Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13h16
(262 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036373-1|AAH36373.1| 408|Homo sapiens glyceraldehyde-3-phosph... 40 0.001
AJ005371-1|CAA06501.1| 408|Homo sapiens Glyceraldehyde-3-phosph... 40 0.001
AF216641-1|AAF87970.1| 408|Homo sapiens spermatogenic cell-spec... 40 0.001
AC002389-1|AAB64181.1| 417|Homo sapiens GAPDH-2 like protein. 40 0.001
X01677-1|CAA25833.1| 335|Homo sapiens glyceraldehyde-3-phosphat... 36 0.018
M33197-1|AAA52518.1| 335|Homo sapiens GAPD protein. 36 0.018
M28283-1|AAA52519.1| 44|Homo sapiens glyceraldehyde 3-phosphat... 36 0.018
M17851-1|AAA86283.1| 335|Homo sapiens glyceraldehyde-3-phosphat... 36 0.018
J04038-1|AAA53191.1| 335|Homo sapiens GAPD protein. 36 0.018
J02642-1|AAA52496.1| 335|Homo sapiens GAPD protein. 36 0.018
CR407671-1|CAG28599.1| 335|Homo sapiens GAPD protein. 36 0.018
BT006893-1|AAP35539.1| 335|Homo sapiens glyceraldehyde-3-phosph... 36 0.018
BC083511-1|AAH83511.1| 335|Homo sapiens glyceraldehyde-3-phosph... 36 0.018
BC029618-1|AAH29618.1| 335|Homo sapiens glyceraldehyde-3-phosph... 36 0.018
BC026907-1|AAH26907.1| 335|Homo sapiens glyceraldehyde-3-phosph... 36 0.018
BC025925-1|AAH25925.1| 335|Homo sapiens glyceraldehyde-3-phosph... 36 0.018
BC023632-1|AAH23632.1| 335|Homo sapiens glyceraldehyde-3-phosph... 36 0.018
BC013310-1|AAH13310.1| 335|Homo sapiens glyceraldehyde-3-phosph... 36 0.018
BC009081-1|AAH09081.1| 335|Homo sapiens glyceraldehyde-3-phosph... 36 0.018
BC004109-1|AAH04109.1| 335|Homo sapiens glyceraldehyde-3-phosph... 36 0.018
BC001601-1|AAH01601.1| 335|Homo sapiens glyceraldehyde-3-phosph... 36 0.018
AY633612-1|AAV33305.1| 335|Homo sapiens aging-associated gene 9... 36 0.018
AY340484-1|AAP88932.1| 335|Homo sapiens glyceraldehyde-3-phosph... 36 0.018
AY007133-1|AAG01996.1| 335|Homo sapiens protein ( Homo sapiens ... 36 0.018
AF261085-1|AAF99678.1| 335|Homo sapiens glyceraldehyde-3-phosph... 36 0.018
AB062273-1|BAB93466.1| 335|Homo sapiens glyceraldehyde-3-phosph... 36 0.018
X53778-1|CAA37794.1| 331|Homo sapiens uracil DNA glycosylase pr... 31 0.50
>BC036373-1|AAH36373.1| 408|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase, spermatogenic protein.
Length = 408
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNEYGYS RV+DL++Y+ S+D
Sbjct: 386 YDNEYGYSHRVVDLLRYMFSRD 407
>AJ005371-1|CAA06501.1| 408|Homo sapiens Glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 408
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNEYGYS RV+DL++Y+ S+D
Sbjct: 386 YDNEYGYSHRVVDLLRYMFSRD 407
>AF216641-1|AAF87970.1| 408|Homo sapiens spermatogenic
cell-specific glyceraldehyde 3-phosphate dehydrogenase-2
protein.
Length = 408
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNEYGYS RV+DL++Y+ S+D
Sbjct: 386 YDNEYGYSHRVVDLLRYMFSRD 407
>AC002389-1|AAB64181.1| 417|Homo sapiens GAPDH-2 like protein.
Length = 417
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNEYGYS RV+DL++Y+ S+D
Sbjct: 395 YDNEYGYSHRVVDLLRYMFSRD 416
>X01677-1|CAA25833.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>M33197-1|AAA52518.1| 335|Homo sapiens GAPD protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>M28283-1|AAA52519.1| 44|Homo sapiens glyceraldehyde 3-phosphate
dehydrogenase protein.
Length = 44
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 23 YDNEFGYSNRVVDLMAHMASKE 44
>M17851-1|AAA86283.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>J04038-1|AAA53191.1| 335|Homo sapiens GAPD protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>J02642-1|AAA52496.1| 335|Homo sapiens GAPD protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>CR407671-1|CAG28599.1| 335|Homo sapiens GAPD protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>BT006893-1|AAP35539.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>BC083511-1|AAH83511.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>BC029618-1|AAH29618.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>BC026907-1|AAH26907.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>BC025925-1|AAH25925.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>BC023632-1|AAH23632.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>BC013310-1|AAH13310.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>BC009081-1|AAH09081.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>BC004109-1|AAH04109.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>BC001601-1|AAH01601.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>AY633612-1|AAV33305.1| 335|Homo sapiens aging-associated gene 9
protein protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>AY340484-1|AAP88932.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>AY007133-1|AAG01996.1| 335|Homo sapiens protein ( Homo sapiens
clone CDABP0047 mRNA sequence. ).
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>AF261085-1|AAF99678.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>AB062273-1|BAB93466.1| 335|Homo sapiens glyceraldehyde-3-phosphate
dehydrogenase protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLIKYIQSKD 195
YDNE+GYS+RV+DL+ ++ SK+
Sbjct: 314 YDNEFGYSNRVVDLMAHMASKE 335
>X53778-1|CAA37794.1| 331|Homo sapiens uracil DNA glycosylase
protein.
Length = 331
Score = 31.5 bits (68), Expect = 0.50
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = -3
Query: 260 YDNEYGYSSRVIDLI 216
YDNE+GYS+RV+DL+
Sbjct: 313 YDNEFGYSNRVVDLM 327
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,163,056
Number of Sequences: 237096
Number of extensions: 348145
Number of successful extensions: 451
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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