Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt13g04
         (642 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L31573-1|AAA74886.1|  488|Homo sapiens sulfite oxidase protein.        98   2e-20
BC065193-1|AAH65193.2|  545|Homo sapiens sulfite oxidase protein.      98   2e-20
AY056018-1|AAL08048.1|  488|Homo sapiens sulfite oxidase protein.      98   2e-20

>L31573-1|AAA74886.1|  488|Homo sapiens sulfite oxidase protein.
          Length = 488

 Score = 98.3 bits (234), Expect = 2e-20
 Identities = 41/93 (44%), Positives = 59/93 (63%)
 Frame = -2

Query: 641 YSGGGAKIVRVDVSADGGRSWWEARELQADAAPPQQHYGWTLWTASVPVATQQKEVELWA 462
           +SGGG  ++RVDVS DGG +W  A+ L  +   P++ + W LW    PV   QKE+ +  
Sbjct: 393 WSGGGRAVIRVDVSLDGGLTWQVAK-LDGEEQRPRKAWAWRLWQLKAPVPAGQKELNIVC 451

Query: 461 KATDSNFNTQPERFNDIWNIRGILSNAYHRIKI 363
           KA D  +N QP+    IWN+RG+LSNA+HR+ +
Sbjct: 452 KAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHV 484


>BC065193-1|AAH65193.2|  545|Homo sapiens sulfite oxidase protein.
          Length = 545

 Score = 98.3 bits (234), Expect = 2e-20
 Identities = 41/93 (44%), Positives = 59/93 (63%)
 Frame = -2

Query: 641 YSGGGAKIVRVDVSADGGRSWWEARELQADAAPPQQHYGWTLWTASVPVATQQKEVELWA 462
           +SGGG  ++RVDVS DGG +W  A+ L  +   P++ + W LW    PV   QKE+ +  
Sbjct: 450 WSGGGRAVIRVDVSLDGGLTWQVAK-LDGEEQRPRKAWAWRLWQLKAPVPAGQKELNIVC 508

Query: 461 KATDSNFNTQPERFNDIWNIRGILSNAYHRIKI 363
           KA D  +N QP+    IWN+RG+LSNA+HR+ +
Sbjct: 509 KAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHV 541


>AY056018-1|AAL08048.1|  488|Homo sapiens sulfite oxidase protein.
          Length = 488

 Score = 98.3 bits (234), Expect = 2e-20
 Identities = 41/93 (44%), Positives = 59/93 (63%)
 Frame = -2

Query: 641 YSGGGAKIVRVDVSADGGRSWWEARELQADAAPPQQHYGWTLWTASVPVATQQKEVELWA 462
           +SGGG  ++RVDVS DGG +W  A+ L  +   P++ + W LW    PV   QKE+ +  
Sbjct: 393 WSGGGRAVIRVDVSLDGGLTWQVAK-LDGEEQRPRKAWAWRLWQLKAPVPAGQKELNIVC 451

Query: 461 KATDSNFNTQPERFNDIWNIRGILSNAYHRIKI 363
           KA D  +N QP+    IWN+RG+LSNA+HR+ +
Sbjct: 452 KAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHV 484


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,044,417
Number of Sequences: 237096
Number of extensions: 1210756
Number of successful extensions: 2337
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2334
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)