Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13k04
(314 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050719-1|AAH50719.1| 713|Homo sapiens ZBTB1 protein protein. 31 0.54
AY598321-1|AAT06732.1| 644|Homo sapiens L2 protein. 31 0.54
AB023214-1|BAA76841.2| 646|Homo sapiens KIAA0997 protein protein. 31 0.54
AB040919-1|BAA96010.1| 677|Homo sapiens KIAA1486 protein protein. 30 1.6
AF038554-1|AAC02985.2| 243|Homo sapiens density regulated prote... 29 3.8
Z98256-2|CAI20115.1| 211|Homo sapiens TIMP metallopeptidase inh... 28 5.0
Z30183-1|CAA82918.1| 210|Homo sapiens mig-5 protein. 28 5.0
X76227-1|CAA53813.1| 211|Homo sapiens tissue inhibitor of metal... 28 5.0
U67195-1|AAB07547.1| 211|Homo sapiens tissue inhibitor of metal... 28 5.0
U38955-1|AAB17602.1| 170|Homo sapiens tissue inhibitor of metal... 28 5.0
U33114-1|AAC50393.1| 211|Homo sapiens tissue inhibitor of metal... 28 5.0
U14394-1|AAB60373.1| 211|Homo sapiens tissue inhibitor of metal... 28 5.0
U02571-1|AAA17672.1| 211|Homo sapiens tissue inhibitor of metal... 28 5.0
S78453-1|AAB34532.1| 211|Homo sapiens TIMP-3 protein. 28 5.0
L15078-1|AAA21815.1| 197|Homo sapiens metalloproteinase-3 tissu... 28 5.0
CR456593-1|CAG30479.1| 211|Homo sapiens TIMP3 protein. 28 5.0
BT006848-1|AAP35494.1| 211|Homo sapiens tissue inhibitor of met... 28 5.0
BC014277-1|AAH14277.1| 211|Homo sapiens TIMP metallopeptidase i... 28 5.0
AL023282-2|CAI17996.1| 211|Homo sapiens TIMP metallopeptidase i... 28 5.0
AY324188-1|AAQ94112.1| 152|Homo sapiens testis-expressed transm... 28 6.6
X66733-1|CAA47271.1| 699|Homo sapiens epican protein. 27 8.8
X62739-1|CAA44602.1| 337|Homo sapiens CD44 protein. 27 8.8
L05424-5|AAB13626.1| 668|Homo sapiens cell surface glycoprotein... 27 8.8
L05424-2|AAB13625.1| 691|Homo sapiens cell surface glycoprotein... 27 8.8
L05424-1|AAB13628.1| 742|Homo sapiens cell surface glycoprotein... 27 8.8
L05423-1|AAB13623.1| 675|Homo sapiens cell surface glycoprotein... 27 8.8
BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein. 27 8.8
BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein. 27 8.8
BC116187-1|AAI16188.1| 1721|Homo sapiens TNS1 protein protein. 27 8.8
BC004372-1|AAH04372.1| 699|Homo sapiens CD44 molecule (Indian b... 27 8.8
AF225896-1|AAG33700.1| 1735|Homo sapiens tensin protein. 27 8.8
AF029789-1|AAC32547.1| 1041|Homo sapiens GTPase-activating prote... 27 8.8
AC009469-1|AAX88952.1| 1735|Homo sapiens unknown protein. 27 8.8
AB209238-1|BAD92475.1| 873|Homo sapiens tensin variant protein. 27 8.8
>BC050719-1|AAH50719.1| 713|Homo sapiens ZBTB1 protein protein.
Length = 713
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 186 GRRMQTHAKRNGTVSDLAQNGTGLVPELHHTNTSPQKHDD 305
GR++Q HA+R G DL NG G E +P + +
Sbjct: 460 GRQLQEHAQRCGEPQDLTMNGLGNTEEKMDLEENPDEQSE 499
>AY598321-1|AAT06732.1| 644|Homo sapiens L2 protein.
Length = 644
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 186 GRRMQTHAKRNGTVSDLAQNGTGLVPELHHTNTSPQKHDD 305
GR++Q HA+R G DL NG G E +P + +
Sbjct: 460 GRQLQEHAQRCGEPQDLTMNGLGNTEEKMDLEENPDEQSE 499
>AB023214-1|BAA76841.2| 646|Homo sapiens KIAA0997 protein protein.
Length = 646
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 186 GRRMQTHAKRNGTVSDLAQNGTGLVPELHHTNTSPQKHDD 305
GR++Q HA+R G DL NG G E +P + +
Sbjct: 462 GRQLQEHAQRCGEPQDLTMNGLGNTEEKMDLEENPDEQSE 501
>AB040919-1|BAA96010.1| 677|Homo sapiens KIAA1486 protein protein.
Length = 677
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 147 SWQQPRPSGDQDGGRRMQTHAKRNGTVSDLAQNGTGLVPELHHTNTSPQKHDD 305
S +QP P +D ++ T ++ TVS A + +G PE + P+ H D
Sbjct: 159 SRRQPPPKPKRDPSTKLSTSSE---TVSSTAASKSGKTPERTEASAKPRPHSD 208
>AF038554-1|AAC02985.2| 243|Homo sapiens density regulated protein
drp1 protein.
Length = 243
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -3
Query: 213 VSRGSASVGRHLGRRWG 163
+SRGSA+ GR LGR WG
Sbjct: 1 LSRGSAAGGRALGRPWG 17
>Z98256-2|CAI20115.1| 211|Homo sapiens TIMP metallopeptidase
inhibitor 3 (Sorsby fundus dystrophy,
pseudoinflammatory) protein.
Length = 211
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 90 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 145
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 146 KIKSCYYLPCF 156
>Z30183-1|CAA82918.1| 210|Homo sapiens mig-5 protein.
Length = 210
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 89 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 144
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 145 KIKSCYYLPCF 155
>X76227-1|CAA53813.1| 211|Homo sapiens tissue inhibitor of
metalloproteinases-3 protein.
Length = 211
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 90 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 145
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 146 KIKSCYYLPCF 156
>U67195-1|AAB07547.1| 211|Homo sapiens tissue inhibitor of
metalloproteinase-3 protein.
Length = 211
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 90 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 145
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 146 KIKSCYYLPCF 156
>U38955-1|AAB17602.1| 170|Homo sapiens tissue inhibitor of
metalloproteinases-3 protein.
Length = 170
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 49 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 104
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 105 KIKSCYYLPCF 115
>U33114-1|AAC50393.1| 211|Homo sapiens tissue inhibitor of
metalloproteinases-3 protein.
Length = 211
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 90 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 145
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 146 KIKSCYYLPCF 156
>U14394-1|AAB60373.1| 211|Homo sapiens tissue inhibitor of
metalloproteinases-3 protein.
Length = 211
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 90 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 145
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 146 KIKSCYYLPCF 156
>U02571-1|AAA17672.1| 211|Homo sapiens tissue inhibitor of
metalloproteinase-3 precursor protein.
Length = 211
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 90 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 145
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 146 KIKSCYYLPCF 156
>S78453-1|AAB34532.1| 211|Homo sapiens TIMP-3 protein.
Length = 211
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 90 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 145
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 146 KIKSCYYLPCF 156
>L15078-1|AAA21815.1| 197|Homo sapiens metalloproteinase-3 tissue
inhibitor protein.
Length = 197
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 76 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 131
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 132 KIKSCYYLPCF 142
>CR456593-1|CAG30479.1| 211|Homo sapiens TIMP3 protein.
Length = 211
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 90 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 145
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 146 KIKSCYYLPCF 156
>BT006848-1|AAP35494.1| 211|Homo sapiens tissue inhibitor of
metalloproteinase 3 (Sorsby fundus dystrophy,
pseudoinflamm protein.
Length = 211
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 90 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 145
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 146 KIKSCYYLPCF 156
>BC014277-1|AAH14277.1| 211|Homo sapiens TIMP metallopeptidase
inhibitor 3 (Sorsby fundus dystrophy,
pseudoinflammatory) protein.
Length = 211
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 90 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 145
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 146 KIKSCYYLPCF 156
>AL023282-2|CAI17996.1| 211|Homo sapiens TIMP metallopeptidase
inhibitor 3 (Sorsby fundus dystrophy,
pseudoinflammatory) protein.
Length = 211
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 279 LCGVAPELNQCHFV-PGRIQSHCVSRGSASVGRHLGRRWGVVAASYKMGL*XRYHVPIYL 103
LCG+ E+N+ ++ GR+ + G + RW + S + GL RYH+
Sbjct: 90 LCGLKLEVNKYQYLLTGRVYDGKMYTGLCN----FVERWDQLTLSQRKGLNYRYHLGCNC 145
Query: 102 VLSNCKF--CF 76
+ +C + CF
Sbjct: 146 KIKSCYYLPCF 156
>AY324188-1|AAQ94112.1| 152|Homo sapiens testis-expressed
transmembrane-4 protein protein.
Length = 152
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 227 YSPIAFRVGLHPSAAILVAAGAWLLPATKWVCRXGIM 117
Y P+ ++ G + AG +L+ TK+ R GI+
Sbjct: 28 YEPVTYKTGCTLWGIFFIIAGVFLIRVTKYPTRSGII 64
>X66733-1|CAA47271.1| 699|Homo sapiens epican protein.
Length = 699
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 120 DTVSTNPFCSWQQPRPSGDQDGGRRMQTHAKRNGTVSDLAQNGTGLVPELHHT 278
D+ T+ F P G Q GRRM + + T+ A TGLV +L T
Sbjct: 404 DSSWTDFFNPISHPMGRGHQ-AGRRMDMDSSHSTTLQPTANPNTGLVEDLDRT 455
>X62739-1|CAA44602.1| 337|Homo sapiens CD44 protein.
Length = 337
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 120 DTVSTNPFCSWQQPRPSGDQDGGRRMQTHAKRNGTVSDLAQNGTGLVPELHHT 278
D+ T+ F P G Q GRRM + + T+ A TGLV +L T
Sbjct: 181 DSSWTDFFNPISHPMGRGHQ-AGRRMDMDSSHSTTLQPTANPNTGLVEDLDRT 232
>L05424-5|AAB13626.1| 668|Homo sapiens cell surface glycoprotein
CD44 protein.
Length = 668
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 120 DTVSTNPFCSWQQPRPSGDQDGGRRMQTHAKRNGTVSDLAQNGTGLVPELHHT 278
D+ T+ F P G Q GRRM + + T+ A TGLV +L T
Sbjct: 373 DSSWTDFFNPISHPMGRGHQ-AGRRMDMDSSHSTTLQPTANPNTGLVEDLDRT 424
>L05424-2|AAB13625.1| 691|Homo sapiens cell surface glycoprotein
CD44 protein.
Length = 691
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 120 DTVSTNPFCSWQQPRPSGDQDGGRRMQTHAKRNGTVSDLAQNGTGLVPELHHT 278
D+ T+ F P G Q GRRM + + T+ A TGLV +L T
Sbjct: 396 DSSWTDFFNPISHPMGRGHQ-AGRRMDMDSSHSTTLQPTANPNTGLVEDLDRT 447
>L05424-1|AAB13628.1| 742|Homo sapiens cell surface glycoprotein
CD44 protein.
Length = 742
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 120 DTVSTNPFCSWQQPRPSGDQDGGRRMQTHAKRNGTVSDLAQNGTGLVPELHHT 278
D+ T+ F P G Q GRRM + + T+ A TGLV +L T
Sbjct: 447 DSSWTDFFNPISHPMGRGHQ-AGRRMDMDSSHSTTLQPTANPNTGLVEDLDRT 498
>L05423-1|AAB13623.1| 675|Homo sapiens cell surface glycoprotein
CD44 protein.
Length = 675
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 120 DTVSTNPFCSWQQPRPSGDQDGGRRMQTHAKRNGTVSDLAQNGTGLVPELHHT 278
D+ T+ F P G Q GRRM + + T+ A TGLV +L T
Sbjct: 447 DSSWTDFFNPISHPMGRGHQ-AGRRMDMDSSHSTTLQPTANPNTGLVEDLDRT 498
>BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein.
Length = 1768
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 273 GVAPELNQCHFVPGRIQSHCVSRGSASVGRHLGRRWGVVAAS 148
G P +Q + G + S GS S+GRHLG VV S
Sbjct: 1306 GRHPGAHQGNLASGLHSNAIASPGSPSLGRHLGGSGSVVPGS 1347
>BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein.
Length = 1713
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 273 GVAPELNQCHFVPGRIQSHCVSRGSASVGRHLGRRWGVVAAS 148
G P +Q + G + S GS S+GRHLG VV S
Sbjct: 1251 GRHPGAHQGNLASGLHSNAIASPGSPSLGRHLGGSGSVVPGS 1292
>BC116187-1|AAI16188.1| 1721|Homo sapiens TNS1 protein protein.
Length = 1721
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 273 GVAPELNQCHFVPGRIQSHCVSRGSASVGRHLGRRWGVVAAS 148
G P +Q + G + S GS S+GRHLG VV S
Sbjct: 1260 GRHPGAHQGNLASGLHSNAIASPGSPSLGRHLGGSGSVVPGS 1301
>BC004372-1|AAH04372.1| 699|Homo sapiens CD44 molecule (Indian
blood group) protein.
Length = 699
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 120 DTVSTNPFCSWQQPRPSGDQDGGRRMQTHAKRNGTVSDLAQNGTGLVPELHHT 278
D+ T+ F P G Q GRRM + + T+ A TGLV +L T
Sbjct: 404 DSSWTDFFNPISHPMGRGHQ-AGRRMDMDSSHSTTLQPTANPNTGLVEDLDRT 455
>AF225896-1|AAG33700.1| 1735|Homo sapiens tensin protein.
Length = 1735
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 273 GVAPELNQCHFVPGRIQSHCVSRGSASVGRHLGRRWGVVAAS 148
G P +Q + G + S GS S+GRHLG VV S
Sbjct: 1273 GRHPGAHQGNLASGLHSNAIASPGSPSLGRHLGGSGSVVPGS 1314
>AF029789-1|AAC32547.1| 1041|Homo sapiens GTPase-activating protein
protein.
Length = 1041
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 301 SCFCGDVFVWCSSGTKPVPFCARSDTVPLRF 209
+C C DV W S + + R + +PLRF
Sbjct: 631 NCACRDVLAWTFSEQQLDLYHGRGEAIPLRF 661
>AC009469-1|AAX88952.1| 1735|Homo sapiens unknown protein.
Length = 1735
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 273 GVAPELNQCHFVPGRIQSHCVSRGSASVGRHLGRRWGVVAAS 148
G P +Q + G + S GS S+GRHLG VV S
Sbjct: 1273 GRHPGAHQGNLASGLHSNAIASPGSPSLGRHLGGSGSVVPGS 1314
>AB209238-1|BAD92475.1| 873|Homo sapiens tensin variant protein.
Length = 873
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 273 GVAPELNQCHFVPGRIQSHCVSRGSASVGRHLGRRWGVVAAS 148
G P +Q + G + S GS S+GRHLG VV S
Sbjct: 411 GRHPGAHQGNLASGLHSNAIASPGSPSLGRHLGGSGSVVPGS 452
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,465,937
Number of Sequences: 237096
Number of extensions: 1032894
Number of successful extensions: 2767
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 2625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2767
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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