Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13j13
(720 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY236870-1|AAP41817.1| 701|Homo sapiens MUC19 protein. 39 0.021
AK093065-1|BAC04041.1| 280|Homo sapiens protein ( Homo sapiens ... 38 0.027
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 38 0.027
Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein. 38 0.048
AJ298319-1|CAC83676.1| 372|Homo sapiens mucin 5 protein. 35 0.25
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 35 0.34
X63454-1|CAA45054.1| 198|Homo sapiens hst-2 (FGF-6) protein. 34 0.59
X57075-3|CAA40360.1| 82|Homo sapiens FGF6 protein. 34 0.59
X57075-2|CAA40359.1| 105|Homo sapiens FGF6 protein. 34 0.59
X57075-1|CAA40358.1| 115|Homo sapiens FGF6 protein. 34 0.59
BC121098-1|AAI21099.1| 208|Homo sapiens fibroblast growth facto... 34 0.59
BC121097-1|AAI21098.1| 208|Homo sapiens fibroblast growth facto... 34 0.59
AY581424-1|AAS79318.1| 208|Homo sapiens fibroblast growth facto... 34 0.59
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 33 0.78
S83341-1|AAB50777.1| 81|Homo sapiens prion protein protein. 32 2.4
S80539-1|AAB21334.1| 97|Homo sapiens PrP amyloid protein. 32 2.4
S79978-1|AAB35416.1| 89|Homo sapiens prion protein protein. 32 2.4
AY458651-1|AAR21603.1| 277|Homo sapiens prion protein protein. 32 2.4
AF085477-1|AAC62750.2| 285|Homo sapiens prion protein precursor... 32 2.4
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 31 4.1
Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein. 31 5.5
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 31 5.5
BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1, ... 30 9.6
BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1 r... 30 9.6
BC104023-1|AAI04024.1| 403|Homo sapiens TSGA10IP protein protein. 30 9.6
BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein. 30 9.6
AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1, ... 30 9.6
AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1, ... 30 9.6
AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase nu... 30 9.6
AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1, ... 30 9.6
AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein. 30 9.6
AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1, ... 30 9.6
>AY236870-1|AAP41817.1| 701|Homo sapiens MUC19 protein.
Length = 701
Score = 38.7 bits (86), Expect = 0.021
Identities = 30/101 (29%), Positives = 43/101 (42%)
Frame = +1
Query: 370 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVAL 549
G T GS + T+ P ++ T T +A + +TG T G S T +TGVAL
Sbjct: 102 GSMTTALGSQLSSSQTVIPGSSGTISHTTVAPGSSVTGTTTGASDDQVTGSKTGTTGVAL 161
Query: 550 AASLMLIRMWTRGVSCPGTRGPTWTGDGTMGASTRAGPTSG 672
+ ++ T + G T G T GA+TR G
Sbjct: 162 STTVAPGSSSTEATTSTGVHRTTVVGQKT-GATTRGSAKQG 201
>AK093065-1|BAC04041.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ35746 fis, clone TESTI2004399, moderately
similar to APOMUCIN. ).
Length = 280
Score = 38.3 bits (85), Expect = 0.027
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = +1
Query: 382 TMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVALAASL 561
T GS + T+ P ++ T T +A + +TG T G S T +TGVAL+ ++
Sbjct: 3 TALGSQLSSSQTVIPGSSGTISHTTVAPGSSVTGTTTGASDDQVTGSKTGTTGVALSTTV 62
Query: 562 MLIRMWTRGVSCPGTRGPTWTGDGTMGASTRAGPTSG 672
T + G T G T GA+TR G
Sbjct: 63 APGSSSTEATTSTGVHRTTVVGQKT-GATTRGSAKQG 98
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 38.3 bits (85), Expect = 0.027
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Frame = +1
Query: 373 LGATMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVALA 552
L T S T T P+ + T T SA T T+ ++ S T ST A
Sbjct: 337 LVTTSTTSTPQTSTTSAPTTSTTSAPTTSTTSAPTTSTTSTPQTSIS-SAPTSSTTSAPT 395
Query: 553 ASLMLIRMWTRGVSCPGTR---GPTWTGDGTMGASTRAGPTSGLSXCPRLAGTAAATAN 720
+S + R T +S P T PT + ST + PTS + P+ + T+AAT++
Sbjct: 396 SSTISART-TSIISAPTTSTTSSPTTSTTSATTTSTTSAPTSSTTSTPQTSKTSAATSS 453
Score = 31.5 bits (68), Expect = 3.1
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 1/118 (0%)
Frame = +1
Query: 370 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMITGET-AGFSSTFDCSGSTLSTGVA 546
G G T + T T T P+ + T T SA T T A +ST S ++ ++G+
Sbjct: 39 GPGTTPSPVPT-TSTTSAPTTSTTSAATTSTISAPTTSTTSAPTTSTTSASTASKTSGLG 97
Query: 547 LAASLMLIRMWTRGVSCPGTRGPTWTGDGTMGASTRAGPTSGLSXCPRLAGTAAATAN 720
S + T + T T + G + PT+ PR + T+A+T +
Sbjct: 98 TTPSPIPTTSTTSPPTTSTTSASTASKTSGPGTTPSPVPTTSTIFAPRTSTTSASTTS 155
>Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein.
Length = 477
Score = 37.5 bits (83), Expect = 0.048
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Frame = +1
Query: 373 LGATMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVALA 552
L T S T T P+ + T T SA T T+ ++ S T ST A
Sbjct: 161 LVTTSTTSTPQTSTTSAPTTSTTSAPTTSTTSAPTTSTTSTPQTSIS-SAPTSSTTSAPT 219
Query: 553 ASLMLIRMWTRGVSCPGTRGPTWTGDGTMGA---STRAGPTSGLSXCPRLAGTAAATAN 720
+S + R T +S P T ++ T A ST + PTS + P+ + T+AAT++
Sbjct: 220 SSTISART-TSIISAPTTSTTSFPTTSTTSATTTSTTSAPTSSTTSTPQTSKTSAATSS 277
>AJ298319-1|CAC83676.1| 372|Homo sapiens mucin 5 protein.
Length = 372
Score = 35.1 bits (77), Expect = 0.25
Identities = 37/122 (30%), Positives = 48/122 (39%), Gaps = 9/122 (7%)
Frame = +1
Query: 382 TMAGSATITGATLGPSATITGLGTMMAGSAMITGETAG-------FSSTFDCSGSTLSTG 540
T SA IT GP T + + T SA T T+G +T S T ST
Sbjct: 18 TSTTSAPITSMPSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTSAPTTSTT 77
Query: 541 VALAASLMLIRMWTRGV--SCPGTRGPTWTGDGTMGASTRAGPTSGLSXCPRLAGTAAAT 714
A AS T + T PT + AST +GP + LS P + T+A T
Sbjct: 78 SASTASTTSGPGTTPSPVPTTSTTSAPTTSTTSASTASTTSGPGTSLSPVPTTSTTSAPT 137
Query: 715 AN 720
+
Sbjct: 138 TS 139
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 34.7 bits (76), Expect = 0.34
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Frame = +1
Query: 382 TMAGSATITGATLGPSATITGLGTMMAGSAMITGET-AGFSSTFDCSGSTLSTGVALAAS 558
T SA+ T T G T + + T SA T T A SST + ++ ++G S
Sbjct: 78 TSTTSASTTSTTSGAGTTPSPVPTTSTTSAPTTRTTSAPISSTTSATTTSTTSGPGTTPS 137
Query: 559 LMLIRMWTRGVSCPGTRGPTWTGDGTMGASTRAGPTSGLSXCPRLAGTAAATAN 720
+ T + T GP T S + PT+ + P + T+A T +
Sbjct: 138 PVPTTSTTSAPTTSTTSGPGTTPSAVPTTSITSVPTTSTNSAPISSTTSATTTS 191
Score = 32.7 bits (71), Expect = 1.4
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Frame = +1
Query: 394 SATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGV-ALAASLMLI 570
SAT T T GP T + + T SA T T+G +T +T T V + + I
Sbjct: 122 SATTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSAVPTTSITSVPTTSTNSAPI 181
Query: 571 RMWTRGVSCPGTRGPTWTGDGTMGASTRAGPTSGLSXCP 687
T + GP T AST + T+ + P
Sbjct: 182 SSTTSATTTSRISGPETTPSPVPTASTTSASTTSTTSGP 220
Score = 32.7 bits (71), Expect = 1.4
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Frame = +1
Query: 382 TMAGSATITGATLGPSATITGLGTMMAGSAMITG-ETAGFSSTFDCSGSTLSTGVALAAS 558
T SA T T GP T + + T S T +A SST + ++ +G S
Sbjct: 142 TSTTSAPTTSTTSGPGTTPSAVPTTSITSVPTTSTNSAPISSTTSATTTSRISGPETTPS 201
Query: 559 LMLIRMWTRGVSCPGTRGPTWTGDGTMGASTRAGPTSGLSXCPRLAGTAAATAN 720
+ T + T GP T ST + PT+ + + T+A+T +
Sbjct: 202 PVPTASTTSASTTSTTSGPGTTPSPVPTTSTISVPTTSTTSASTTSTTSASTTS 255
Score = 30.3 bits (65), Expect = 7.3
Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 1/93 (1%)
Frame = +1
Query: 394 SATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVALAASLMLIR 573
SAT T GP T + + T SA T T+G +T +T + V ++
Sbjct: 186 SATTTSRISGPETTPSPVPTASTTSASTTSTTSGPGTTPSPVPTTSTISVPTTSTTSAST 245
Query: 574 MWTRGVSCPG-TRGPTWTGDGTMGASTRAGPTS 669
T S T GP T ST + PT+
Sbjct: 246 TSTTSASTTSTTSGPGTTPSPVPTTSTTSAPTT 278
>X63454-1|CAA45054.1| 198|Homo sapiens hst-2 (FGF-6) protein.
Length = 198
Score = 33.9 bits (74), Expect = 0.59
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 41 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 99
Query: 477 HGRN 488
H N
Sbjct: 100 HEEN 103
>X57075-3|CAA40360.1| 82|Homo sapiens FGF6 protein.
Length = 82
Score = 33.9 bits (74), Expect = 0.59
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 18 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 76
Query: 477 HGRN 488
H N
Sbjct: 77 HEEN 80
>X57075-2|CAA40359.1| 105|Homo sapiens FGF6 protein.
Length = 105
Score = 33.9 bits (74), Expect = 0.59
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 41 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 99
Query: 477 HGRN 488
H N
Sbjct: 100 HEEN 103
>X57075-1|CAA40358.1| 115|Homo sapiens FGF6 protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.59
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 51 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 109
Query: 477 HGRN 488
H N
Sbjct: 110 HEEN 113
>BC121098-1|AAI21099.1| 208|Homo sapiens fibroblast growth factor 6
protein.
Length = 208
Score = 33.9 bits (74), Expect = 0.59
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 51 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 109
Query: 477 HGRN 488
H N
Sbjct: 110 HEEN 113
>BC121097-1|AAI21098.1| 208|Homo sapiens fibroblast growth factor 6
protein.
Length = 208
Score = 33.9 bits (74), Expect = 0.59
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 51 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 109
Query: 477 HGRN 488
H N
Sbjct: 110 HEEN 113
>AY581424-1|AAS79318.1| 208|Homo sapiens fibroblast growth factor 6
protein.
Length = 208
Score = 33.9 bits (74), Expect = 0.59
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 51 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 109
Query: 477 HGRN 488
H N
Sbjct: 110 HEEN 113
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 33.5 bits (73), Expect = 0.78
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Frame = +1
Query: 382 TMAGSATITGATLGPSATITGLGTMMAGSAMITGE-TAGFSSTFDCSGSTLSTGVALAAS 558
T S T GP T + + T SA T +A +ST G+T S + + +
Sbjct: 2290 TSTTSVPTTSTISGPKTTPSPVPTTSTTSAATTSTISAPTTSTTSVPGTTPSPVLTTSTT 2349
Query: 559 LMLIRMWTRGVSCPGTRGPTWTGDGTMGASTRAGPTSGLSXCPRLAGTAAATAN 720
T T GP T ST + PT+ ++ P + T+A T++
Sbjct: 2350 SAPTTRTTSASPAGTTSGPGNTPSPVPTTSTISAPTTSITSAPTTSTTSAPTSS 2403
>S83341-1|AAB50777.1| 81|Homo sapiens prion protein protein.
Length = 81
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 7 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 45
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 15 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 53
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 23 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 61
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 31 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 69
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 39 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 77
>S80539-1|AAB21334.1| 97|Homo sapiens PrP amyloid protein.
Length = 97
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 7 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 45
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 15 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 53
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 23 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 61
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 31 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 69
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 39 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 77
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 47 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 85
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 55 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 93
>S79978-1|AAB35416.1| 89|Homo sapiens prion protein protein.
Length = 89
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 7 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 45
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 15 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 53
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 23 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 61
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 31 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 69
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 39 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 77
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 47 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 85
>AY458651-1|AAR21603.1| 277|Homo sapiens prion protein protein.
Length = 277
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 57 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 95
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 65 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 103
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 73 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 111
>AF085477-1|AAC62750.2| 285|Homo sapiens prion protein precursor
protein.
Length = 285
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 57 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 95
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 65 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 103
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 73 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 111
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413
W + H G HGG G W + H GG H G
Sbjct: 81 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 119
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 31.1 bits (67), Expect = 4.1
Identities = 32/113 (28%), Positives = 45/113 (39%)
Frame = +1
Query: 382 TMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVALAASL 561
T SA+ T T GP T + + T SA T T+ +T S T ST A S
Sbjct: 21 TSTTSASTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSA-PTTSTTSAPTTSTPSAPTTST 79
Query: 562 MLIRMWTRGVSCPGTRGPTWTGDGTMGASTRAGPTSGLSXCPRLAGTAAATAN 720
L PT + ST + PTS + P+ + T+A+T +
Sbjct: 80 TL--------------APTTSTTSAPTTSTTSTPTSSTTSTPQTSTTSASTTS 118
>Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 30.7 bits (66), Expect = 5.5
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 306 GHNGRVSHDHGGHQGH-VTNVHWARGHN--GGVSHDHRGYTRSLGNNYRARYYDGRISND 476
GH HGG GH + +V RGH+ G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRLHDVPGHRGHDHRGQPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 477 HG 482
HG
Sbjct: 902 HG 903
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 30.7 bits (66), Expect = 5.5
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 4/115 (3%)
Frame = +1
Query: 382 TMAGSATITGATLGPSAT--ITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVALAA 555
T A + T TG+T PS+T T + ++ +A T+ + G+T + V
Sbjct: 39 TTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSNTVTPSSALGTTHTPPVPNTT 98
Query: 556 SLMLIRMWTRGVSCPGTRGPTWTG--DGTMGASTRAGPTSGLSXCPRLAGTAAAT 714
+ R + S P T WT GT+G + P++G S P A T T
Sbjct: 99 ATTHGR--SLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTP--AATTGTT 149
>BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +3
Query: 306 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 476
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 477 HG 482
HG
Sbjct: 902 HG 903
>BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +3
Query: 306 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 476
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 477 HG 482
HG
Sbjct: 902 HG 903
>BC104023-1|AAI04024.1| 403|Homo sapiens TSGA10IP protein protein.
Length = 403
Score = 29.9 bits (64), Expect = 9.6
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +1
Query: 370 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVAL 549
GLGA AG A A GP T G + GS E + G+ AL
Sbjct: 343 GLGAAAAGGAAAGRAAAGPDTACTAAGGPLPGSLRTQREPGPWGGPAQAGGAEAPGATAL 402
>BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein.
Length = 940
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +3
Query: 306 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 476
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 477 HG 482
HG
Sbjct: 902 HG 903
>AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +3
Query: 306 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 476
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 477 HG 482
HG
Sbjct: 902 HG 903
>AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +3
Query: 306 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 476
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 477 HG 482
HG
Sbjct: 902 HG 903
>AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase nuclear
targeting subunit protein.
Length = 940
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +3
Query: 306 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 476
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 477 HG 482
HG
Sbjct: 902 HG 903
>AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +3
Query: 306 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 476
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 477 HG 482
HG
Sbjct: 902 HG 903
>AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +3
Query: 306 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 476
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 477 HG 482
HG
Sbjct: 902 HG 903
>AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +3
Query: 306 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 476
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 477 HG 482
HG
Sbjct: 902 HG 903
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,665,583
Number of Sequences: 237096
Number of extensions: 1304889
Number of successful extensions: 8640
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 7959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8544
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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