588.1| 957|Homo sapiens melanoma antigen family... 32 2.3
BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein. 32 2.3
BC007388-1|AAH07388.1| 561|Homo sapiens POU2F1 protein protein. 32 2.3
BC003571-1|AAH03571.1| 743|Homo sapiens POU2F1 protein protein. 32 2.3
BC001664-1|AAH01664.1| 743|Homo sapiens POU2F1 protein protein. 32 2.3
AL136984-5|CAI15171.1| 561|Homo sapiens POU domain, class 2, tr... 32 2.3
AL136984-4|CAI15170.1| 741|Homo sapiens POU domain, class 2, tr... 32 2.3
AL136984-3|CAI15169.1| 743|Homo sapiens POU domain, class 2, tr... 32 2.3
AL136984-1|CAI15167.1| 755|Homo sapiens POU domain, class 2, tr... 32 2.3
AL096827-1|CAI42970.1| 957|Homo sapiens melanoma antigen family... 32 2.3
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 32 2.3
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 32 2.3
AF490507-1|AAM08354.1| 957|Homo sapiens hepatocellular carcinom... 32 2.3
AB046807-1|BAB13413.1| 991|Homo sapiens KIAA1587 protein protein. 32 2.3
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 31 4.1
AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane muc... 31 4.1
AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin ... 31 4.1
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 31 5.4
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 31 5.4
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 30 9.5
AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein. 30 9.5
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 33.9 bits (74), Expect = 0.77
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +2
Query: 374 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSI---TLF 544
+ S+ TS AP + + TT +A + TS+ TS AP +I T
Sbjct: 671 STTSAPTTSTTSAPTTSTTSTPQTTTSSAPT---SSTTSAPTTSTISAPTTSTISAPTTS 727
Query: 545 TTTAGAATIVLEPTDTSSLITSVALAPVEDSITS--FTXTAGAAT 673
TT+A A+ PT TSS T+ + S TS T T A T
Sbjct: 728 TTSAPTASTTSAPTSTSSAPTTNTTSAPTTSTTSAPITSTISAPT 772
Score = 32.3 bits (70), Expect = 2.3
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +2
Query: 374 TNASSLITSVALAPVEDSIGS---FTTTAGAATIVLEPTDTSSL-ITSVALAPVEDSITL 541
+ S+ TS AP +I + TT+A A+ PT TSS T+ AP + +
Sbjct: 703 STTSAPTTSTISAPTTSTISAPTTSTTSAPTASTTSAPTSTSSAPTTNTTSAPTTSTTSA 762
Query: 542 -FTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTXTAGAAT 673
T+T A T T +S I+S + TS T + +T
Sbjct: 763 PITSTISAPTTSTTSTPQTSTISSPTTSTTPTPQTSTTSSPTTST 807
>AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein.
Length = 589
Score = 33.1 bits (72), Expect = 1.3
Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Frame = +2
Query: 374 TNASSLITSVALA-PVEDSIGSFTTTAGAATIVLEPTD--TSSLITSV-ALAPVEDSITL 541
T L T VA V+ ++ S T T T + TD T SL+T++ + + +IT
Sbjct: 327 TTMEPLSTIVATTGTVKTTVTSSTATFRETTTLTSTTDISTESLMTAMTSTTRLTSAITS 386
Query: 542 FTTTAGAATIVLEPTDTSSL------ITSVALAPVEDSITSFT 652
TT T PT S+L I S L P D ITS T
Sbjct: 387 KTTLTSLKTTASRPTANSTLSSLTSSILSSTLVPSTDMITSHT 429
>X13403-1|CAA31767.1| 743|Homo sapiens protein ( Human mRNA for
octamer-binding protein Oct-1. ).
Length = 743
Score = 32.3 bits (70), Expect = 2.3
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S + T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSAS- 541
Query: 572 VLEPTDTSSLITSVALAPVEDSIT-SFTXTAGAATI 676
T T+S S L + +T S TA AA +
Sbjct: 542 ETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAAL 577
>CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein.
Length = 364
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +2
Query: 401 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATIVLE 580
V P+ ++ + TT + T+ PT T+ +T+V V ++++ TTT T+ +
Sbjct: 129 VTTTPIVTTVPTVTTVRTSTTV---PTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVS 185
Query: 581 PT---DTSSLITSVALAPVEDSITSF 649
T T++ I + PV ++++F
Sbjct: 186 TTTSVPTTTSIPTTTSVPVTTTVSTF 211
>BC052274-1|AAH52274.1| 743|Homo sapiens POU class 2 homeobox 1
protein.
Length = 743
Score = 32.3 bits (70), Expect = 2.3
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S + T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSAS- 541
Query: 572 VLEPTDTSSLITSVALAPVEDSIT-SFTXTAGAATI 676
T T+S S L + +T S TA AA +
Sbjct: 542 ETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAAL 577
>BC050588-1|AAH50588.1| 957|Homo sapiens melanoma antigen family E,
1 protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.3
Identities = 34/101 (33%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Frame = +2
Query: 371 LTNASSLITSVALAPVEDSIGSF--TTTAGAATIVLEPTDTSSLITSVALAPVE-DSITL 541
L L TSV P E S T T G +T V PT TSV P E S ++
Sbjct: 214 LAATEGLSTSVQATPDEGPSTSVPPTATEGLSTPV-PPTRDEGPSTSVPATPGEGPSTSV 272
Query: 542 FTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTXTAG 664
+ +I L PT TSV E TS TAG
Sbjct: 273 LPAASDGQSISLVPTRGKGSSTSVPPTATEGLSTSVQPTAG 313
>BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein.
Length = 364
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +2
Query: 401 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATIVLE 580
V P+ ++ + TT + T+ PT T+ +T+V V ++++ TTT T+ +
Sbjct: 129 VTTTPIVTTVPTVTTVRTSTTV---PTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVS 185
Query: 581 PT---DTSSLITSVALAPVEDSITSF 649
T T++ I + PV ++++F
Sbjct: 186 TTTSVPTTTSIPTTTSVPVTTTVSTF 211
>BC007388-1|AAH07388.1| 561|Homo sapiens POU2F1 protein protein.
Length = 561
Score = 32.3 bits (70), Expect = 2.3
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S + T+ A +A+
Sbjct: 392 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSAS- 449
Query: 572 VLEPTDTSSLITSVALAPVEDSIT-SFTXTAGAATI 676
T T+S S L + +T S TA AA +
Sbjct: 450 ETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAAL 485
>BC003571-1|AAH03571.1| 743|Homo sapiens POU2F1 protein protein.
Length = 743
Score = 32.3 bits (70), Expect = 2.3
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S + T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSAS- 541
Query: 572 VLEPTDTSSLITSVALAPVEDSIT-SFTXTAGAATI 676
T T+S S L + +T S TA AA +
Sbjct: 542 ETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAAL 577
>BC001664-1|AAH01664.1| 743|Homo sapiens POU2F1 protein protein.
Length = 743
Score = 32.3 bits (70), Expect = 2.3
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S + T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSAS- 541
Query: 572 VLEPTDTSSLITSVALAPVEDSIT-SFTXTAGAATI 676
T T+S S L + +T S TA AA +
Sbjct: 542 ETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAAL 577
>AL136984-5|CAI15171.1| 561|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 561
Score = 32.3 bits (70), Expect = 2.3
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S + T+ A +A+
Sbjct: 392 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSAS- 449
Query: 572 VLEPTDTSSLITSVALAPVEDSIT-SFTXTAGAATI 676
T T+S S L + +T S TA AA +
Sbjct: 450 ETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAAL 485
>AL136984-4|CAI15170.1| 741|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 741
Score = 32.3 bits (70), Expect = 2.3
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S + T+ A +A+
Sbjct: 482 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSAS- 539
Query: 572 VLEPTDTSSLITSVALAPVEDSIT-SFTXTAGAATI 676
T T+S S L + +T S TA AA +
Sbjct: 540 ETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAAL 575
>AL136984-3|CAI15169.1| 743|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 743
Score = 32.3 bits (70), Expect = 2.3
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S + T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSAS- 541
Query: 572 VLEPTDTSSLITSVALAPVEDSIT-SFTXTAGAATI 676
T T+S S L + +T S TA AA +
Sbjct: 542 ETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAAL 577
>AL136984-1|CAI15167.1| 755|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 755
Score = 32.3 bits (70), Expect = 2.3
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S + T+ A +A+
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSAS- 553
Query: 572 VLEPTDTSSLITSVALAPVEDSIT-SFTXTAGAATI 676
T T+S S L + +T S TA AA +
Sbjct: 554 ETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAAL 589
>AL096827-1|CAI42970.1| 957|Homo sapiens melanoma antigen family E,
1 protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.3
Identities = 34/101 (33%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Frame = +2
Query: 371 LTNASSLITSVALAPVEDSIGSF--TTTAGAATIVLEPTDTSSLITSVALAPVE-DSITL 541
L L TSV P E S T T G +T V PT TSV P E S ++
Sbjct: 214 LAATEGLSTSVQATPDEGPSTSVPPTATEGLSTPV-PPTRDEGPSTSVPATPGEGPSTSV 272
Query: 542 FTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTXTAG 664
+ +I L PT TSV E TS TAG
Sbjct: 273 LPAASDGQSISLVPTRGKGSSTSVPPTATEGLSTSVQPTAG 313
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 32.3 bits (70), Expect = 2.3
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +2
Query: 395 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALA--PV--EDSITLFTTTAGA 562
TS + ++ S TT G + + P+D S+ +TS+ ++ PV ++ T+ TT
Sbjct: 2719 TSTPVTTSAEASSSPTTAEGTSMRISTPSDGSTPLTSILVSTLPVASSEASTVSTTAVDT 2778
Query: 563 ATIVLEPTDTSSLITSVALAPVEDSITSFTXT 658
+ V T+ SS T+ + + S S T T
Sbjct: 2779 SIPVTTSTEASSSPTTAEVTSMPTSTPSETST 2810
Score = 31.9 bits (69), Expect = 3.1
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +2
Query: 377 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTA 556
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 557 GAATIVLEPTDTSSLITS 610
A+T+ P D++S +T+
Sbjct: 822 EASTLSTTPVDSNSPVTT 839
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +2
Query: 395 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALA--PV--EDSITLFTTTAGA 562
TS+ + ++ S TT + + P++ S+ +TS+ ++ PV ++ TL TT
Sbjct: 2601 TSIPVTTSTETSSSPTTAKDTSMPISTPSEVSTSLTSILVSTMPVASSEASTLSTTPVDT 2660
Query: 563 ATIVLEPTDTSSLITS 610
T+V T TSS T+
Sbjct: 2661 RTLVTTSTGTSSSPTT 2676
Score = 31.5 bits (68), Expect = 4.1
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 383 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITLFT 547
S+L+T+V ++P+ + +T G +T +L T S + + SIT
Sbjct: 3813 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 3872
Query: 548 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTXTAGAAT 673
+T +V TS S+A P D+ T+FT + A+
Sbjct: 3873 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFTPSTDTAS 3914
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 443 TTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATIVLEPTDTSSLITS--VA 616
T++ A+T+ P DTS+ IT+ A TTT G + + P++ S L+TS V+
Sbjct: 760 TSSEASTLSTTPLDTSTHITTSTEASCSP-----TTTEGTSMPISTPSEGSPLLTSIPVS 814
Query: 617 LAPV 628
+ PV
Sbjct: 815 ITPV 818
Score = 31.1 bits (67), Expect = 5.4
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +2
Query: 413 PVEDSIGSFTTTAG--AATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATIVLEPT 586
P+ + + S T A A+T+ P DTS+ +T+ A A TT G + + P+
Sbjct: 2693 PLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSAEASSSP-----TTAEGTSMRISTPS 2747
Query: 587 DTSSLITSVALA--PVEDSITSFTXTAGAATIV 679
D S+ +TS+ ++ PV S S T T +
Sbjct: 2748 DGSTPLTSILVSTLPVASSEASTVSTTAVDTSI 2780
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 32.3 bits (70), Expect = 2.3
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +2
Query: 395 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALA--PV--EDSITLFTTTAGA 562
TS + ++ S TT G + + P+D S+ +TS+ ++ PV ++ T+ TT
Sbjct: 2719 TSTPVTTSAEASSSPTTAEGTSMRISTPSDGSTPLTSILVSTLPVASSEASTVSTTAVDT 2778
Query: 563 ATIVLEPTDTSSLITSVALAPVEDSITSFTXT 658
+ V T+ SS T+ + + S S T T
Sbjct: 2779 SIPVTTSTEASSSPTTAEVTSMPTSTPSETST 2810
Score = 31.9 bits (69), Expect = 3.1
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +2
Query: 377 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTA 556
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 557 GAATIVLEPTDTSSLITS 610
A+T+ P D++S +T+
Sbjct: 822 EASTLSTTPVDSNSPVTT 839
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +2
Query: 395 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALA--PV--EDSITLFTTTAGA 562
TS+ + ++ S TT + + P++ S+ +TS+ ++ PV ++ TL TT
Sbjct: 2601 TSIPVTTSTETSSSPTTAKDTSMPISTPSEVSTSLTSILVSTMPVASSEASTLSTTPVDT 2660
Query: 563 ATIVLEPTDTSSLITS 610
T+V T TSS T+
Sbjct: 2661 RTLVTTSTGTSSSPTT 2676
Score = 31.5 bits (68), Expect = 4.1
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 383 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITLFT 547
S+L+T+V ++P+ + +T G +T +L T S + + SIT
Sbjct: 3813 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 3872
Query: 548 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTXTAGAAT 673
+T +V TS S+A P D+ T+FT + A+
Sbjct: 3873 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFTPSTDTAS 3914
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 443 TTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATIVLEPTDTSSLITS--VA 616
T++ A+T+ P DTS+ IT+ A TTT G + + P++ S L+TS V+
Sbjct: 760 TSSEASTLSTTPLDTSTHITTSTEASCSP-----TTTEGTSMPISTPSEGSPLLTSIPVS 814
Query: 617 LAPV 628
+ PV
Sbjct: 815 ITPV 818
Score = 31.1 bits (67), Expect = 5.4
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +2
Query: 413 PVEDSIGSFTTTAG--AATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATIVLEPT 586
P+ + + S T A A+T+ P DTS+ +T+ A A TT G + + P+
Sbjct: 2693 PLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSAEASSSP-----TTAEGTSMRISTPS 2747
Query: 587 DTSSLITSVALA--PVEDSITSFTXTAGAATIV 679
D S+ +TS+ ++ PV S S T T +
Sbjct: 2748 DGSTPLTSILVSTLPVASSEASTVSTTAVDTSI 2780
>AF490507-1|AAM08354.1| 957|Homo sapiens hepatocellular
carcinoma-associated protein HCA1 protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.3
Identities = 34/101 (33%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Frame = +2
Query: 371 LTNASSLITSVALAPVEDSIGSF--TTTAGAATIVLEPTDTSSLITSVALAPVE-DSITL 541
L L TSV P E S T T G +T V PT TSV P E S ++
Sbjct: 214 LAATEGLSTSVQATPDEGPSTSVPPTATEGLSTPV-PPTRDEGPSTSVPATPGEGPSTSV 272
Query: 542 FTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTXTAG 664
+ +I L PT TSV E TS TAG
Sbjct: 273 LPAASDGQSISLVPTRGKGSSTSVPPTATEGLSTSVQPTAG 313
>AB046807-1|BAB13413.1| 991|Homo sapiens KIAA1587 protein protein.
Length = 991
Score = 32.3 bits (70), Expect = 2.3
Identities = 34/101 (33%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Frame = +2
Query: 371 LTNASSLITSVALAPVEDSIGSF--TTTAGAATIVLEPTDTSSLITSVALAPVE-DSITL 541
L L TSV P E S T T G +T V PT TSV P E S ++
Sbjct: 248 LAATEGLSTSVQATPDEGPSTSVPPTATEGLSTPV-PPTRDEGPSTSVPATPGEGPSTSV 306
Query: 542 FTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTXTAG 664
+ +I L PT TSV E TS TAG
Sbjct: 307 LPAASDGQSISLVPTRGKGSSTSVPPTATEGLSTSVQPTAG 347
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 31.5 bits (68), Expect = 4.1
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 383 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITLFT 547
S+L+T+V ++P+ + +T G +T +L T S + + SIT
Sbjct: 544 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 603
Query: 548 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTXTAGAAT 673
+T +V TS S+A P D+ T+FT + A+
Sbjct: 604 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFTPSTDTAS 645
>AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane mucin
MUC17 protein.
Length = 1029
Score = 31.5 bits (68), Expect = 4.1
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 383 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITLFT 547
S+L+T+V ++P+ + +T G +T +L T S + + SIT
Sbjct: 349 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 408
Query: 548 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTXTAGAAT 673
+T +V TS S+A P D+ T+FT + A+
Sbjct: 409 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFTPSTDTAS 450
>AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin
MUC3 protein.
Length = 648
Score = 31.5 bits (68), Expect = 4.1
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 383 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITLFT 547
S+L+T+V ++P+ + +T G +T +L T S + + SIT
Sbjct: 349 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 408
Query: 548 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTXTAGAAT 673
+T +V TS S+A P D+ T+FT + A+
Sbjct: 409 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFTPSTDTAS 450
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.1 bits (67), Expect = 5.4
Identities = 27/88 (30%), Positives = 38/88 (43%)
Frame = +2
Query: 395 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATIV 574
TS + S+G TT AT T TS+L +V+ A V + TT T+
Sbjct: 11860 TSTMIPTSTLSLGLLETTGLLATSSSAETSTSTLTLTVSPA-VSGLSSASITTDKPQTVT 11918
Query: 575 LEPTDTSSLITSVALAPVEDSITSFTXT 658
T+TS +TSV ++T T T
Sbjct: 11919 SWNTETSPSVTSVGPPEFSRTVTGTTMT 11946
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 31.1 bits (67), Expect = 5.4
Identities = 27/88 (30%), Positives = 38/88 (43%)
Frame = +2
Query: 395 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATIV 574
TS + S+G TT AT T TS+L +V+ A V + TT T+
Sbjct: 3564 TSTMIPTSTLSLGLLETTGLLATSSSAETSTSTLTLTVSPA-VSGLSSASITTDKPQTVT 3622
Query: 575 LEPTDTSSLITSVALAPVEDSITSFTXT 658
T+TS +TSV ++T T T
Sbjct: 3623 SWNTETSPSVTSVGPPEFSRTVTGTTMT 3650
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/97 (21%), Positives = 36/97 (37%)
Frame = +2
Query: 383 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGA 562
+ L T+ S + ++T G I+ EP+ T+++ S T
Sbjct: 253 TELTTTATTTASTGSTATLSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHV 312
Query: 563 ATIVLEPTDTSSLITSVALAPVEDSITSFTXTAGAAT 673
+T PT TSS T + ++ + TA T
Sbjct: 313 STTATTPTVTSSKATPSSSPGTATALPALRSTATTPT 349
>AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein.
Length = 755
Score = 30.3 bits (65), Expect = 9.5
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITLFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S + T+ A +A+
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 554
Query: 572 VLEPTDTSSLITSVALAPVEDSIT-SFTXTAGAATI 676
TS+ ++S L + +T S TA AA +
Sbjct: 555 TSTIQTTSTPLSS-PLGTSQVMVTASGLQTAAAAAL 589
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,110,432
Number of Sequences: 237096
Number of extensions: 1458344
Number of successful extensions: 3221
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3181
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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