Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt13j21
         (163 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X79239-1|CAA55821.1|  151|Homo sapiens ribosomal protein S13 pro...    76   2e-14
L01124-1|AAA60283.1|  151|Homo sapiens ribosomal protein S13 pro...    76   2e-14
D88010-1|BAA13528.1|  151|Homo sapiens ribosomal protein S13 pro...    76   2e-14
BC100032-1|AAI00033.1|  151|Homo sapiens ribosomal protein S13 p...    76   2e-14
BC066322-1|AAH66322.1|  151|Homo sapiens ribosomal protein S13 p...    76   2e-14
BC029732-1|AAH29732.1|  151|Homo sapiens ribosomal protein S13 p...    76   2e-14
BC006772-1|AAH06772.1|  151|Homo sapiens ribosomal protein S13 p...    76   2e-14
BC000475-1|AAH00475.1|  151|Homo sapiens ribosomal protein S13 p...    76   2e-14
L05090-1|AAC15854.1|  116|Homo sapiens ribosomal protein S13 pro...    66   1e-11

>X79239-1|CAA55821.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 38/53 (71%), Positives = 42/53 (79%)
 Frame = -3

Query: 161 IKKAVAMRKHLERNRKDKDSKFRLILVESRIHRPGPLLQN*GVCFLPNWKYES 3
           IKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHR     +   V   PNWKYES
Sbjct: 92  IKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRV-LPPNWKYES 143


>L01124-1|AAA60283.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 38/53 (71%), Positives = 42/53 (79%)
 Frame = -3

Query: 161 IKKAVAMRKHLERNRKDKDSKFRLILVESRIHRPGPLLQN*GVCFLPNWKYES 3
           IKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHR     +   V   PNWKYES
Sbjct: 92  IKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRV-LPPNWKYES 143


>D88010-1|BAA13528.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 38/53 (71%), Positives = 42/53 (79%)
 Frame = -3

Query: 161 IKKAVAMRKHLERNRKDKDSKFRLILVESRIHRPGPLLQN*GVCFLPNWKYES 3
           IKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHR     +   V   PNWKYES
Sbjct: 92  IKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRV-LPPNWKYES 143


>BC100032-1|AAI00033.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 38/53 (71%), Positives = 42/53 (79%)
 Frame = -3

Query: 161 IKKAVAMRKHLERNRKDKDSKFRLILVESRIHRPGPLLQN*GVCFLPNWKYES 3
           IKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHR     +   V   PNWKYES
Sbjct: 92  IKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRV-LPPNWKYES 143


>BC066322-1|AAH66322.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 38/53 (71%), Positives = 42/53 (79%)
 Frame = -3

Query: 161 IKKAVAMRKHLERNRKDKDSKFRLILVESRIHRPGPLLQN*GVCFLPNWKYES 3
           IKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHR     +   V   PNWKYES
Sbjct: 92  IKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRV-LPPNWKYES 143


>BC029732-1|AAH29732.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 38/53 (71%), Positives = 42/53 (79%)
 Frame = -3

Query: 161 IKKAVAMRKHLERNRKDKDSKFRLILVESRIHRPGPLLQN*GVCFLPNWKYES 3
           IKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHR     +   V   PNWKYES
Sbjct: 92  IKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRV-LPPNWKYES 143


>BC006772-1|AAH06772.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 38/53 (71%), Positives = 42/53 (79%)
 Frame = -3

Query: 161 IKKAVAMRKHLERNRKDKDSKFRLILVESRIHRPGPLLQN*GVCFLPNWKYES 3
           IKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHR     +   V   PNWKYES
Sbjct: 92  IKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRV-LPPNWKYES 143


>BC000475-1|AAH00475.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 38/53 (71%), Positives = 42/53 (79%)
 Frame = -3

Query: 161 IKKAVAMRKHLERNRKDKDSKFRLILVESRIHRPGPLLQN*GVCFLPNWKYES 3
           IKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHR     +   V   PNWKYES
Sbjct: 92  IKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRV-LPPNWKYES 143


>L05090-1|AAC15854.1|  116|Homo sapiens ribosomal protein S13
           protein.
          Length = 116

 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 30/33 (90%), Positives = 33/33 (100%)
 Frame = -3

Query: 161 IKKAVAMRKHLERNRKDKDSKFRLILVESRIHR 63
           IKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHR
Sbjct: 81  IKKAVAVRKHLERNRKDKDAKFRLILIESRIHR 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,499,394
Number of Sequences: 237096
Number of extensions: 201718
Number of successful extensions: 363
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 347
length of database: 76,859,062
effective HSP length: 33
effective length of database: 69,034,894
effective search space used: 1380697880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)