Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13e17
(661 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052122-1|AAK93546.1| 468|Drosophila melanogaster SD07421p pro... 136 3e-32
AE014134-2755|AAF53556.3| 542|Drosophila melanogaster CG17332-P... 136 3e-32
AE014134-2754|AAF53555.2| 468|Drosophila melanogaster CG17332-P... 136 3e-32
AE014134-2756|AAN10957.1| 441|Drosophila melanogaster CG17332-P... 102 5e-22
AF159457-1|AAD47254.1| 392|Drosophila melanogaster vacuolar ATP... 43 4e-04
AF520715-1|AAM55244.1| 4723|Drosophila melanogaster MICAL long i... 30 2.4
AF520714-1|AAM55243.1| 3002|Drosophila melanogaster MICAL medium... 30 2.4
AF520713-1|AAM55242.1| 2734|Drosophila melanogaster MICAL short ... 30 2.4
AE014297-1071|AAO41537.1| 4723|Drosophila melanogaster CG33208-P... 30 2.4
AE014297-1070|AAO41536.1| 4723|Drosophila melanogaster CG33208-P... 30 2.4
AE014297-1069|AAO41535.1| 4723|Drosophila melanogaster CG33208-P... 30 2.4
AE014297-1068|AAO41534.1| 4723|Drosophila melanogaster CG33208-P... 30 2.4
AE014297-1067|AAO41533.1| 4723|Drosophila melanogaster CG33208-P... 30 2.4
AE014297-1066|AAO41532.1| 3002|Drosophila melanogaster CG33208-P... 30 2.4
AE014297-1065|AAO41531.1| 2734|Drosophila melanogaster CG33208-P... 30 2.4
>AY052122-1|AAK93546.1| 468|Drosophila melanogaster SD07421p
protein.
Length = 468
Score = 136 bits (328), Expect = 3e-32
Identities = 62/82 (75%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Frame = -2
Query: 660 AVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYL 481
+VAC+DIGEYVRHYPRGKH++EQLGGKQ VM L H+DPNVRYEALLAVQKLMVHNWEYL
Sbjct: 387 SVACFDIGEYVRHYPRGKHVLEQLGGKQIVMQHLGHEDPNVRYEALLAVQKLMVHNWEYL 446
Query: 480 GKQLEKE-QIDKQAGTVVGAKA 418
GKQLEKE + KQ + KA
Sbjct: 447 GKQLEKENENQKQGAAPIAGKA 468
>AE014134-2755|AAF53556.3| 542|Drosophila melanogaster CG17332-PB,
isoform B protein.
Length = 542
Score = 136 bits (328), Expect = 3e-32
Identities = 62/82 (75%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Frame = -2
Query: 660 AVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYL 481
+VAC+DIGEYVRHYPRGKH++EQLGGKQ VM L H+DPNVRYEALLAVQKLMVHNWEYL
Sbjct: 461 SVACFDIGEYVRHYPRGKHVLEQLGGKQIVMQHLGHEDPNVRYEALLAVQKLMVHNWEYL 520
Query: 480 GKQLEKE-QIDKQAGTVVGAKA 418
GKQLEKE + KQ + KA
Sbjct: 521 GKQLEKENENQKQGAAPIAGKA 542
>AE014134-2754|AAF53555.2| 468|Drosophila melanogaster CG17332-PA,
isoform A protein.
Length = 468
Score = 136 bits (328), Expect = 3e-32
Identities = 62/82 (75%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Frame = -2
Query: 660 AVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYL 481
+VAC+DIGEYVRHYPRGKH++EQLGGKQ VM L H+DPNVRYEALLAVQKLMVHNWEYL
Sbjct: 387 SVACFDIGEYVRHYPRGKHVLEQLGGKQIVMQHLGHEDPNVRYEALLAVQKLMVHNWEYL 446
Query: 480 GKQLEKE-QIDKQAGTVVGAKA 418
GKQLEKE + KQ + KA
Sbjct: 447 GKQLEKENENQKQGAAPIAGKA 468
>AE014134-2756|AAN10957.1| 441|Drosophila melanogaster CG17332-PD,
isoform D protein.
Length = 441
Score = 102 bits (244), Expect = 5e-22
Identities = 45/54 (83%), Positives = 50/54 (92%)
Frame = -2
Query: 660 AVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMV 499
+VAC+DIGEYVRHYPRGKH++EQLGGKQ VM L H+DPNVRYEALLAVQKLMV
Sbjct: 387 SVACFDIGEYVRHYPRGKHVLEQLGGKQIVMQHLGHEDPNVRYEALLAVQKLMV 440
>AF159457-1|AAD47254.1| 392|Drosophila melanogaster vacuolar ATPase
SFD subunit protein.
Length = 392
Score = 42.7 bits (96), Expect = 4e-04
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -2
Query: 660 AVACYDIGEYVRHYPRGK 607
+VAC+DIGEYVRHYPRGK
Sbjct: 374 SVACFDIGEYVRHYPRGK 391
>AF520715-1|AAM55244.1| 4723|Drosophila melanogaster MICAL long
isoform protein.
Length = 4723
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 597 EQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQIDKQAGTVV 430
+ +GGK V L HD AL+ V LM+ N +Y+G + + +D A +V
Sbjct: 3508 QTVGGKHNVPRLEVHDTSG----ALMQVDSLMIVNGKYIGDPEDVKFLDMPANVIV 3559
>AF520714-1|AAM55243.1| 3002|Drosophila melanogaster MICAL medium
isoform protein.
Length = 3002
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 597 EQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQIDKQAGTVV 430
+ +GGK V L HD AL+ V LM+ N +Y+G + + +D A +V
Sbjct: 1787 QTVGGKHNVPRLEVHDTSG----ALMQVDSLMIVNGKYIGDPEDVKFLDMPANVIV 1838
>AF520713-1|AAM55242.1| 2734|Drosophila melanogaster MICAL short
isoform protein.
Length = 2734
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 597 EQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQIDKQAGTVV 430
+ +GGK V L HD AL+ V LM+ N +Y+G + + +D A +V
Sbjct: 1519 QTVGGKHNVPRLEVHDTSG----ALMQVDSLMIVNGKYIGDPEDVKFLDMPANVIV 1570
>AE014297-1071|AAO41537.1| 4723|Drosophila melanogaster CG33208-PH,
isoform H protein.
Length = 4723
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 597 EQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQIDKQAGTVV 430
+ +GGK V L HD AL+ V LM+ N +Y+G + + +D A +V
Sbjct: 3508 QTVGGKHNVPRLEVHDTSG----ALMQVDSLMIVNGKYIGDPEDVKFLDMPANVIV 3559
>AE014297-1070|AAO41536.1| 4723|Drosophila melanogaster CG33208-PG,
isoform G protein.
Length = 4723
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 597 EQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQIDKQAGTVV 430
+ +GGK V L HD AL+ V LM+ N +Y+G + + +D A +V
Sbjct: 3508 QTVGGKHNVPRLEVHDTSG----ALMQVDSLMIVNGKYIGDPEDVKFLDMPANVIV 3559
>AE014297-1069|AAO41535.1| 4723|Drosophila melanogaster CG33208-PF,
isoform F protein.
Length = 4723
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 597 EQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQIDKQAGTVV 430
+ +GGK V L HD AL+ V LM+ N +Y+G + + +D A +V
Sbjct: 3508 QTVGGKHNVPRLEVHDTSG----ALMQVDSLMIVNGKYIGDPEDVKFLDMPANVIV 3559
>AE014297-1068|AAO41534.1| 4723|Drosophila melanogaster CG33208-PD,
isoform D protein.
Length = 4723
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 597 EQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQIDKQAGTVV 430
+ +GGK V L HD AL+ V LM+ N +Y+G + + +D A +V
Sbjct: 3508 QTVGGKHNVPRLEVHDTSG----ALMQVDSLMIVNGKYIGDPEDVKFLDMPANVIV 3559
>AE014297-1067|AAO41533.1| 4723|Drosophila melanogaster CG33208-PC,
isoform C protein.
Length = 4723
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 597 EQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQIDKQAGTVV 430
+ +GGK V L HD AL+ V LM+ N +Y+G + + +D A +V
Sbjct: 3508 QTVGGKHNVPRLEVHDTSG----ALMQVDSLMIVNGKYIGDPEDVKFLDMPANVIV 3559
>AE014297-1066|AAO41532.1| 3002|Drosophila melanogaster CG33208-PB,
isoform B protein.
Length = 3002
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 597 EQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQIDKQAGTVV 430
+ +GGK V L HD AL+ V LM+ N +Y+G + + +D A +V
Sbjct: 1787 QTVGGKHNVPRLEVHDTSG----ALMQVDSLMIVNGKYIGDPEDVKFLDMPANVIV 1838
>AE014297-1065|AAO41531.1| 2734|Drosophila melanogaster CG33208-PE,
isoform E protein.
Length = 2734
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 597 EQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQIDKQAGTVV 430
+ +GGK V L HD AL+ V LM+ N +Y+G + + +D A +V
Sbjct: 1519 QTVGGKHNVPRLEVHDTSG----ALMQVDSLMIVNGKYIGDPEDVKFLDMPANVIV 1570
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,509,218
Number of Sequences: 53049
Number of extensions: 537768
Number of successful extensions: 902
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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