Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt13j14
         (715 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J03626-1|AAA61255.1|  480|Homo sapiens UMPS protein.                  156   8e-38
D86230-1|BAA19923.1|  480|Homo sapiens UMP synthase protein.          156   8e-38
D86227-1|BAA19920.1|  480|Homo sapiens UMP synthase protein.          156   8e-38
CR456787-1|CAG33068.1|  480|Homo sapiens UMPS protein.                156   8e-38
BC007511-1|AAH07511.1|  480|Homo sapiens uridine monophosphate s...   156   8e-38
BC000364-1|AAH00364.1|  480|Homo sapiens uridine monophosphate s...   156   8e-38
AY691629-1|AAT85801.1|  480|Homo sapiens uridine monophosphate s...   156   8e-38
AB062285-1|BAB93468.1|  480|Homo sapiens uridine monophosphate s...   156   8e-38
AB041359-1|BAB20663.1|  480|Homo sapiens UMP synthase protein.        156   8e-38
M36661-1|AAA61256.1|  468|Homo sapiens UMPS protein.                  153   5e-37
D86228-1|BAA19921.1|  480|Homo sapiens UMP synthase protein.          153   8e-37

>J03626-1|AAA61255.1|  480|Homo sapiens UMPS protein.
          Length = 480

 Score =  156 bits (378), Expect = 8e-38
 Identities = 72/171 (42%), Positives = 109/171 (63%)
 Frame = -1

Query: 685 ILEDRKYADIGHTVSLQYSKGLYKIGEWADCVTVHSLPGEGILKALNGSMNCITKGVFLL 506
           I EDRK+ADIG+TV  QY  G++KI  WAD V  H +PG G++K L      + +G  L+
Sbjct: 309 IFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLI 368

Query: 505 AEMSSEGNLITQQYKQETVSMASKYANIITGFVCQNKDTFQNPGLIQLTPGVQLECSKDD 326
           AEMSS G+L T  Y +  V MA +++  + GF+  ++ + + P  + LTPGVQLE   D+
Sbjct: 369 AEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVSMK-PEFLHLTPGVQLEAGGDN 427

Query: 325 FGQIYKTPEKVVVENGADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 173
            GQ Y +P++V+ + G+D+I+VGRGI +A +    A  Y+ A W+ Y+ R+
Sbjct: 428 LGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478


>D86230-1|BAA19923.1|  480|Homo sapiens UMP synthase protein.
          Length = 480

 Score =  156 bits (378), Expect = 8e-38
 Identities = 72/171 (42%), Positives = 109/171 (63%)
 Frame = -1

Query: 685 ILEDRKYADIGHTVSLQYSKGLYKIGEWADCVTVHSLPGEGILKALNGSMNCITKGVFLL 506
           I EDRK+ADIG+TV  QY  G++KI  WAD V  H +PG G++K L      + +G  L+
Sbjct: 309 IFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLI 368

Query: 505 AEMSSEGNLITQQYKQETVSMASKYANIITGFVCQNKDTFQNPGLIQLTPGVQLECSKDD 326
           AEMSS G+L T  Y +  V MA +++  + GF+  ++ + + P  + LTPGVQLE   D+
Sbjct: 369 AEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVSMK-PEFLHLTPGVQLEAGGDN 427

Query: 325 FGQIYKTPEKVVVENGADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 173
            GQ Y +P++V+ + G+D+I+VGRGI +A +    A  Y+ A W+ Y+ R+
Sbjct: 428 LGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478


>D86227-1|BAA19920.1|  480|Homo sapiens UMP synthase protein.
          Length = 480

 Score =  156 bits (378), Expect = 8e-38
 Identities = 72/171 (42%), Positives = 109/171 (63%)
 Frame = -1

Query: 685 ILEDRKYADIGHTVSLQYSKGLYKIGEWADCVTVHSLPGEGILKALNGSMNCITKGVFLL 506
           I EDRK+ADIG+TV  QY  G++KI  WAD V  H +PG G++K L      + +G  L+
Sbjct: 309 IFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLI 368

Query: 505 AEMSSEGNLITQQYKQETVSMASKYANIITGFVCQNKDTFQNPGLIQLTPGVQLECSKDD 326
           AEMSS G+L T  Y +  V MA +++  + GF+  ++ + + P  + LTPGVQLE   D+
Sbjct: 369 AEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVSMK-PEFLHLTPGVQLEAGGDN 427

Query: 325 FGQIYKTPEKVVVENGADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 173
            GQ Y +P++V+ + G+D+I+VGRGI +A +    A  Y+ A W+ Y+ R+
Sbjct: 428 LGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478


>CR456787-1|CAG33068.1|  480|Homo sapiens UMPS protein.
          Length = 480

 Score =  156 bits (378), Expect = 8e-38
 Identities = 72/171 (42%), Positives = 109/171 (63%)
 Frame = -1

Query: 685 ILEDRKYADIGHTVSLQYSKGLYKIGEWADCVTVHSLPGEGILKALNGSMNCITKGVFLL 506
           I EDRK+ADIG+TV  QY  G++KI  WAD V  H +PG G++K L      + +G  L+
Sbjct: 309 IFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLI 368

Query: 505 AEMSSEGNLITQQYKQETVSMASKYANIITGFVCQNKDTFQNPGLIQLTPGVQLECSKDD 326
           AEMSS G+L T  Y +  V MA +++  + GF+  ++ + + P  + LTPGVQLE   D+
Sbjct: 369 AEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVSMK-PEFLHLTPGVQLEAGGDN 427

Query: 325 FGQIYKTPEKVVVENGADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 173
            GQ Y +P++V+ + G+D+I+VGRGI +A +    A  Y+ A W+ Y+ R+
Sbjct: 428 LGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478


>BC007511-1|AAH07511.1|  480|Homo sapiens uridine monophosphate
           synthetase (orotate phosphoribosyl transferase and
           orotid protein.
          Length = 480

 Score =  156 bits (378), Expect = 8e-38
 Identities = 72/171 (42%), Positives = 109/171 (63%)
 Frame = -1

Query: 685 ILEDRKYADIGHTVSLQYSKGLYKIGEWADCVTVHSLPGEGILKALNGSMNCITKGVFLL 506
           I EDRK+ADIG+TV  QY  G++KI  WAD V  H +PG G++K L      + +G  L+
Sbjct: 309 IFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLI 368

Query: 505 AEMSSEGNLITQQYKQETVSMASKYANIITGFVCQNKDTFQNPGLIQLTPGVQLECSKDD 326
           AEMSS G+L T  Y +  V MA +++  + GF+  ++ + + P  + LTPGVQLE   D+
Sbjct: 369 AEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVSMK-PEFLHLTPGVQLEAGGDN 427

Query: 325 FGQIYKTPEKVVVENGADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 173
            GQ Y +P++V+ + G+D+I+VGRGI +A +    A  Y+ A W+ Y+ R+
Sbjct: 428 LGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478


>BC000364-1|AAH00364.1|  480|Homo sapiens uridine monophosphate
           synthetase (orotate phosphoribosyl transferase and
           orotid protein.
          Length = 480

 Score =  156 bits (378), Expect = 8e-38
 Identities = 72/171 (42%), Positives = 109/171 (63%)
 Frame = -1

Query: 685 ILEDRKYADIGHTVSLQYSKGLYKIGEWADCVTVHSLPGEGILKALNGSMNCITKGVFLL 506
           I EDRK+ADIG+TV  QY  G++KI  WAD V  H +PG G++K L      + +G  L+
Sbjct: 309 IFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLI 368

Query: 505 AEMSSEGNLITQQYKQETVSMASKYANIITGFVCQNKDTFQNPGLIQLTPGVQLECSKDD 326
           AEMSS G+L T  Y +  V MA +++  + GF+  ++ + + P  + LTPGVQLE   D+
Sbjct: 369 AEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVSMK-PEFLHLTPGVQLEAGGDN 427

Query: 325 FGQIYKTPEKVVVENGADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 173
            GQ Y +P++V+ + G+D+I+VGRGI +A +    A  Y+ A W+ Y+ R+
Sbjct: 428 LGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478


>AY691629-1|AAT85801.1|  480|Homo sapiens uridine monophosphate
           synthetase (orotate phosphoribosyl transferase and
           orotid protein.
          Length = 480

 Score =  156 bits (378), Expect = 8e-38
 Identities = 72/171 (42%), Positives = 109/171 (63%)
 Frame = -1

Query: 685 ILEDRKYADIGHTVSLQYSKGLYKIGEWADCVTVHSLPGEGILKALNGSMNCITKGVFLL 506
           I EDRK+ADIG+TV  QY  G++KI  WAD V  H +PG G++K L      + +G  L+
Sbjct: 309 IFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLI 368

Query: 505 AEMSSEGNLITQQYKQETVSMASKYANIITGFVCQNKDTFQNPGLIQLTPGVQLECSKDD 326
           AEMSS G+L T  Y +  V MA +++  + GF+  ++ + + P  + LTPGVQLE   D+
Sbjct: 369 AEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVSMK-PEFLHLTPGVQLEAGGDN 427

Query: 325 FGQIYKTPEKVVVENGADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 173
            GQ Y +P++V+ + G+D+I+VGRGI +A +    A  Y+ A W+ Y+ R+
Sbjct: 428 LGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478


>AB062285-1|BAB93468.1|  480|Homo sapiens uridine monophosphate
           synthetase protein.
          Length = 480

 Score =  156 bits (378), Expect = 8e-38
 Identities = 72/171 (42%), Positives = 109/171 (63%)
 Frame = -1

Query: 685 ILEDRKYADIGHTVSLQYSKGLYKIGEWADCVTVHSLPGEGILKALNGSMNCITKGVFLL 506
           I EDRK+ADIG+TV  QY  G++KI  WAD V  H +PG G++K L      + +G  L+
Sbjct: 309 IFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLI 368

Query: 505 AEMSSEGNLITQQYKQETVSMASKYANIITGFVCQNKDTFQNPGLIQLTPGVQLECSKDD 326
           AEMSS G+L T  Y +  V MA +++  + GF+  ++ + + P  + LTPGVQLE   D+
Sbjct: 369 AEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVSMK-PEFLHLTPGVQLEAGGDN 427

Query: 325 FGQIYKTPEKVVVENGADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 173
            GQ Y +P++V+ + G+D+I+VGRGI +A +    A  Y+ A W+ Y+ R+
Sbjct: 428 LGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478


>AB041359-1|BAB20663.1|  480|Homo sapiens UMP synthase protein.
          Length = 480

 Score =  156 bits (378), Expect = 8e-38
 Identities = 72/171 (42%), Positives = 109/171 (63%)
 Frame = -1

Query: 685 ILEDRKYADIGHTVSLQYSKGLYKIGEWADCVTVHSLPGEGILKALNGSMNCITKGVFLL 506
           I EDRK+ADIG+TV  QY  G++KI  WAD V  H +PG G++K L      + +G  L+
Sbjct: 309 IFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLI 368

Query: 505 AEMSSEGNLITQQYKQETVSMASKYANIITGFVCQNKDTFQNPGLIQLTPGVQLECSKDD 326
           AEMSS G+L T  Y +  V MA +++  + GF+  ++ + + P  + LTPGVQLE   D+
Sbjct: 369 AEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVSMK-PEFLHLTPGVQLEAGGDN 427

Query: 325 FGQIYKTPEKVVVENGADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 173
            GQ Y +P++V+ + G+D+I+VGRGI +A +    A  Y+ A W+ Y+ R+
Sbjct: 428 LGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478


>M36661-1|AAA61256.1|  468|Homo sapiens UMPS protein.
          Length = 468

 Score =  153 bits (372), Expect = 5e-37
 Identities = 71/171 (41%), Positives = 108/171 (63%)
 Frame = -1

Query: 685 ILEDRKYADIGHTVSLQYSKGLYKIGEWADCVTVHSLPGEGILKALNGSMNCITKGVFLL 506
           I EDRK+ADIG+TV  QY  G++KI  WAD V  H +PG G++K L      + +G  L+
Sbjct: 297 IFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLI 356

Query: 505 AEMSSEGNLITQQYKQETVSMASKYANIITGFVCQNKDTFQNPGLIQLTPGVQLECSKDD 326
           AEMSS G+  T  Y +  V MA +++  + GF+  ++ + + P  + LTPGVQLE   D+
Sbjct: 357 AEMSSTGSQATGDYTRAAVRMAEEHSEFVVGFISGSRVSMK-PEFLHLTPGVQLEAGGDN 415

Query: 325 FGQIYKTPEKVVVENGADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 173
            GQ Y +P++V+ + G+D+I+VGRGI +A +    A  Y+ A W+ Y+ R+
Sbjct: 416 LGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 466


>D86228-1|BAA19921.1|  480|Homo sapiens UMP synthase protein.
          Length = 480

 Score =  153 bits (370), Expect = 8e-37
 Identities = 71/171 (41%), Positives = 108/171 (63%)
 Frame = -1

Query: 685 ILEDRKYADIGHTVSLQYSKGLYKIGEWADCVTVHSLPGEGILKALNGSMNCITKGVFLL 506
           I EDRK+ADIG+TV  QY  G++KI  WAD V  H +PG G++K L      + +G  L+
Sbjct: 309 IFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLI 368

Query: 505 AEMSSEGNLITQQYKQETVSMASKYANIITGFVCQNKDTFQNPGLIQLTPGVQLECSKDD 326
           AEMSS G+L T  Y +  V MA +++  + GF+  ++ + + P  + LTPGVQLE   D+
Sbjct: 369 AEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVSMK-PEFLHLTPGVQLEAGGDN 427

Query: 325 FGQIYKTPEKVVVENGADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 173
             Q Y +P++V+ + G+D+I+VGRGI +A +    A  Y+ A W+ Y+ R+
Sbjct: 428 LRQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,265,047
Number of Sequences: 237096
Number of extensions: 2059250
Number of successful extensions: 3783
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3772
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)