Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13f18
(354 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB... 32 0.18
AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA... 32 0.18
AE013599-1514|ABI31087.1| 180|Drosophila melanogaster CG33632-P... 29 1.3
BT015232-1|AAT94461.1| 965|Drosophila melanogaster RE10852p pro... 27 6.9
AF132168-1|AAD34756.1| 879|Drosophila melanogaster unknown prot... 27 6.9
AE014297-385|ABI31142.1| 1689|Drosophila melanogaster CG34113-PO... 27 6.9
AE014297-384|ABI31143.1| 1056|Drosophila melanogaster CG34113-PP... 27 6.9
AE013599-3001|AAF57478.1| 879|Drosophila melanogaster CG8920-PA... 27 6.9
AE013599-3000|AAF57476.3| 1222|Drosophila melanogaster CG8920-PC... 27 6.9
AE013599-2999|AAF57477.3| 1222|Drosophila melanogaster CG8920-PB... 27 6.9
BT022874-1|AAY55290.1| 613|Drosophila melanogaster IP12844p pro... 27 9.1
BT022851-1|AAY55267.1| 613|Drosophila melanogaster IP13044p pro... 27 9.1
>AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB,
isoform B protein.
Length = 2347
Score = 32.3 bits (70), Expect = 0.18
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +1
Query: 37 KHYIQR*YSQTMSTIYINLYIFFSYTYTEFGRLDSIERSL 156
+HY+ + Y + +IY N ++ F+ + T+FG L+ I+ L
Sbjct: 760 QHYVYKTYWTFVLSIYANFFVKFNSSSTDFGHLELIKGDL 799
>AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA,
isoform A protein.
Length = 2451
Score = 32.3 bits (70), Expect = 0.18
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +1
Query: 37 KHYIQR*YSQTMSTIYINLYIFFSYTYTEFGRLDSIERSL 156
+HY+ + Y + +IY N ++ F+ + T+FG L+ I+ L
Sbjct: 760 QHYVYKTYWTFVLSIYANFFVKFNSSSTDFGHLELIKGDL 799
>AE013599-1514|ABI31087.1| 180|Drosophila melanogaster CG33632-PA
protein.
Length = 180
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 179 FLTNCSRDRLRSIESNRPNSVYVYEKNIYKLMYIVDIVCEY 57
FL N + D R ++S PN + +Y N++K ++ C Y
Sbjct: 88 FLYNMTLDGCRFLKSRNPNPIALYFYNLFKDYSNINHTCPY 128
>BT015232-1|AAT94461.1| 965|Drosophila melanogaster RE10852p
protein.
Length = 965
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 9 PIYXFYNKIKTLHTALIFANNVYN 80
P Y +NK++ LH ++ A +VY+
Sbjct: 401 PAYNIFNKLRNLHCSVQIAGDVYS 424
>AF132168-1|AAD34756.1| 879|Drosophila melanogaster unknown
protein.
Length = 879
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 9 PIYXFYNKIKTLHTALIFANNVYN 80
P Y +NK++ LH ++ A +VY+
Sbjct: 315 PAYNIFNKLRNLHCSVQIAGDVYS 338
>AE014297-385|ABI31142.1| 1689|Drosophila melanogaster CG34113-PO,
isoform O protein.
Length = 1689
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 44 TYSVNIRKQCLQYTLIYIYFFRIR-TQSSVDW 136
+Y+ NIR+ CL ++++ I T +DW
Sbjct: 16 SYNANIRRSCLALFALFLFAAHISLTSGQIDW 47
>AE014297-384|ABI31143.1| 1056|Drosophila melanogaster CG34113-PP,
isoform P protein.
Length = 1056
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 44 TYSVNIRKQCLQYTLIYIYFFRIR-TQSSVDW 136
+Y+ NIR+ CL ++++ I T +DW
Sbjct: 16 SYNANIRRSCLALFALFLFAAHISLTSGQIDW 47
>AE013599-3001|AAF57478.1| 879|Drosophila melanogaster CG8920-PA,
isoform A protein.
Length = 879
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 9 PIYXFYNKIKTLHTALIFANNVYN 80
P Y +NK++ LH ++ A +VY+
Sbjct: 315 PAYNIFNKLRNLHCSVQIAGDVYS 338
>AE013599-3000|AAF57476.3| 1222|Drosophila melanogaster CG8920-PC,
isoform C protein.
Length = 1222
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 9 PIYXFYNKIKTLHTALIFANNVYN 80
P Y +NK++ LH ++ A +VY+
Sbjct: 401 PAYNIFNKLRNLHCSVQIAGDVYS 424
>AE013599-2999|AAF57477.3| 1222|Drosophila melanogaster CG8920-PB,
isoform B protein.
Length = 1222
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 9 PIYXFYNKIKTLHTALIFANNVYN 80
P Y +NK++ LH ++ A +VY+
Sbjct: 401 PAYNIFNKLRNLHCSVQIAGDVYS 424
>BT022874-1|AAY55290.1| 613|Drosophila melanogaster IP12844p
protein.
Length = 613
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 274 YQHVTPPLISKVTHSNYIY*NKTT 345
+QH TPP + T + +I+ KTT
Sbjct: 284 FQHTTPPPTTTTTTTEFIFPGKTT 307
>BT022851-1|AAY55267.1| 613|Drosophila melanogaster IP13044p
protein.
Length = 613
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 274 YQHVTPPLISKVTHSNYIY*NKTT 345
+QH TPP + T + +I+ KTT
Sbjct: 284 FQHTTPPPTTTTTTTEFIFPGKTT 307
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,534,652
Number of Sequences: 53049
Number of extensions: 236317
Number of successful extensions: 509
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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