Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13f04
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 244 4e-65
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 242 2e-64
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 242 2e-64
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 241 3e-64
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 240 6e-64
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 235 2e-62
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 234 6e-62
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 232 2e-61
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 226 1e-59
12_02_1282 + 27528159-27529148,27529549-27529614 167 7e-42
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 99 3e-21
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 95 4e-20
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 93 3e-19
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 79 4e-15
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 76 2e-14
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 71 9e-13
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 70 2e-12
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 67 1e-11
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 33 0.28
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 31 0.66
08_02_0238 + 14665813-14668798,14669088-14669125 29 3.5
07_03_0752 - 21241883-21242233,21242336-21242486,21242586-212428... 29 3.5
01_06_1741 + 39581656-39581680,39582627-39582697,39582779-395828... 29 3.5
07_03_0008 + 12303536-12303893,12303910-12304176,12304635-123049... 29 4.6
09_04_0503 - 18170645-18170858,18171029-18171222,18171419-181716... 28 6.1
05_04_0437 + 21234261-21234592,21234929-21234997,21235506-212356... 28 8.1
03_05_1049 - 29956379-29956400,29957103-29957188,29957269-299574... 28 8.1
02_05_0615 - 30364956-30365729,30365813-30366286 28 8.1
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 244 bits (598), Expect = 4e-65
Identities = 110/123 (89%), Positives = 117/123 (95%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 419
+RFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADR
Sbjct: 255 ERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 314
Query: 418 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 239
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374
Query: 238 KCF 230
KCF
Sbjct: 375 KCF 377
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -3
Query: 663 SSSXLEKSYELPDGQVITIGKRK 595
+SS +EKSYELPDGQVITIG +
Sbjct: 234 TSSSVEKSYELPDGQVITIGAER 256
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 242 bits (593), Expect = 2e-64
Identities = 109/123 (88%), Positives = 116/123 (94%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 419
+RFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADR
Sbjct: 255 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 314
Query: 418 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 239
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHR 374
Query: 238 KCF 230
KCF
Sbjct: 375 KCF 377
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -3
Query: 663 SSSXLEKSYELPDGQVITIGKRK 595
+SS +EKSYELPDGQVITIG +
Sbjct: 234 NSSSVEKSYELPDGQVITIGAER 256
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 242 bits (592), Expect = 2e-64
Identities = 108/124 (87%), Positives = 117/124 (94%)
Frame = -2
Query: 601 TKRFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 422
++RFRCPE LFQPS +GME+ GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIAD
Sbjct: 254 SERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIAD 313
Query: 421 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 242
RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVH
Sbjct: 314 RMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVH 373
Query: 241 RKCF 230
RKCF
Sbjct: 374 RKCF 377
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -3
Query: 663 SSSXLEKSYELPDGQVITIGKRK 595
+SS +EKSYELPDGQVITIG +
Sbjct: 234 NSSSIEKSYELPDGQVITIGSER 256
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 241 bits (591), Expect = 3e-64
Identities = 110/123 (89%), Positives = 116/123 (94%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 419
+RFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADR
Sbjct: 252 ERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 311
Query: 418 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 239
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHR
Sbjct: 312 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHR 371
Query: 238 KCF 230
KCF
Sbjct: 372 KCF 374
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -3
Query: 663 SSSXLEKSYELPDGQVITIGKRK 595
SSS +EKSYELPDGQVITIG +
Sbjct: 231 SSSSVEKSYELPDGQVITIGAER 253
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 240 bits (588), Expect = 6e-64
Identities = 108/123 (87%), Positives = 116/123 (94%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 419
+RFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADR
Sbjct: 258 ERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADR 317
Query: 418 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 239
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHR
Sbjct: 318 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHR 377
Query: 238 KCF 230
KCF
Sbjct: 378 KCF 380
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -3
Query: 663 SSSXLEKSYELPDGQVITIGKRK 595
+SS +EKSYELPDGQVITIG +
Sbjct: 237 NSSSVEKSYELPDGQVITIGAER 259
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 235 bits (576), Expect = 2e-62
Identities = 105/123 (85%), Positives = 116/123 (94%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 419
+RFRCPE +FQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADR
Sbjct: 255 ERFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 314
Query: 418 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 239
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHR 374
Query: 238 KCF 230
KCF
Sbjct: 375 KCF 377
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -3
Query: 663 SSSXLEKSYELPDGQVITIGKRK 595
SSS +EKSYELPDGQVITIG +
Sbjct: 234 SSSSVEKSYELPDGQVITIGAER 256
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 234 bits (572), Expect = 6e-62
Identities = 105/123 (85%), Positives = 112/123 (91%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 419
+RFRCPE LFQPSF+GMEA GIHE TYNSIMKCDVDIRKDLY N VLSGG+TM+PGI DR
Sbjct: 254 ERFRCPEVLFQPSFIGMEAPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIGDR 313
Query: 418 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 239
M KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH
Sbjct: 314 MSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHM 373
Query: 238 KCF 230
KCF
Sbjct: 374 KCF 376
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -3
Query: 663 SSSXLEKSYELPDGQVITIGKRK 595
SSS +EKSYELPDGQVITIG +
Sbjct: 233 SSSSIEKSYELPDGQVITIGAER 255
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 232 bits (567), Expect = 2e-61
Identities = 104/124 (83%), Positives = 114/124 (91%)
Frame = -2
Query: 601 TKRFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 422
++RFRCPE LFQPS +GME+ GIHE TYNSIMKCDVDIRKDLY N VLSGG+TM+PGIAD
Sbjct: 253 SERFRCPEVLFQPSLVGMESPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIAD 312
Query: 421 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 242
RM KEIT+LAPS+MK+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH
Sbjct: 313 RMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVH 372
Query: 241 RKCF 230
KCF
Sbjct: 373 MKCF 376
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -3
Query: 663 SSSXLEKSYELPDGQVITIGKRK 595
SSS +EKSYE+PDGQVITIG +
Sbjct: 233 SSSSVEKSYEMPDGQVITIGSER 255
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 226 bits (553), Expect = 1e-59
Identities = 109/137 (79%), Positives = 117/137 (85%), Gaps = 14/137 (10%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 419
+RFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADR
Sbjct: 255 ERFRCPEVLFQPSFIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 314
Query: 418 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ--------------QMWIS 281
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQ QMWIS
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVARMQMWIS 374
Query: 280 KQEYDESGPSIVHRKCF 230
K EYDESGP+IVHRKCF
Sbjct: 375 KGEYDESGPAIVHRKCF 391
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -3
Query: 663 SSSXLEKSYELPDGQVITIGKRK 595
SSS +EKSYELPDGQVITIG +
Sbjct: 234 SSSSVEKSYELPDGQVITIGAER 256
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 167 bits (406), Expect = 7e-42
Identities = 86/123 (69%), Positives = 91/123 (73%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 419
+RFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADR
Sbjct: 255 ERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 314
Query: 418 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 239
M KEITALAPS+MKIK MWI+K EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIK--------------------------MWIAKAEYDESGPSIVHR 348
Query: 238 KCF 230
KCF
Sbjct: 349 KCF 351
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -3
Query: 666 ASSSXLEKSYELPDGQVITIGKRK 595
A+ S +EKSYELPDGQVITIG +
Sbjct: 233 ATGSSVEKSYELPDGQVITIGAER 256
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 99.1 bits (236), Expect = 3e-21
Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 6/129 (4%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 419
+R+ EALFQP LG+E GI S+ + + L NT+L GGT G DR
Sbjct: 271 ERYIVGEALFQPHILGLEDYGIVHQLVTSVSNVTPEYHRQLLENTMLCGGTASMTGFEDR 330
Query: 418 MQKEITALAPSTMKIKIIAPPE------RKYSVWIGGSILASLSTFQQMWISKQEYDESG 257
Q+E L+ S + ++ PPE +YS W+GG+ILA + Q ++K +YDE+G
Sbjct: 331 FQREAN-LSASAICPSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDYDETG 389
Query: 256 PSIVHRKCF 230
PSIVH+KCF
Sbjct: 390 PSIVHKKCF 398
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 660 SSXLEKSYELPDGQVITIGKRKDSVAQRL 574
SS + + LPDGQVITI K + V + L
Sbjct: 251 SSCRPERHTLPDGQVITIEKERYIVGEAL 279
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 95.5 bits (227), Expect = 4e-20
Identities = 45/123 (36%), Positives = 68/123 (55%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 419
+RF PE LF P LGM G+ E +I C ++ L+ +L+GG+T++P +R
Sbjct: 306 ERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTER 365
Query: 418 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 239
++KE+ L P ++KIIA + W GGS+LA F+ M I+K EY+E G R
Sbjct: 366 LEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRR 425
Query: 238 KCF 230
+ F
Sbjct: 426 RFF 428
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 92.7 bits (220), Expect = 3e-19
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 14/122 (11%)
Frame = -2
Query: 595 RFRCPEALFQPSFL-----------GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 449
RF+ P+ LF PS M G+ +S+ +CDVDIRK+L ++ +LSGG
Sbjct: 348 RFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKELLSSILLSGG 407
Query: 448 TTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISK 278
++ + +R++KE+ + ++K++A ER++SVWIGGSILASL +FQQMW SK
Sbjct: 408 SSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSK 467
Query: 277 QE 272
+
Sbjct: 468 AD 469
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 78.6 bits (185), Expect = 4e-15
Identities = 43/129 (33%), Positives = 75/129 (58%), Gaps = 10/129 (7%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGMEACGIHETTYNSIMKC---DVDIRKDLYANTVLSGGTTMYPGI 428
+RF+ E LFQP G+ A G+H+ + C +V + Y VLSGG++ PG+
Sbjct: 354 ERFKTAEILFQPQIGGVRAMGLHKAVSLCMDHCYNSEVFGDDNWYKTVVLSGGSSCLPGL 413
Query: 427 ADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEYDE-- 263
++R++KE+ L P+ + I++I PP S W G +++++STF + W I K+++ +
Sbjct: 414 SERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKT 473
Query: 262 --SGPSIVH 242
+GPS V+
Sbjct: 474 RRNGPSFVN 482
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGMEACGIHETTYNSIMKC--DVDIRKDLYANTVLSGGTTMYPGIA 425
+RFRCPE LFQP +G++ GI E S+ + D +++ L + +++GG ++ PG+
Sbjct: 580 ERFRCPEILFQPGMIGIDQAGIDEMVSISLRRLMEDEAVKERLCQSILVTGGCSLIPGMI 639
Query: 424 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 245
R++ I P +K++ + W G + A+ S F + S +Y E G ++
Sbjct: 640 PRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHGENLF 699
Query: 244 HRK 236
HRK
Sbjct: 700 HRK 702
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 70.9 bits (166), Expect = 9e-13
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 422
+RF PE F P + + + E + + +D R+DLY N VLSGG+TM+
Sbjct: 298 ERFLGPEIFFHPEIYSADFSTPLPELIDSCVQSAPIDTRRDLYKNIVLSGGSTMFKDFHK 357
Query: 421 RMQKEITALAP--------------STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 284
R+Q +I + +++ ++A P + Y+ W GGS+ AS F +
Sbjct: 358 RLQNDIKKIVDERVAATNARHHVEVKPVEVNVVAHPIQSYAAWFGGSVAASNPEFYESCH 417
Query: 283 SKQEYDESGPSI 248
+K+EY+E G SI
Sbjct: 418 TKEEYEEHGASI 429
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 17/134 (12%)
Frame = -2
Query: 598 KRFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 422
+RF PE F P + +H I +D R+ LY N VLSGG+TM+
Sbjct: 329 ERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHR 388
Query: 421 RMQKEITALAPSTM----------------KIKIIAPPERKYSVWIGGSILASLSTFQQM 290
R+Q+++ + + + ++ +++ P ++Y+VW GGS+LAS + F +
Sbjct: 389 RLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEA 448
Query: 289 WISKQEYDESGPSI 248
+K EY+E G SI
Sbjct: 449 CHTKAEYEEYGASI 462
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 25/123 (20%)
Frame = -2
Query: 601 TKRFRCPEALFQPS--------------FLGMEACGIHETTYNSIMKCDVDIRKDLYANT 464
T+RF+ PEALF P + +E G+ + + I + D+D R LY +
Sbjct: 268 TERFQAPEALFTPDQYQHNIDKTFVEQELIDVEGDGMADMAFRCIQEMDIDNRMTLYQHI 327
Query: 463 VLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWIGGSIL 317
VLSGG+TMYPG+ R++KE+ L + ++++I PP RK+ V++GG++L
Sbjct: 328 VLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVL 387
Query: 316 ASL 308
A +
Sbjct: 388 AGI 390
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 660 SSXLEKSYELPDGQVITIGKRKDSVAQRL 574
++ L KSY LPDG+VI +G + + L
Sbjct: 249 TTILVKSYTLPDGRVIKVGTERFQAPEAL 277
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = -2
Query: 535 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 356
I E Y I++ ++ ++ T +G MYP D +K+ L K APP
Sbjct: 226 IRELIYRDILEYHPNMLREYLEGTESAG--FMYPSAVDHFKKQFAYLEEHYAKGSTAAPP 283
Query: 355 ERKYSVWIGGSILAS 311
ER+++ S+L S
Sbjct: 284 ERQHNSLPRPSVLYS 298
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -2
Query: 535 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 356
I E Y I++ + ++ T +G MYP D +K+ L K APP
Sbjct: 321 IRELIYREILEYHPKMLREFLEGTESTG--FMYPSAVDHFKKQFAYLEEHYAKGSTAAPP 378
Query: 355 ERKYS 341
ER+++
Sbjct: 379 ERQHN 383
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 326 STDPYGVLPLWRSNDLNLHCRW-GESC 403
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>07_03_0752 -
21241883-21242233,21242336-21242486,21242586-21242823,
21242917-21243127,21243214-21243344,21245046-21245931,
21246087-21246140,21246397-21246461,21246842-21246892,
21246960-21247029,21247493-21247597
Length = 770
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 195 RAAGGSDARCV*KHFLCTMEGPDS 266
RAAGG ARC+ LC E P S
Sbjct: 675 RAAGGEIARCIHVGLLCVQENPAS 698
>01_06_1741 +
39581656-39581680,39582627-39582697,39582779-39582898,
39583034-39583094,39583186-39583242,39583413-39583600,
39583747-39583818,39583953-39584180
Length = 273
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -3
Query: 348 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQPAAGCSIQAC 169
+TPY + P +N ++ +A P A KRTA + + +AG + + C
Sbjct: 214 ATPYPAKQAKKTPV--NNDMAKQSSGYVHVATPYPAKQAKKRTANNDMSEHSAGYACKPC 271
Query: 168 N 166
N
Sbjct: 272 N 272
>07_03_0008 +
12303536-12303893,12303910-12304176,12304635-12304951,
12304975-12305819,12305859-12306069
Length = 665
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +3
Query: 195 RAAGGSDARCV*KHFLCTM----EGPDSSYSCFEIHICWK 302
RA G CV + FLCT+ +G + C E H+ WK
Sbjct: 301 RALGWDKFACVDEPFLCTLLKVGDGVNFRLFCKEYHLSWK 340
>09_04_0503 -
18170645-18170858,18171029-18171222,18171419-18171629,
18172162-18172553,18172926-18173054,18173353-18173487,
18173885-18174088,18174716-18174771,18174793-18174950,
18175864-18176231
Length = 686
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -2
Query: 643 VLRTSRRSGHHHRKTKRFRCPEALFQPSFLGMEACGIHE 527
+L+T+ +SGH + C E F+ +FL M+A G+ +
Sbjct: 642 ILKTNMQSGHFGEGGRFMHCDETAFEYAFL-MKALGLDD 679
>05_04_0437 +
21234261-21234592,21234929-21234997,21235506-21235629,
21235740-21235745
Length = 176
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -3
Query: 336 GSVDRSSPPSLPSNKC----GSRNKSTTSLAPPLYTGSASKRTARRCLQQPAAGCS 181
G R PP PS+ G ++ + S A P+ S SKR RR ++ +GCS
Sbjct: 68 GEARRRIPPKAPSSDASLSDGGGSEGSDSGAAPIE--SPSKRPRRRLVEHGHSGCS 121
>03_05_1049 -
29956379-29956400,29957103-29957188,29957269-29957413,
29958518-29958813,29959242-29959253
Length = 186
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 342 PYGSVDRSSPPSLPSNKCGS 283
P+ V SSPP+LP KCG+
Sbjct: 72 PFVGVPPSSPPALPPIKCGA 91
>02_05_0615 - 30364956-30365729,30365813-30366286
Length = 415
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 300 SNKC-GSRNKSTTSLAPPLYTGSASKRTARRCLQQ 199
+N C G +T + APP Y AS RTA R L++
Sbjct: 256 NNDCHGGDPNATAATAPPEYAVRASFRTALRALRE 290
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,034,346
Number of Sequences: 37544
Number of extensions: 486542
Number of successful extensions: 1510
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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