Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13f14
(714 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY121685-1|AAM52012.1| 539|Drosophila melanogaster RE36877p pro... 150 2e-36
AE013599-2222|AAF58040.2| 539|Drosophila melanogaster CG15706-P... 150 2e-36
BT003244-1|AAO25001.1| 588|Drosophila melanogaster LD37218p pro... 105 5e-23
AE014296-2002|AAF50028.1| 575|Drosophila melanogaster CG7334-PA... 105 5e-23
AE014296-2001|AAS65032.1| 596|Drosophila melanogaster CG7334-PB... 105 5e-23
AY060927-1|AAL28475.1| 189|Drosophila melanogaster GM06782p pro... 92 8e-19
AE013599-1939|AAF58217.1| 762|Drosophila melanogaster CG12858-P... 61 1e-09
AY094862-1|AAM11215.1| 762|Drosophila melanogaster RE22711p pro... 60 3e-09
AY128419-1|AAM75012.1| 741|Drosophila melanogaster GH14073p pro... 38 0.014
AF239609-1|AAF63501.1| 741|Drosophila melanogaster SP1173 protein. 38 0.014
AE014296-1144|AAN12079.1| 741|Drosophila melanogaster CG10121-P... 38 0.014
AE014296-1143|AAN12078.1| 741|Drosophila melanogaster CG10121-P... 38 0.014
AE014296-1142|AAF50650.1| 741|Drosophila melanogaster CG10121-P... 38 0.014
AE014296-1141|AAN12077.1| 741|Drosophila melanogaster CG10121-P... 38 0.014
AE014298-1677|AAF48086.1| 529|Drosophila melanogaster CG15221-P... 33 0.39
BT021962-1|AAX94783.1| 901|Drosophila melanogaster LD03464p pro... 31 1.6
BT016060-1|AAV36945.1| 535|Drosophila melanogaster LP14756p pro... 31 1.6
AE014298-946|AAF46196.1| 535|Drosophila melanogaster CG14439-PA... 31 1.6
AE013599-1446|AAM68665.1| 837|Drosophila melanogaster CG8841-PC... 31 1.6
AE013599-1445|AAM68664.1| 837|Drosophila melanogaster CG8841-PB... 31 1.6
AE013599-1444|AAF58533.1| 837|Drosophila melanogaster CG8841-PA... 31 1.6
AE013599-1753|AAF58348.1| 883|Drosophila melanogaster CG6197-PA... 30 2.7
BT022325-1|AAY54741.1| 131|Drosophila melanogaster IP04544p pro... 30 3.6
AE014297-2857|AAF55804.1| 136|Drosophila melanogaster CG15690-P... 30 3.6
>AY121685-1|AAM52012.1| 539|Drosophila melanogaster RE36877p
protein.
Length = 539
Score = 150 bits (364), Expect = 2e-36
Identities = 76/145 (52%), Positives = 98/145 (67%)
Frame = -1
Query: 711 LEELAEETGSIXTIKLIEGVVVAAQSFVGELLFFFCSGKIIKRWGYGTTLTFSLFCYGIR 532
LE++AE TG + IKLIEG+VVAA+ GE+ FFF SGKIIK+ GY ++ F Y +R
Sbjct: 345 LEQVAEATGYMHQIKLIEGLVVAAECLAGEVPFFFYSGKIIKKLGYVHCMSMCFFFYAVR 404
Query: 531 MALISFIRNPWQLVLIEGIMQGPTYALCYATIVGYAAHVAPDGYSATVQGIVAGMDDGVG 352
++LI++I NPW LV +E QG TYALCY IV YA+ VAP G SATVQG++AGMDDG+G
Sbjct: 405 LSLIAWIPNPWYLVGVELFFQGITYALCYTCIVAYASAVAPPGTSATVQGLMAGMDDGLG 464
Query: 351 FAXXXXXXXXXXXXXXGRYSFRVFS 277
F+ GR SF+ F+
Sbjct: 465 FSIGSLIGGLMFKSLGGRESFKYFA 489
>AE013599-2222|AAF58040.2| 539|Drosophila melanogaster CG15706-PA
protein.
Length = 539
Score = 150 bits (364), Expect = 2e-36
Identities = 76/145 (52%), Positives = 98/145 (67%)
Frame = -1
Query: 711 LEELAEETGSIXTIKLIEGVVVAAQSFVGELLFFFCSGKIIKRWGYGTTLTFSLFCYGIR 532
LE++AE TG + IKLIEG+VVAA+ GE+ FFF SGKIIK+ GY ++ F Y +R
Sbjct: 345 LEQVAEATGYMHQIKLIEGLVVAAECLAGEVPFFFYSGKIIKKLGYVHCMSMCFFFYAVR 404
Query: 531 MALISFIRNPWQLVLIEGIMQGPTYALCYATIVGYAAHVAPDGYSATVQGIVAGMDDGVG 352
++LI++I NPW LV +E QG TYALCY IV YA+ VAP G SATVQG++AGMDDG+G
Sbjct: 405 LSLIAWIPNPWYLVGVELFFQGITYALCYTCIVAYASAVAPPGTSATVQGLMAGMDDGLG 464
Query: 351 FAXXXXXXXXXXXXXXGRYSFRVFS 277
F+ GR SF+ F+
Sbjct: 465 FSIGSLIGGLMFKSLGGRESFKYFA 489
>BT003244-1|AAO25001.1| 588|Drosophila melanogaster LD37218p
protein.
Length = 588
Score = 105 bits (253), Expect = 5e-23
Identities = 57/146 (39%), Positives = 85/146 (58%), Gaps = 1/146 (0%)
Frame = -1
Query: 714 FLEELAEE-TGSIXTIKLIEGVVVAAQSFVGELLFFFCSGKIIKRWGYGTTLTFSLFCYG 538
+LEEL + G +IK +EG+V+ Q F GEL FFF SG I+K+ G+ ++ LF +G
Sbjct: 393 YLEELDKAFEGCDSSIKTLEGLVMGIQCFGGELPFFFLSGWILKKIGHVNAMSVVLFGFG 452
Query: 537 IRMALISFIRNPWQLVLIEGIMQGPTYALCYATIVGYAAHVAPDGYSATVQGIVAGMDDG 358
+R L S ++NPW ++ IE +M G T+ L YAT+ YA+ VAP G AT+Q +V + +G
Sbjct: 453 VRFILYSMLQNPWYILPIE-LMNGVTFGLFYATMASYASIVAPPGTDATMQSLVGAIFEG 511
Query: 357 VGFAXXXXXXXXXXXXXXGRYSFRVF 280
VG + R +F +F
Sbjct: 512 VGVSMGNLIAGQLFESVTARTTFEIF 537
>AE014296-2002|AAF50028.1| 575|Drosophila melanogaster CG7334-PA,
isoform A protein.
Length = 575
Score = 105 bits (253), Expect = 5e-23
Identities = 57/146 (39%), Positives = 85/146 (58%), Gaps = 1/146 (0%)
Frame = -1
Query: 714 FLEELAEE-TGSIXTIKLIEGVVVAAQSFVGELLFFFCSGKIIKRWGYGTTLTFSLFCYG 538
+LEEL + G +IK +EG+V+ Q F GEL FFF SG I+K+ G+ ++ LF +G
Sbjct: 364 YLEELDKAFEGCDSSIKTLEGLVMGIQCFGGELPFFFLSGWILKKIGHVNAMSVVLFGFG 423
Query: 537 IRMALISFIRNPWQLVLIEGIMQGPTYALCYATIVGYAAHVAPDGYSATVQGIVAGMDDG 358
+R L S ++NPW ++ IE +M G T+ L YAT+ YA+ VAP G AT+Q +V + +G
Sbjct: 424 VRFILYSMLQNPWYILPIE-LMNGVTFGLFYATMASYASIVAPPGTDATMQSLVGAIFEG 482
Query: 357 VGFAXXXXXXXXXXXXXXGRYSFRVF 280
VG + R +F +F
Sbjct: 483 VGVSMGSLIAGQLFESVTARTTFEIF 508
>AE014296-2001|AAS65032.1| 596|Drosophila melanogaster CG7334-PB,
isoform B protein.
Length = 596
Score = 105 bits (253), Expect = 5e-23
Identities = 57/146 (39%), Positives = 85/146 (58%), Gaps = 1/146 (0%)
Frame = -1
Query: 714 FLEELAEE-TGSIXTIKLIEGVVVAAQSFVGELLFFFCSGKIIKRWGYGTTLTFSLFCYG 538
+LEEL + G +IK +EG+V+ Q F GEL FFF SG I+K+ G+ ++ LF +G
Sbjct: 385 YLEELDKAFEGCDSSIKTLEGLVMGIQCFGGELPFFFLSGWILKKIGHVNAMSVVLFGFG 444
Query: 537 IRMALISFIRNPWQLVLIEGIMQGPTYALCYATIVGYAAHVAPDGYSATVQGIVAGMDDG 358
+R L S ++NPW ++ IE +M G T+ L YAT+ YA+ VAP G AT+Q +V + +G
Sbjct: 445 VRFILYSMLQNPWYILPIE-LMNGVTFGLFYATMASYASIVAPPGTDATMQSLVGAIFEG 503
Query: 357 VGFAXXXXXXXXXXXXXXGRYSFRVF 280
VG + R +F +F
Sbjct: 504 VGVSMGSLIAGQLFESVTARTTFEIF 529
>AY060927-1|AAL28475.1| 189|Drosophila melanogaster GM06782p
protein.
Length = 189
Score = 91.9 bits (218), Expect = 8e-19
Identities = 47/120 (39%), Positives = 69/120 (57%)
Frame = -1
Query: 639 QSFVGELLFFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPT 460
Q F GEL FFF SG I+K+ G+ ++ LF +G+R L S ++NPW ++ IE +M G T
Sbjct: 4 QCFGGELPFFFLSGWILKKIGHVNAMSVVLFGFGVRFILYSMLQNPWYILPIE-LMNGVT 62
Query: 459 YALCYATIVGYAAHVAPDGYSATVQGIVAGMDDGVGFAXXXXXXXXXXXXXXGRYSFRVF 280
+ L YAT+ YA+ VAP G AT+Q +V + +GVG + R +F +F
Sbjct: 63 FGLFYATMASYASIVAPPGTDATMQSLVGAIFEGVGVSMGSLIAGQLFETVTARTTFEIF 122
>AE013599-1939|AAF58217.1| 762|Drosophila melanogaster CG12858-PA
protein.
Length = 762
Score = 61.3 bits (142), Expect = 1e-09
Identities = 32/100 (32%), Positives = 53/100 (53%)
Frame = -1
Query: 651 VVAAQSFVGELLFFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIM 472
V + + V E+ +F S ++I + G+ L L +R IS++ NPW ++ E +M
Sbjct: 545 VASVINHVSEIFAYFFSFRLITQIGHVKVLCLGLIGNVLRFLYISYLTNPWMVLPFE-LM 603
Query: 471 QGPTYALCYATIVGYAAHVAPDGYSATVQGIVAGMDDGVG 352
QG T+A +A Y AH P A+ QG++ G+ G+G
Sbjct: 604 QGITHAAVWAASCSYIAHNTPKHLRASAQGVLQGIHHGLG 643
>AY094862-1|AAM11215.1| 762|Drosophila melanogaster RE22711p
protein.
Length = 762
Score = 60.1 bits (139), Expect = 3e-09
Identities = 31/100 (31%), Positives = 53/100 (53%)
Frame = -1
Query: 651 VVAAQSFVGELLFFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIM 472
V + + V ++ +F S ++I + G+ L L +R IS++ NPW ++ E +M
Sbjct: 545 VASVINHVSDIFAYFFSFRLITQIGHVKVLCLGLIGNVLRFLYISYLTNPWMVLPFE-LM 603
Query: 471 QGPTYALCYATIVGYAAHVAPDGYSATVQGIVAGMDDGVG 352
QG T+A +A Y AH P A+ QG++ G+ G+G
Sbjct: 604 QGITHAAVWAASCSYIAHNTPKHLRASAQGVLQGIHHGLG 643
>AY128419-1|AAM75012.1| 741|Drosophila melanogaster GH14073p
protein.
Length = 741
Score = 37.9 bits (84), Expect = 0.014
Identities = 26/90 (28%), Positives = 39/90 (43%)
Frame = -1
Query: 621 LLFFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYA 442
L+ FF K I+ G+ L + IR +S + W V++E I + L +
Sbjct: 534 LVLFFNVDKFIEYCGHSNIFIGGLAIFVIRFTALSDAQTKWLTVIMETI-EPAVIGLIWI 592
Query: 441 TIVGYAAHVAPDGYSATVQGIVAGMDDGVG 352
TI+ Y H P +AT Q I G+G
Sbjct: 593 TIILYMRHAMPRKLTATGQAIAVLAFFGLG 622
>AF239609-1|AAF63501.1| 741|Drosophila melanogaster SP1173 protein.
Length = 741
Score = 37.9 bits (84), Expect = 0.014
Identities = 26/90 (28%), Positives = 39/90 (43%)
Frame = -1
Query: 621 LLFFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYA 442
L+ FF K I+ G+ L + IR +S + W V++E I + L +
Sbjct: 534 LVLFFNVDKFIEYCGHSNIFIGGLAIFVIRFTALSDAQTKWLTVIMETI-EPAVIGLIWI 592
Query: 441 TIVGYAAHVAPDGYSATVQGIVAGMDDGVG 352
TI+ Y H P +AT Q I G+G
Sbjct: 593 TIILYMRHAMPRKLTATGQAIAVLAFFGLG 622
>AE014296-1144|AAN12079.1| 741|Drosophila melanogaster CG10121-PD,
isoform D protein.
Length = 741
Score = 37.9 bits (84), Expect = 0.014
Identities = 26/90 (28%), Positives = 39/90 (43%)
Frame = -1
Query: 621 LLFFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYA 442
L+ FF K I+ G+ L + IR +S + W V++E I + L +
Sbjct: 534 LVLFFNVDKFIEYCGHSNIFIGGLAIFVIRFTALSDAQTKWLTVIMETI-EPAVIGLIWI 592
Query: 441 TIVGYAAHVAPDGYSATVQGIVAGMDDGVG 352
TI+ Y H P +AT Q I G+G
Sbjct: 593 TIILYMRHAMPRKLTATGQAIAVLAFFGLG 622
>AE014296-1143|AAN12078.1| 741|Drosophila melanogaster CG10121-PC,
isoform C protein.
Length = 741
Score = 37.9 bits (84), Expect = 0.014
Identities = 26/90 (28%), Positives = 39/90 (43%)
Frame = -1
Query: 621 LLFFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYA 442
L+ FF K I+ G+ L + IR +S + W V++E I + L +
Sbjct: 534 LVLFFNVDKFIEYCGHSNIFIGGLAIFVIRFTALSDAQTKWLTVIMETI-EPAVIGLIWI 592
Query: 441 TIVGYAAHVAPDGYSATVQGIVAGMDDGVG 352
TI+ Y H P +AT Q I G+G
Sbjct: 593 TIILYMRHAMPRKLTATGQAIAVLAFFGLG 622
>AE014296-1142|AAF50650.1| 741|Drosophila melanogaster CG10121-PB,
isoform B protein.
Length = 741
Score = 37.9 bits (84), Expect = 0.014
Identities = 26/90 (28%), Positives = 39/90 (43%)
Frame = -1
Query: 621 LLFFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYA 442
L+ FF K I+ G+ L + IR +S + W V++E I + L +
Sbjct: 534 LVLFFNVDKFIEYCGHSNIFIGGLAIFVIRFTALSDAQTKWLTVIMETI-EPAVIGLIWI 592
Query: 441 TIVGYAAHVAPDGYSATVQGIVAGMDDGVG 352
TI+ Y H P +AT Q I G+G
Sbjct: 593 TIILYMRHAMPRKLTATGQAIAVLAFFGLG 622
>AE014296-1141|AAN12077.1| 741|Drosophila melanogaster CG10121-PA,
isoform A protein.
Length = 741
Score = 37.9 bits (84), Expect = 0.014
Identities = 26/90 (28%), Positives = 39/90 (43%)
Frame = -1
Query: 621 LLFFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYA 442
L+ FF K I+ G+ L + IR +S + W V++E I + L +
Sbjct: 534 LVLFFNVDKFIEYCGHSNIFIGGLAIFVIRFTALSDAQTKWLTVIMETI-EPAVIGLIWI 592
Query: 441 TIVGYAAHVAPDGYSATVQGIVAGMDDGVG 352
TI+ Y H P +AT Q I G+G
Sbjct: 593 TIILYMRHAMPRKLTATGQAIAVLAFFGLG 622
>AE014298-1677|AAF48086.1| 529|Drosophila melanogaster CG15221-PA
protein.
Length = 529
Score = 33.1 bits (72), Expect = 0.39
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = -1
Query: 651 VVAAQSFVGELLFFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVL 487
++A+ F+G +L G + WG TTL ++L + + +F N W L++
Sbjct: 72 ILASAGFLGVVLSSHAMGFLADTWGRATTLRYALCISSVCSIVSAFSVNIWMLIV 126
>BT021962-1|AAX94783.1| 901|Drosophila melanogaster LD03464p
protein.
Length = 901
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 388 DSRRVTVRGHMSRVPDYSSVAKGICRALHNPLYQHQLP 501
D+ + + R D+ V KGI R L+NPL Q+ LP
Sbjct: 370 DNLFINYLSRVHRDEDFHFVLKGITRLLNNPLVQNYLP 407
>BT016060-1|AAV36945.1| 535|Drosophila melanogaster LP14756p
protein.
Length = 535
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -1
Query: 564 LTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIVGYAAHVAPDGYSATVQ 385
LT +GI M L ++ WQLV++ IM C G + + P+ A V
Sbjct: 131 LTVCTVIFGIAMILQGTVKEYWQLVILRMIMAAGESG-CNPLATGIMSDIFPEDKRALVM 189
Query: 384 GIVA-GMDDGVGFA 346
I G+ G G A
Sbjct: 190 AIFNWGIYGGYGIA 203
>AE014298-946|AAF46196.1| 535|Drosophila melanogaster CG14439-PA
protein.
Length = 535
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -1
Query: 564 LTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIVGYAAHVAPDGYSATVQ 385
LT +GI M L ++ WQLV++ IM C G + + P+ A V
Sbjct: 131 LTVCTVIFGIAMILQGTVKEYWQLVILRMIMAAGESG-CNPLATGIMSDIFPEDKRALVM 189
Query: 384 GIVA-GMDDGVGFA 346
I G+ G G A
Sbjct: 190 AIFNWGIYGGYGIA 203
>AE013599-1446|AAM68665.1| 837|Drosophila melanogaster CG8841-PC,
isoform C protein.
Length = 837
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 388 DSRRVTVRGHMSRVPDYSSVAKGICRALHNPLYQHQLP 501
D+ + + R D+ V KGI R L+NPL Q+ LP
Sbjct: 306 DNLFINYLSRVHRDEDFHFVLKGITRLLNNPLVQNYLP 343
>AE013599-1445|AAM68664.1| 837|Drosophila melanogaster CG8841-PB,
isoform B protein.
Length = 837
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 388 DSRRVTVRGHMSRVPDYSSVAKGICRALHNPLYQHQLP 501
D+ + + R D+ V KGI R L+NPL Q+ LP
Sbjct: 306 DNLFINYLSRVHRDEDFHFVLKGITRLLNNPLVQNYLP 343
>AE013599-1444|AAF58533.1| 837|Drosophila melanogaster CG8841-PA,
isoform A protein.
Length = 837
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 388 DSRRVTVRGHMSRVPDYSSVAKGICRALHNPLYQHQLP 501
D+ + + R D+ V KGI R L+NPL Q+ LP
Sbjct: 306 DNLFINYLSRVHRDEDFHFVLKGITRLLNNPLVQNYLP 343
>AE013599-1753|AAF58348.1| 883|Drosophila melanogaster CG6197-PA
protein.
Length = 883
Score = 30.3 bits (65), Expect = 2.7
Identities = 27/96 (28%), Positives = 40/96 (41%)
Frame = +1
Query: 220 PIEFQEHRGVEDGRHHRQYAEHAEGISTAHRTVKLSA*QRAQGETHAVVHAGHYALDSRR 399
P E + R +H +Y +H + V + +RA E H L +RR
Sbjct: 21 PYEEEILRNAYSVKHWLRYIDHKA--KAPNNGVNMVY-ERALKELPGSYKIWHNYLRTRR 77
Query: 400 VTVRGHMSRVPDYSSVAKGICRALHNPLYQHQLPRI 507
VRG + P Y V RAL ++ H++PRI
Sbjct: 78 KQVRGKIPTDPMYEEVNSAFERAL---VFMHKMPRI 110
>BT022325-1|AAY54741.1| 131|Drosophila melanogaster IP04544p
protein.
Length = 131
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +1
Query: 232 QEHRGVEDGRHHRQYAEHAEGISTAHRTVKLSA*QRAQGETHAVVHAGHYALDSRRVTVR 411
Q+H ++ HHRQ++ H + + H L+ R Q +H+ VH G D R T
Sbjct: 34 QQH--LQQQYHHRQHSLHQQHLQRQHSHTSLTKIHR-QSSSHS-VHGGGGRADHHRTTT- 88
Query: 412 GHMSRVPDY 438
G R+ Y
Sbjct: 89 GATGRLFSY 97
>AE014297-2857|AAF55804.1| 136|Drosophila melanogaster CG15690-PA
protein.
Length = 136
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +1
Query: 232 QEHRGVEDGRHHRQYAEHAEGISTAHRTVKLSA*QRAQGETHAVVHAGHYALDSRRVTVR 411
Q+H ++ HHRQ++ H + + H L+ R Q +H+ VH G D R T
Sbjct: 39 QQH--LQQQYHHRQHSLHQQHLQRQHSHTSLTKIHR-QSSSHS-VHGGGGRADHHRTTT- 93
Query: 412 GHMSRVPDY 438
G R+ Y
Sbjct: 94 GATGRLFSY 102
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,880,692
Number of Sequences: 53049
Number of extensions: 571284
Number of successful extensions: 1487
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -