Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13f24
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81592-5|CAB04727.1| 434|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z81592-3|CAB04729.2| 389|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z81592-4|CAB04728.1| 436|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 52 5e-07
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 52 5e-07
AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF099920-6|AAQ01531.1| 388|Caenorhabditis elegans Hypothetical ... 48 1e-05
AF067943-8|AAO12414.1| 428|Caenorhabditis elegans Hypothetical ... 47 1e-05
AL021346-2|CAB63233.1| 419|Caenorhabditis elegans Hypothetical ... 45 5e-05
AF099920-7|AAK29842.2| 336|Caenorhabditis elegans Hypothetical ... 44 9e-05
Z81142-10|CAB03503.2| 384|Caenorhabditis elegans Hypothetical p... 42 4e-04
Z68227-15|CAJ80810.1| 414|Caenorhabditis elegans Hypothetical p... 42 6e-04
Z68227-14|CAJ80809.1| 448|Caenorhabditis elegans Hypothetical p... 42 6e-04
Z68227-13|CAA92511.1| 444|Caenorhabditis elegans Hypothetical p... 42 6e-04
Z92827-1|CAB07326.1| 394|Caenorhabditis elegans Hypothetical pr... 41 9e-04
U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical p... 41 9e-04
Z74038-6|CAA98496.1| 423|Caenorhabditis elegans Hypothetical pr... 40 0.001
U41995-6|AAA83463.2| 419|Caenorhabditis elegans Hypothetical pr... 39 0.003
U41995-8|AAN84829.1| 350|Caenorhabditis elegans Hypothetical pr... 36 0.042
U41995-7|AAP68946.1| 405|Caenorhabditis elegans Hypothetical pr... 36 0.042
Z92827-2|CAB07327.2| 394|Caenorhabditis elegans Hypothetical pr... 35 0.056
U80024-4|AAK18888.1| 436|Caenorhabditis elegans Hypothetical pr... 35 0.056
U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical pr... 33 0.30
U41995-11|AAA83467.1| 665|Caenorhabditis elegans Hypothetical p... 31 0.69
AL022288-2|CAA18370.1| 338|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81549-1|CAB04466.1| 343|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80219-6|CAI70409.1| 734|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80219-4|CAE17938.1| 745|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80219-1|CAB02301.2| 727|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical p... 29 3.7
Z75546-11|CAI70402.1| 734|Caenorhabditis elegans Hypothetical p... 29 3.7
Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical p... 29 3.7
Z75546-9|CAE17895.1| 745|Caenorhabditis elegans Hypothetical pr... 29 3.7
AC006769-8|AAF60581.1| 431|Caenorhabditis elegans Hypothetical ... 29 4.9
AC006645-1|AAF39843.1| 418|Caenorhabditis elegans Hypothetical ... 29 4.9
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 28 6.4
U29157-1|AAA68423.4| 675|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z70267-7|CAA94215.1| 303|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z68003-7|CAA91980.1| 303|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z46242-12|CAA86332.1| 690|Caenorhabditis elegans Hypothetical p... 28 8.5
Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical p... 28 8.5
AF256467-1|AAF71546.1| 690|Caenorhabditis elegans SEL-5B serine... 28 8.5
AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A serine... 28 8.5
AC006617-8|AAF39772.2| 309|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z81592-5|CAB04727.1| 434|Caenorhabditis elegans Hypothetical
protein T16G1.5 protein.
Length = 434
Score = 58.4 bits (135), Expect = 5e-09
Identities = 30/77 (38%), Positives = 41/77 (53%)
Frame = -3
Query: 517 NVLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHET 338
NVL+H DLWA NI++K D N + +IDYQ I P D++ T S + RQ H
Sbjct: 273 NVLVHGDLWAANILWKENDGNCVASKVIDYQLIHMGNPAEDLVRVFLSTLSGADRQAHWE 332
Query: 337 GIFEHYYTIFSKHLNEN 287
+ E +Y F + L N
Sbjct: 333 KLLEQFYEYFLEALEGN 349
>Z81592-3|CAB04729.2| 389|Caenorhabditis elegans Hypothetical
protein T16G1.3 protein.
Length = 389
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/134 (30%), Positives = 64/134 (47%)
Frame = -3
Query: 517 NVLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHET 338
NVL+H DLW+ NIM+K IIDYQ I P D++ T S S RQ++
Sbjct: 235 NVLVHGDLWSANIMWKENKDEFRVDKIIDYQSIHLGNPAEDLVRLFISTLSGSERQKYWE 294
Query: 337 GIFEHYYTIFSKHLNENTKLRLKRIGYNWEEFLKSCENSRMFGIFQALGICPYILLDPKT 158
+ E +Y F + L + K + Y E+ LK E+ R++ + +L + P +
Sbjct: 295 KLLEQFYEYFIEALED------KNVPYTLEQ-LK--ESYRLYFVTGSLLMLPMFGPIAEV 345
Query: 157 AAATFDDPETFQKH 116
A DP+ +K+
Sbjct: 346 KLAEMSDPDEVKKY 359
>Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical
protein T16G1.6 protein.
Length = 431
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/77 (35%), Positives = 41/77 (53%)
Frame = -3
Query: 517 NVLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHET 338
+VL+H DLWA NI++ D + + +IDYQ I P D++ T S + RQ H
Sbjct: 271 DVLVHGDLWAANILWNENDGKFSASKVIDYQIIHMGNPAEDLVRVFLCTLSGADRQAHWE 330
Query: 337 GIFEHYYTIFSKHLNEN 287
+ E +Y F + L +N
Sbjct: 331 KLLEQFYEYFLEALEDN 347
>Z81592-4|CAB04728.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.4 protein.
Length = 436
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = -3
Query: 517 NVLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHET 338
+VL+H DLW+ NI+++ + + +IDYQ I P D++ L T S + RQ H
Sbjct: 272 DVLVHGDLWSANILWEENEGKFLVSKVIDYQLIHMGNPAEDLVRLLLCTLSGADRQAHWE 331
Query: 337 GIFEHYYTIFSKHLNEN-TKLRLKRIGYNWEEF 242
+ E +Y F + L +N T L+++ ++ ++
Sbjct: 332 RLLEQFYEYFLEALQDNETPYSLEQLKESYRQY 364
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 52.0 bits (119), Expect = 5e-07
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = -3
Query: 517 NVLIHKDLWANNIMFKYE-DCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHE 341
+VL+H DLWA NI++K E D + + +IDYQ I P D++ T S + RQ H
Sbjct: 275 DVLVHGDLWAANILWKEENDGKFSVSKVIDYQLIHMGNPAEDLVRVFLSTLSGADRQAHW 334
Query: 340 TGIFEHYYTIFSKHLNEN 287
+ E +Y F + L ++
Sbjct: 335 ERLLEQFYEYFLEALGDD 352
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = -3
Query: 517 NVLIHKDLWANNIMFKYEDCNPNN-AVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHE 341
+V++H DLWA NI++K +D + + +IDYQ I P D++ T S + RQ H
Sbjct: 274 DVMVHGDLWAANILWKEKDEGTFSVSKVIDYQLIHMGNPAEDLVRLFLSTLSGADRQAHW 333
Query: 340 TGIFEHYYTIFSKHLNEN 287
+ E +YT F L ++
Sbjct: 334 ERLLEKFYTYFLAALGDD 351
>AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical
protein F59B1.8 protein.
Length = 420
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/76 (34%), Positives = 37/76 (48%)
Frame = -3
Query: 514 VLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHETG 335
V+ H DLWA NI++ D ++DYQ P D++ L T S + RQ H
Sbjct: 269 VICHGDLWAANILWTQTDGGFIADKVLDYQESHMGNPAEDLVRLLVSTISGADRQSHWEH 328
Query: 334 IFEHYYTIFSKHLNEN 287
I E +YT F+ + N
Sbjct: 329 ILEQFYTYFTDEIGSN 344
>AF099920-6|AAQ01531.1| 388|Caenorhabditis elegans Hypothetical
protein H06H21.8b protein.
Length = 388
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/103 (21%), Positives = 47/103 (45%)
Frame = -3
Query: 514 VLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHETG 335
++ H DL N+++K + + IIDYQ + + FD++ L L ++ R++
Sbjct: 242 IICHADLNVTNVLWKKDSAKDEISAIIDYQMLFIGSIAFDIIRVLTLGLNREIRRKMTQN 301
Query: 334 IFEHYYTIFSKHLNENTKLRLKRIGYNWEEFLKSCENSRMFGI 206
+HY+ ++ N ++ + + + N +FGI
Sbjct: 302 YLDHYHKTLTELSNGKAPFSMEELLHQYSLIYPFSSNFSLFGI 344
>AF067943-8|AAO12414.1| 428|Caenorhabditis elegans Hypothetical
protein F59B1.10 protein.
Length = 428
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/107 (31%), Positives = 48/107 (44%)
Frame = -3
Query: 616 FSAKYVGLPELENSIVKLFIEACDSLTVVKDGFNVLIHKDLWANNIMFKYEDCNPNNAVI 437
F K + E N I+ F +A + VV NVL H DLWA N ++ + I
Sbjct: 244 FGEKVDRIEEKRNEILD-FEKAFNLNKVVGIKQNVLCHGDLWAANFLWTENNGVFCATRI 302
Query: 436 IDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHETGIFEHYYTIFSKHL 296
+DYQ P D++ L T + + RQ H I E +Y+ F L
Sbjct: 303 VDYQMSHLGNPAEDLVRLLVSTITGADRQAHWQQILEQFYSYFLNEL 349
>AL021346-2|CAB63233.1| 419|Caenorhabditis elegans Hypothetical
protein H37A05.2 protein.
Length = 419
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -3
Query: 514 VLIHKDLWANNIMFKYEDCNPNN-AVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHET 338
VL+H D+W +N++F N +ID+Q S+P DV SK R+ ++
Sbjct: 270 VLMHSDIWPSNLLFSLSSENKLEFKALIDFQTASLSSPGLDVGCLTVTCLSKKDRRTVQS 329
Query: 337 GIFEHYYTIFSKHL 296
I + YY F K L
Sbjct: 330 EILDRYYKSFVKSL 343
>AF099920-7|AAK29842.2| 336|Caenorhabditis elegans Hypothetical
protein H06H21.8a protein.
Length = 336
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/87 (21%), Positives = 42/87 (48%)
Frame = -3
Query: 514 VLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHETG 335
++ H DL N+++K + + IIDYQ + + FD++ L L ++ R++
Sbjct: 242 IICHADLNVTNVLWKKDSAKDEISAIIDYQMLFIGSIAFDIIRVLTLGLNREIRRKMTQN 301
Query: 334 IFEHYYTIFSKHLNENTKLRLKRIGYN 254
+HY+ ++ N ++ + +N
Sbjct: 302 YLDHYHKTLTELSNGKAPFSMEELVWN 328
>Z81142-10|CAB03503.2| 384|Caenorhabditis elegans Hypothetical
protein ZK1037.4 protein.
Length = 384
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/76 (32%), Positives = 36/76 (47%)
Frame = -3
Query: 517 NVLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHET 338
+V+ H DLWA I++ ED N A I+D+Q +P D+ L TS R+
Sbjct: 240 SVICHGDLWAPQILWDKED---NIAGIVDWQATHRGSPMEDLHHILSTCTSVQNRKTFTK 296
Query: 337 GIFEHYYTIFSKHLNE 290
+ +HYY L E
Sbjct: 297 PLLDHYYNKLKVGLKE 312
>Z68227-15|CAJ80810.1| 414|Caenorhabditis elegans Hypothetical
protein F49C12.7c protein.
Length = 414
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = -3
Query: 514 VLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHETG 335
V +H DLW+ NIM+ E + +ID+Q I + D+ + S R ++
Sbjct: 268 VFVHGDLWSANIMWNQEG---HLKKLIDFQMIHFGLAATDLARVMNTCLSPEERHANKEK 324
Query: 334 IFEHYYTIFSKHLNEN 287
+HY+ +KH E+
Sbjct: 325 YLKHYFDCLTKHCKED 340
>Z68227-14|CAJ80809.1| 448|Caenorhabditis elegans Hypothetical
protein F49C12.7b protein.
Length = 448
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = -3
Query: 514 VLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHETG 335
V +H DLW+ NIM+ E + +ID+Q I + D+ + S R ++
Sbjct: 298 VFVHGDLWSANIMWNQEG---HLKKLIDFQMIHFGLAATDLARVMNTCLSPEERHANKEK 354
Query: 334 IFEHYYTIFSKHLNEN 287
+HY+ +KH E+
Sbjct: 355 YLKHYFDCLTKHCKED 370
>Z68227-13|CAA92511.1| 444|Caenorhabditis elegans Hypothetical
protein F49C12.7a protein.
Length = 444
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = -3
Query: 514 VLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHETG 335
V +H DLW+ NIM+ E + +ID+Q I + D+ + S R ++
Sbjct: 298 VFVHGDLWSANIMWNQEG---HLKKLIDFQMIHFGLAATDLARVMNTCLSPEERHANKEK 354
Query: 334 IFEHYYTIFSKHLNEN 287
+HY+ +KH E+
Sbjct: 355 YLKHYFDCLTKHCKED 370
>Z92827-1|CAB07326.1| 394|Caenorhabditis elegans Hypothetical
protein C29F7.1 protein.
Length = 394
Score = 41.1 bits (92), Expect = 9e-04
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Frame = -3
Query: 610 AKYVGLPELENSIVKLFIEACDSLTVVKDGF------NVLIHKDLWANNIMFKYEDCNPN 449
AK GL + I K F + +T D + +VL H DLW+ I++ +D N
Sbjct: 213 AKSPGLEIISKYIEKTFDKDPSFMTKFSDEYLEGKRKSVLTHGDLWSPQILWDKDD---N 269
Query: 448 NAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHETGIFEHYYTIFSKHLNE 290
A IID+Q +P D+ L TS R + + +HY+ S L E
Sbjct: 270 IAGIIDWQVGHQGSPMEDLHRILSTGTSVENRNKLTKPLLDHYFEKLSAGLEE 322
>U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical
protein D1044.1 protein.
Length = 382
Score = 41.1 bits (92), Expect = 9e-04
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = -3
Query: 514 VLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHETG 335
V+ H DL A+N+++ E ID+Q + +FD++ L L S R+ +
Sbjct: 244 VICHNDLNASNVLWNNE--TGKIQAFIDFQHVSKGPVSFDIIRILCLGLSVENRRANTQR 301
Query: 334 IFEHYYTIFSKHLN 293
HYYT F H +
Sbjct: 302 YLNHYYTTFKSHFS 315
>Z74038-6|CAA98496.1| 423|Caenorhabditis elegans Hypothetical
protein F58B4.5 protein.
Length = 423
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = -3
Query: 514 VLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHETG 335
VL H DLW++N + + IID+Q + + P DV S R++
Sbjct: 271 VLTHSDLWSSNFLCTRDGEKVTLKAIIDFQTVSITTPAQDVGRLFASCLSTKDRREKADF 330
Query: 334 IFEHYYTIFSKHLN 293
+ E YY F L+
Sbjct: 331 LLEEYYNTFVNELD 344
>U41995-6|AAA83463.2| 419|Caenorhabditis elegans Hypothetical
protein E02C12.6 protein.
Length = 419
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -3
Query: 514 VLIHKDLWANNIMFKYEDCNP-NNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHET 338
V IH DLW +NIMF ++ IID+Q + P D+ + S R++ T
Sbjct: 268 VFIHGDLWQSNIMFTLDNSKKLKLEAIIDWQSVSRIPPGIDLSRIMLGCLSAQERRERGT 327
Query: 337 GIFEHYYTIFSK 302
+ + Y+ ++K
Sbjct: 328 ELLKLYHETYAK 339
>U41995-8|AAN84829.1| 350|Caenorhabditis elegans Hypothetical
protein E02C12.8a protein.
Length = 350
Score = 35.5 bits (78), Expect = 0.042
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Frame = -3
Query: 607 KYVGLPELENSIVKLFIEACDSLTVVKDGFNVLIHKDLWANNIMFKYEDCNPNNA-VIID 431
K + + E S+VK + D L V VL H DL N++F + N IID
Sbjct: 227 KLITVFEHYKSLVKKYTNISDILGVKL----VLNHGDLSQPNVLFSLDPQNKLKLEAIID 282
Query: 430 YQCIRYSAPTFDVMTFLYLTTSKSFRQQHETGIFEHYYTIFSKHLNE 290
+QC+ P D L S R++ T + + Y+ ++ E
Sbjct: 283 WQCVSRMPPGLDTARLLLGCLSGQERRERGTELLKVYHETYTSVFGE 329
>U41995-7|AAP68946.1| 405|Caenorhabditis elegans Hypothetical
protein E02C12.8c protein.
Length = 405
Score = 35.5 bits (78), Expect = 0.042
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Frame = -3
Query: 607 KYVGLPELENSIVKLFIEACDSLTVVKDGFNVLIHKDLWANNIMFKYEDCNPNNA-VIID 431
K + + E S+VK + D L V VL H DL N++F + N IID
Sbjct: 227 KLITVFEHYKSLVKKYTNISDILGVKL----VLNHGDLSQPNVLFSLDPQNKLKLEAIID 282
Query: 430 YQCIRYSAPTFDVMTFLYLTTSKSFRQQHETGIFEHYYTIFSKHLNE 290
+QC+ P D L S R++ T + + Y+ ++ E
Sbjct: 283 WQCVSRMPPGLDTARLLLGCLSGQERRERGTELLKVYHETYTSVFGE 329
>Z92827-2|CAB07327.2| 394|Caenorhabditis elegans Hypothetical
protein C29F7.2 protein.
Length = 394
Score = 35.1 bits (77), Expect = 0.056
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = -3
Query: 517 NVLIHKDLWANNIMFKYEDCNPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHET 338
+VL H DLWA I++ D N + A IID+Q +P D + TS R+
Sbjct: 250 SVLTHGDLWAPQILW---DKNDDIAGIIDWQITHRGSPMEDFHHIMSTCTSVENRKNLTK 306
Query: 337 GIFEHYYTIFSKHL 296
+ ++Y+ S L
Sbjct: 307 PLLDYYFDKLSSGL 320
>U80024-4|AAK18888.1| 436|Caenorhabditis elegans Hypothetical
protein C18B10.6 protein.
Length = 436
Score = 35.1 bits (77), Expect = 0.056
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = -3
Query: 523 GFNVLI-HKDLWANNIMFKYEDC-NPNNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQ 350
GF+++ H DLW +N++F E+ + +ID+Q + P FD++ S R+
Sbjct: 281 GFHLVPNHGDLWQSNMLFNTEESGHLKLKALIDWQAVANLPPGFDMVRLFIGALSIEDRR 340
Query: 349 QHETGIFEHYYTIFS 305
Q + + Y+ F+
Sbjct: 341 QRASEFLKIYHETFT 355
>U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical protein
ZC53.4 protein.
Length = 1410
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = -3
Query: 307 SKHLNENTKLRLKRIGYNWEEFLKSCENSRMFGIFQALGICPYILLDPKTAAATFDDPET 128
+K+LNE+ ++ +++I N E+F+ N F + + G+ PY +D + FD +
Sbjct: 1042 TKYLNEH-EIEIEKISSNTEKFISFSYNPHQFQLMRKKGVYPYEYMD---SFKRFDKTKL 1097
Query: 127 FQKHNFEDR 101
+ F D+
Sbjct: 1098 PNRDKFYDK 1106
>U41995-11|AAA83467.1| 665|Caenorhabditis elegans Hypothetical
protein E02C12.10 protein.
Length = 665
Score = 31.5 bits (68), Expect = 0.69
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = -3
Query: 616 FSAKYVGLPELENSIVKLFIEACDSLTVVKD--GFN-VLIHKDLWANNIMFKYEDC-NPN 449
+ ++++ E +I++ + T + + GF VL H DLW +N++ ++ N
Sbjct: 229 YGSEHLNTVETSITILRQYRMITKKYTKISELLGFKLVLNHGDLWQSNMLHCLDEFGNLK 288
Query: 448 NAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHETGIFEHYYTIFSKHLNE 290
IID+Q + P D+ L S R++ + + Y+ F++ L +
Sbjct: 289 LKAIIDWQGVSTLPPGLDLSRLLMGCLSAHERRERGLEMLKLYHETFNQVLGK 341
>AL022288-2|CAA18370.1| 338|Caenorhabditis elegans Hypothetical
protein ZK1025.3 protein.
Length = 338
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Frame = -3
Query: 766 FANYETKNILNGRSEYNFYK------QHEHLLNEPTFKDCPWLRAAAKCISDILNTFSAK 605
++NY K L +E N +K +H+ N ++K P A C+ L K
Sbjct: 38 YSNYNDKKPLKEENELNVFKWAPPPVRHDTARNLTSYKSSPLFDAYYNCVYPKLRPLKGK 97
Query: 604 YVGLPELENSIVKLFIEACDSL 539
YV + +S+ E CD+L
Sbjct: 98 YVEFFDEFSSLT----EECDNL 115
>Z81549-1|CAB04466.1| 343|Caenorhabditis elegans Hypothetical
protein F55C9.1 protein.
Length = 343
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 317 IVVLEDSCFVLLPETLRCRQVQKGHDIKRRCRVSYTLVIY 436
I + ED F+ P CR+ + G+DIKR V TL I+
Sbjct: 296 IKITEDDYFIWKP----CREYRGGYDIKRNDGVEATLYIF 331
>Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 505 HKDLWANNIMFKYEDCNPNNAVIIDY 428
H+DL A NI+F +D +P++ I+D+
Sbjct: 564 HRDLTAANILFALKDGDPSSLRIVDF 589
>Z80219-6|CAI70409.1| 734|Caenorhabditis elegans Hypothetical
protein T01H8.1d protein.
Length = 734
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 505 HKDLWANNIMFKYEDCNPNNAVIIDY 428
H+DL A NI+F +D +P++ I+D+
Sbjct: 551 HRDLTAANILFALKDGDPSSLRIVDF 576
>Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 505 HKDLWANNIMFKYEDCNPNNAVIIDY 428
H+DL A NI+F +D +P++ I+D+
Sbjct: 570 HRDLTAANILFALKDGDPSSLRIVDF 595
>Z80219-4|CAE17938.1| 745|Caenorhabditis elegans Hypothetical
protein T01H8.1c protein.
Length = 745
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 505 HKDLWANNIMFKYEDCNPNNAVIIDY 428
H+DL A NI+F +D +P++ I+D+
Sbjct: 531 HRDLTAANILFALKDGDPSSLRIVDF 556
>Z80219-1|CAB02301.2| 727|Caenorhabditis elegans Hypothetical
protein T01H8.1b protein.
Length = 727
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 505 HKDLWANNIMFKYEDCNPNNAVIIDY 428
H+DL A NI+F +D +P++ I+D+
Sbjct: 513 HRDLTAANILFALKDGDPSSLRIVDF 538
>Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 505 HKDLWANNIMFKYEDCNPNNAVIIDY 428
H+DL A NI+F +D +P++ I+D+
Sbjct: 564 HRDLTAANILFALKDGDPSSLRIVDF 589
>Z75546-11|CAI70402.1| 734|Caenorhabditis elegans Hypothetical
protein T01H8.1d protein.
Length = 734
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 505 HKDLWANNIMFKYEDCNPNNAVIIDY 428
H+DL A NI+F +D +P++ I+D+
Sbjct: 551 HRDLTAANILFALKDGDPSSLRIVDF 576
>Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 505 HKDLWANNIMFKYEDCNPNNAVIIDY 428
H+DL A NI+F +D +P++ I+D+
Sbjct: 570 HRDLTAANILFALKDGDPSSLRIVDF 595
>Z75546-9|CAE17895.1| 745|Caenorhabditis elegans Hypothetical
protein T01H8.1c protein.
Length = 745
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 505 HKDLWANNIMFKYEDCNPNNAVIIDY 428
H+DL A NI+F +D +P++ I+D+
Sbjct: 531 HRDLTAANILFALKDGDPSSLRIVDF 556
>AC006769-8|AAF60581.1| 431|Caenorhabditis elegans Hypothetical
protein Y45G12C.4 protein.
Length = 431
Score = 28.7 bits (61), Expect = 4.9
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Frame = -3
Query: 619 TFSAKYVGLPELENSIVKLFIEACDSLTVVKD--GFN-VLIHKDLWANNIMFKY-EDCNP 452
TF AK + E + ++ + S + V + GF VL H DLW +N++ E N
Sbjct: 242 TFGAKNPAVVEECIKLFWIYKNSIKSYSKVSELLGFKLVLNHGDLWQSNMLHCLDEHGNL 301
Query: 451 NNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHETGIFEHYYTIFSKHLNE 290
IID+Q + P D+ L + R++ + Y+ F+ + E
Sbjct: 302 VLKAIIDWQGVSMLPPGLDLARLLMGCLTAYERRERGAELLMLYHQTFTGIVGE 355
>AC006645-1|AAF39843.1| 418|Caenorhabditis elegans Hypothetical
protein F56A4.5 protein.
Length = 418
Score = 28.7 bits (61), Expect = 4.9
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Frame = -3
Query: 619 TFSAKYVGLPELENSIVKLFIEACDSLTVVKD--GFN-VLIHKDLWANNIMFKY-EDCNP 452
TF AK + E + ++ + S + V + GF VL H DLW +N++ E N
Sbjct: 229 TFGAKNPAVVEECIKLFWIYKNSIKSYSKVSELLGFKLVLNHGDLWQSNMLHCLDEHGNL 288
Query: 451 NNAVIIDYQCIRYSAPTFDVMTFLYLTTSKSFRQQHETGIFEHYYTIFSKHLNE 290
IID+Q + P D+ L + R++ + Y+ F+ + E
Sbjct: 289 VLKAIIDWQGVSMLPPGLDLARLLMGCLTAYERRERGAELLMLYHQTFTGIVGE 342
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = -2
Query: 695 LIKRTHF*GLPLASCGRKMYFR--HPKH 618
LI H G L CG K+YF HPKH
Sbjct: 706 LINHRHTIGTVLTLCGWKLYFSIYHPKH 733
>U29157-1|AAA68423.4| 675|Caenorhabditis elegans Hypothetical
protein C34D10.2 protein.
Length = 675
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +2
Query: 194 QSLKNTKHSRVFATLQKFLPVVADSFQSQFGIFI*MLGKN-CIVVLEDSCFVLLPETLRC 370
Q +KN H T P + D + F + G++ V+ED + L C
Sbjct: 140 QCVKNGAHCAFAHTANDIRPPMFDQHEVGFSTVVDGEGRDKTSFVIEDPQWHSQDHVLSC 199
Query: 371 RQVQKGHDIKRRCRVSYTLVIYDNS 445
+ ++ R CR Y Y NS
Sbjct: 200 YKTEQCRKPARLCRQGYACPFYHNS 224
>Z70267-7|CAA94215.1| 303|Caenorhabditis elegans Hypothetical
protein E02H4.6 protein.
Length = 303
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 577 SIVKLFIEACDSLTVVKDGFNVLIHKDLWANNIMFKYEDCNPNNAVIIDY 428
+I+K+ + + L + +IH+DL N+M + + N V+IDY
Sbjct: 116 NIIKIAVRLVNVLEAIHQ--KGVIHRDLKTTNVMIRSRGQSEVNLVLIDY 163
>Z68003-7|CAA91980.1| 303|Caenorhabditis elegans Hypothetical
protein E02H4.6 protein.
Length = 303
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 577 SIVKLFIEACDSLTVVKDGFNVLIHKDLWANNIMFKYEDCNPNNAVIIDY 428
+I+K+ + + L + +IH+DL N+M + + N V+IDY
Sbjct: 116 NIIKIAVRLVNVLEAIHQ--KGVIHRDLKTTNVMIRSRGQSEVNLVLIDY 163
>Z46242-12|CAA86332.1| 690|Caenorhabditis elegans Hypothetical
protein F35G12.3b protein.
Length = 690
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = -3
Query: 580 NSIVKLFIEACDSLTVVKDGFNVLIHKDLWANNIMFKYEDCNPNNAVIIDY 428
+ I+ +F + C++++ + + +IH+DL N++ P + V+ D+
Sbjct: 151 DEILSIFTDLCEAVSFIHNRPQPIIHRDLKVENVLISSH--KPPHYVLCDF 199
>Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical
protein F35G12.3a protein.
Length = 1077
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = -3
Query: 580 NSIVKLFIEACDSLTVVKDGFNVLIHKDLWANNIMFKYEDCNPNNAVIIDY 428
+ I+ +F + C++++ + + +IH+DL N++ P + V+ D+
Sbjct: 151 DEILSIFTDLCEAVSFIHNRPQPIIHRDLKVENVLISSH--KPPHYVLCDF 199
>AF256467-1|AAF71546.1| 690|Caenorhabditis elegans SEL-5B
serine/threonine kinase protein.
Length = 690
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = -3
Query: 580 NSIVKLFIEACDSLTVVKDGFNVLIHKDLWANNIMFKYEDCNPNNAVIIDY 428
+ I+ +F + C++++ + + +IH+DL N++ P + V+ D+
Sbjct: 151 DEILSIFTDLCEAVSFIHNRPQPIIHRDLKVENVLISSH--KPPHYVLCDF 199
>AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A
serine/threonine kinase protein.
Length = 1077
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = -3
Query: 580 NSIVKLFIEACDSLTVVKDGFNVLIHKDLWANNIMFKYEDCNPNNAVIIDY 428
+ I+ +F + C++++ + + +IH+DL N++ P + V+ D+
Sbjct: 151 DEILSIFTDLCEAVSFIHNRPQPIIHRDLKVENVLISSH--KPPHYVLCDF 199
>AC006617-8|AAF39772.2| 309|Caenorhabditis elegans Hypothetical
protein C39B5.9 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 610 AKYVGLPELENSIVKLFIEACDSLTVVK--DGFNVLIHKDLWANNIMFKYE 464
AK + L E + F +A +S+ + + F +IH D W N F++E
Sbjct: 152 AKEITLQECSLLAILPFFDALESIQMFACDEEFEQIIHSDQWKNAKKFRFE 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,938,464
Number of Sequences: 27780
Number of extensions: 363066
Number of successful extensions: 1013
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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