Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13f19
(649 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 69 4e-13
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 64 1e-11
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 62 9e-11
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 59 5e-10
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 52 5e-08
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 52 5e-08
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 46 6e-06
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 40 4e-04
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 39 7e-04
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 38 0.001
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 34 0.015
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 34 0.015
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 29 0.76
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 28 1.0
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 28 1.3
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 28 1.3
SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyce... 27 2.3
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 27 2.3
SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr 2... 26 4.1
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 25 7.1
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 9.4
SPBC691.05c ||SPBP22H7.01c|membrane transporter |Schizosaccharom... 25 9.4
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 25 9.4
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 69.3 bits (162), Expect = 4e-13
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Frame = -1
Query: 640 GIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLL-ESKGXXXXXXXXNGIRSFPG 464
G+ + E S +D ++ +R Y +PH+ + KG + G
Sbjct: 82 GLADDTPFEQLSHESWDHDVSLVLRGNYLTQRYVIPHMAKQGKGGSIVNIGSVNGHIYLG 141
Query: 463 VLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAFLERTK 284
AY+ +KA ++ T+ +A+ P G+RVN PG I + +++ +R K
Sbjct: 142 SPAYSAAKAGLENLTKALAVRYGPLGIRVNVCAPGTIWSPAWDE---RFKKHPDVGDRMK 198
Query: 283 ETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDGG 167
+ +GR G P++VA + FLA S ITG ++ VDGG
Sbjct: 199 RWYPVGRLGTPEDVARAVIFLADSKNSFITGTTLYVDGG 237
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 64.5 bits (150), Expect = 1e-11
Identities = 47/152 (30%), Positives = 75/152 (49%)
Frame = -1
Query: 622 TIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNGIRSFPGVLAYNIS 443
+IE+ Q+D TN+ S +++T A+ H+ +S N P +L Y +
Sbjct: 137 SIEDIDDEQWDLTFKTNIFSFFWVTKAAISHM-KSGSSIVNCSSINAYVGRPDLLDYTST 195
Query: 442 KASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAFLERTKETHALGR 263
K ++ FTR ++ + A G+RVN V PG I T L E+ +E + + LGR
Sbjct: 196 KGAITAFTRGLSNQYAQHGIRVNAVAPGPIYTPLVSSTFPKEK-----IELSDQV-PLGR 249
Query: 262 PGKPDEVAATIAFLASDLASNITGASVPVDGG 167
G+P EVA+ FLA +TG ++ +GG
Sbjct: 250 MGQPVEVASCYLFLACSDGGYMTGQTLHPNGG 281
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 61.7 bits (143), Expect = 9e-11
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Frame = -1
Query: 622 TIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLL-ESKGXXXXXXXXNG-IRSFPGVLA-Y 452
++E+ + + +++ N+ YY A H + KG +G I ++P A Y
Sbjct: 104 SLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLIFTASMSGHIANWPQQWASY 163
Query: 451 NISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAFLERTKETHA 272
+ +KA+V R +A+E AP RVN V+PG I T+L ++E ++ KE
Sbjct: 164 HATKAAVKHLARALAVEWAPFA-RVNSVSPGYIDTDLTL---YADENLR---KKWKEYTP 216
Query: 271 LGRPGKPDEVAATIAFLASDLASNITGASVPVDGG 167
R G PDE+ +LASD +S TG+ + VDGG
Sbjct: 217 QARIGLPDELPGAYLYLASDASSYCTGSDIIVDGG 251
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 59.3 bits (137), Expect = 5e-10
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Frame = -1
Query: 640 GIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXN-----GIR 476
G++++ TS + D ++ TN+ S L+ +A+ +K N
Sbjct: 84 GVLQSSLCVRTSEKEIDSIICTNLVSAIKLSKMAILEWFRNKNSERDRLILNISSRLSTY 143
Query: 475 SFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAFL 296
+ PG Y SKA ++ FT+ +A E+A KG+RVN ++PG + T + LS Q A
Sbjct: 144 ALPGTSVYAASKAGLESFTKVLAAEVASKGIRVNAISPGYVDTPM-----LS-SQIRAIA 197
Query: 295 ERTKETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDGG 167
E+ +GR DE+ FL + + TG +P+ GG
Sbjct: 198 EKKV---PIGRLASTDEIVDACTFLLDNRYT--TGTILPITGG 235
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 52.4 bits (120), Expect = 5e-08
Identities = 35/97 (36%), Positives = 52/97 (53%)
Frame = -1
Query: 457 AYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAFLERTKET 278
AYN SKA V Q + +A+E K RVNCV+PG +++ GG +++ +
Sbjct: 171 AYNTSKAGVIQLIKSLAVEWR-KFARVNCVSPGYTTSDMT--GGKFHKEWEPYTP----- 222
Query: 277 HALGRPGKPDEVAATIAFLASDLASNITGASVPVDGG 167
R G E+A+ +LASD AS +G ++ VDGG
Sbjct: 223 --FERNGLAKEIASAYLYLASDAASYASGTNLIVDGG 257
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 52.4 bits (120), Expect = 5e-08
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Frame = -1
Query: 640 GIIET-GTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNGIRSFPG 464
G++E I + + ++ +L + N S+ A+PHL ++KG +R FP
Sbjct: 87 GVLEPIAKIADADINEWRKLFDINFFSVVETVKYAIPHLRKTKGTIVIVSSGAAVRVFPA 146
Query: 463 VLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQ---RRGGLSEEQYAAFLE 293
AY SKA+++ + E P + V V PGV+ T +Q R E
Sbjct: 147 WAAYCCSKAAINMLVMNLGSE-EPDIMSV-AVRPGVVDTPMQVSIRNDSNKEAMGGDTHN 204
Query: 292 RTKETHALGRPGKPDEVAATIAFLASDLASNITGASV 182
KE G+ P ++A ++FLA + +TG V
Sbjct: 205 FFKELKTSGQLVAPQDIAKALSFLALNNNPKLTGQFV 241
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 45.6 bits (103), Expect = 6e-06
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Frame = -1
Query: 598 QYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNG----IRSFPGVLAYNISKASV 431
+++++MN N S+Y + + + + +G + + + + AY SKA+V
Sbjct: 121 EFEKVMNINTNSVYRVAYY-MGKIFKKQGFGNLIATASMSATIVNAPQHIAAYCASKAAV 179
Query: 430 DQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSE-EQYAAFLERTKETHALGRPGK 254
Q + +A+E A + R+N V+PG T++ L + E Y F R G
Sbjct: 180 RQLCKALAVEWA-EFARINSVSPGYFATDMPGYEFLKQWEPYVPFK----------RLGL 228
Query: 253 PDEVAATIAFLASDLASNITGASVPVDGG 167
E+ T +LAS+ +S +TG + VDGG
Sbjct: 229 TPELRGTYLYLASNASSFVTGLDLIVDGG 257
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 39.5 bits (88), Expect = 4e-04
Identities = 22/86 (25%), Positives = 41/86 (47%)
Frame = -1
Query: 589 RLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNGIRSFPGVLAYNISKASVDQFTRCV 410
++M+ N + + L+ +KG F AYN SKA++ ++ +
Sbjct: 103 KVMDVNFYGVIRMNKAFQHQLIRAKGTIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTL 162
Query: 409 ALELAPKGVRVNCVNPGVILTELQRR 332
+ELAP GV+V + G + T++Q +
Sbjct: 163 RIELAPFGVQVTSIMTGGVQTKIQSK 188
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 38.7 bits (86), Expect = 7e-04
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = -1
Query: 625 GTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLES--KGXXXXXXXXNGIRSFPGVLAY 452
G E+ ++ + R MN N + Y+T A+ + ES G G P + Y
Sbjct: 89 GEFESYNIEEMHRQMNVNFWGVAYITKEALNLMRESGKGGRILQISSVAGYYPSPCLSMY 148
Query: 451 NISKASVDQFTRCVALELAPK-GVRVNCVNPGVILTE 344
N SK +V+ ++ + EL P + + V PG + TE
Sbjct: 149 NASKFAVEGLSQTIMRELDPNWNIAITIVQPGGMQTE 185
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 38.3 bits (85), Expect = 0.001
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = -1
Query: 586 LMNTNVRSIYYLTMLAVPHLL-ESKGXXXXXXXXNGIRSFPGVLAYNISKASVDQFTRCV 410
++ TNV + +T +P ++KG G S+ G Y +K+++ QFT +
Sbjct: 113 MITTNVLGMMAMTRAVLPIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQFTSAL 172
Query: 409 ALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAFLERTKETHALGRPGKPDEVAATI 230
E +R+ V+PG++ TE S ++ ++ + P P+++A I
Sbjct: 173 RKETIDTRIRIMEVDPGLVETE------FSVVRFHGDKQKADNVYKNSEPLTPEDIAEVI 226
Query: 229 AF 224
F
Sbjct: 227 LF 228
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 34.3 bits (75), Expect = 0.015
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = -1
Query: 619 IENTSLAQYDRLMNTNVRSIYYLTMLAVPHLL-ESKGXXXXXXXXNGIRSFPGVLAYNIS 443
+E+T+ Q + NTNV + P + G G +FP Y +
Sbjct: 58 LESTTEEQIHNIFNTNVFGALEVIKAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGT 117
Query: 442 KASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAF 299
K +++ + + E+ GV+V + PG TE + G + + YA +
Sbjct: 118 KYAIEGISEALTWEMQSIGVKVKIIEPGFTATEFRVEEG-AGKHYAEY 164
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 34.3 bits (75), Expect = 0.015
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = -1
Query: 619 IENTSLAQYDRLMNTNVRSIYYLTMLAVPHLL-ESKGXXXXXXXXNGIRSFPGVLAYNIS 443
+E+T+ Q + NTNV + P + G G +FP Y +
Sbjct: 58 LESTTEEQIHNIFNTNVFGALEVIKAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGT 117
Query: 442 KASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAF 299
K +++ + + E+ GV+V + PG TE + G + + YA +
Sbjct: 118 KYAIEGISEALTWEMQSIGVKVKIIEPGFTATEFRVEEG-AGKHYAEY 164
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 28.7 bits (61), Expect = 0.76
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = -1
Query: 457 AYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLS-EEQYAAFLERTKE 281
AY SKA+++ + ++ EL G V ++PGV+ T++ +Y +E K
Sbjct: 158 AYGQSKAALNYTMKEISFELEKDGFVVVSIHPGVVNTDMFVNAMQKLASKYPEMVESIK- 216
Query: 280 THALGRPGKPDEVAATIAFLASDLASNITGASVPVDG 170
++A+ P++ A+++ + +L + G +DG
Sbjct: 217 SNAI----SPEQSASSMLKIVDNLKTEDNGMFYNLDG 249
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 348 VRITPGLTQLTRTPFGANSKATQRVNWSTDALEMLY 455
V + P LTQL+ G NSK Q + + +LE+LY
Sbjct: 188 VLLIPHLTQLSVNGCGLNSKDVQWITETFPSLEVLY 223
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = -1
Query: 466 GVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTEL 341
G AY SKA+++ + +++ELA + ++PGV+ T++
Sbjct: 154 GFSAYGQSKAAINFTMKELSVELADEHFTFISIHPGVVKTDM 195
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 354 ITPGLTQLTRTPFGANSKATQRVNWSTDALEML 452
++ LT TPF A + VNWST +M+
Sbjct: 585 VSSSLTGSVVTPFSAKTSTFNEVNWSTSPDQMV 617
>SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 292 RTKETHALGRPGKPDEVAATIAFLASDLASNITGASV 182
R K LG P + D AAT FLA +L ++ G ++
Sbjct: 55 RMKRLEELGLPNRKDAAAATYQFLA-NLQASFLGTTI 90
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -1
Query: 457 AYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTE 344
AY SKA+++ + ++ EL +G V ++PG + T+
Sbjct: 157 AYGQSKAALNYTMKEISFELQDEGFIVISIHPGAVRTD 194
>SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 241 AATIAFLASDLASNIT--GASVPVDGGRHAMCP 149
A+ A+LAS LAS +T G VPV G M P
Sbjct: 184 ASFYAYLASQLASKVTAVGNKVPVVTGFFGMVP 216
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -1
Query: 430 DQFTRCVA--LELAPKGVRVNCVNP 362
D FT V+ L+L P+G +C+NP
Sbjct: 336 DMFTYAVSGSLKLTPQGTGFDCINP 360
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 354 ITPGLTQLTRTPFGANSKATQRVNWSTDA 440
ITPG+T T P G S + N ST A
Sbjct: 198 ITPGVTSTTGAPSGKASLSRAASNSSTSA 226
>SPBC691.05c ||SPBP22H7.01c|membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 668
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 577 TNVRSIYYLTMLAVPHLL 524
TN + I Y+T+LAVP L+
Sbjct: 434 TNAQVINYITILAVPQLI 451
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = -1
Query: 454 YNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTE 344
Y SKA+++ + ++ EL +G V ++PG++ T+
Sbjct: 158 YGQSKAALNFTMKEISFELQDEGFIVISIHPGMVRTD 194
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,739,294
Number of Sequences: 5004
Number of extensions: 56452
Number of successful extensions: 141
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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