Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt13e15
         (633 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075202-1|AAL68070.1|  117|Drosophila melanogaster AT14009p pro...    85   8e-17
AF143200-1|AAD32690.1|  117|Drosophila melanogaster vacuolar pro...    85   8e-17
AE014297-2689|AAF55686.1|  117|Drosophila melanogaster CG6213-PA...    85   8e-17
BT025903-1|ABG02147.1|  464|Drosophila melanogaster IP03868p pro...    32   0.74 
AF044203-1|AAC02081.1|  569|Drosophila melanogaster calcium bind...    32   0.74 
AF034856-1|AAB87987.1|  534|Drosophila melanogaster EF-hand prot...    32   0.74 
AF011354-1|AAB65794.1|  543|Drosophila melanogaster calcium bind...    32   0.74 
AE014296-2962|AAF49304.3|  569|Drosophila melanogaster CG32190-P...    32   0.74 
BT023292-1|AAY55708.1|  361|Drosophila melanogaster IP02440p pro...    29   4.0  
AE014296-2309|AAN11812.1|  354|Drosophila melanogaster CG32136-P...    29   4.0  
AE014296-2308|AAN11811.1|  362|Drosophila melanogaster CG32136-P...    29   4.0  

>AY075202-1|AAL68070.1|  117|Drosophila melanogaster AT14009p
           protein.
          Length = 117

 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 36/60 (60%), Positives = 50/60 (83%)
 Frame = -2

Query: 587 FKEFEAKHMGTREGVAAKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINY 408
           FKEFEAKHMG+REGVAAKIDA+ +VK+ +M++ +QT+K+  I ++L  VY+I PE+H NY
Sbjct: 55  FKEFEAKHMGSREGVAAKIDADIRVKLADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114


>AF143200-1|AAD32690.1|  117|Drosophila melanogaster vacuolar
           proton-motive ATPasesubunit G VHA13 protein.
          Length = 117

 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 36/60 (60%), Positives = 50/60 (83%)
 Frame = -2

Query: 587 FKEFEAKHMGTREGVAAKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINY 408
           FKEFEAKHMG+REGVAAKIDA+ +VK+ +M++ +QT+K+  I ++L  VY+I PE+H NY
Sbjct: 55  FKEFEAKHMGSREGVAAKIDADIRVKLADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114


>AE014297-2689|AAF55686.1|  117|Drosophila melanogaster CG6213-PA
           protein.
          Length = 117

 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 36/60 (60%), Positives = 50/60 (83%)
 Frame = -2

Query: 587 FKEFEAKHMGTREGVAAKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINY 408
           FKEFEAKHMG+REGVAAKIDA+ +VK+ +M++ +QT+K+  I ++L  VY+I PE+H NY
Sbjct: 55  FKEFEAKHMGSREGVAAKIDADIRVKLADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114


>BT025903-1|ABG02147.1|  464|Drosophila melanogaster IP03868p
           protein.
          Length = 464

 Score = 31.9 bits (69), Expect = 0.74
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 620 LKSTDRSVKGQFKEFEAKHMGTREGVAAKIDAETKVKIE-EMNKMVQTQKE 471
           L   DR  +G+FKE+E +    RE    ++D E++ K E E+ +  +  K+
Sbjct: 160 LAEADRKRRGEFKEYEMQKEFEREAQKKEMDEESRKKFETELKEKEEKHKD 210


>AF044203-1|AAC02081.1|  569|Drosophila melanogaster calcium binding
           EF-hand proteinprecursor protein.
          Length = 569

 Score = 31.9 bits (69), Expect = 0.74
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 620 LKSTDRSVKGQFKEFEAKHMGTREGVAAKIDAETKVKIE-EMNKMVQTQKE 471
           L   DR  +G+FKE+E +    RE    ++D E++ K E E+ +  +  K+
Sbjct: 160 LAEADRKRRGEFKEYEMQKEFEREAQKKEMDEESRKKFETELKEKEEKHKD 210


>AF034856-1|AAB87987.1|  534|Drosophila melanogaster EF-hand protein
           NUCB1 protein.
          Length = 534

 Score = 31.9 bits (69), Expect = 0.74
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 620 LKSTDRSVKGQFKEFEAKHMGTREGVAAKIDAETKVKIE-EMNKMVQTQKE 471
           L   DR  +G+FKE+E +    RE    ++D E++ K E E+ +  +  K+
Sbjct: 160 LAEADRKRRGEFKEYEMQKEFEREAQKKEMDEESRKKFETELKEKEEKHKD 210


>AF011354-1|AAB65794.1|  543|Drosophila melanogaster calcium binding
           EF-hand protein protein.
          Length = 543

 Score = 31.9 bits (69), Expect = 0.74
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 620 LKSTDRSVKGQFKEFEAKHMGTREGVAAKIDAETKVKIE-EMNKMVQTQKE 471
           L   DR  +G+FKE+E +    RE    ++D E++ K E E+ +  +  K+
Sbjct: 160 LAEADRKRRGEFKEYEMQKEFEREAQKKEMDEESRKKFETELKEKEEKHKD 210


>AE014296-2962|AAF49304.3|  569|Drosophila melanogaster CG32190-PA
           protein.
          Length = 569

 Score = 31.9 bits (69), Expect = 0.74
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 620 LKSTDRSVKGQFKEFEAKHMGTREGVAAKIDAETKVKIE-EMNKMVQTQKE 471
           L   DR  +G+FKE+E +    RE    ++D E++ K E E+ +  +  K+
Sbjct: 160 LAEADRKRRGEFKEYEMQKEFEREAQKKEMDEESRKKFETELKEKEEKHKD 210


>BT023292-1|AAY55708.1|  361|Drosophila melanogaster IP02440p
           protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 472 SFCVWTILFISSILTLVSASILAATPSLVPMCL 570
           ++C  TI F+S ++ L++ S+L    +L P CL
Sbjct: 88  TYCFLTIYFLSVVVLLLTESVLCLAITLWPHCL 120


>AE014296-2309|AAN11812.1|  354|Drosophila melanogaster CG32136-PB,
           isoform B protein.
          Length = 354

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 472 SFCVWTILFISSILTLVSASILAATPSLVPMCL 570
           ++C  TI F+S ++ L++ S+L    +L P CL
Sbjct: 81  TYCFLTIYFLSVVVLLLTESVLCLAITLWPHCL 113


>AE014296-2308|AAN11811.1|  362|Drosophila melanogaster CG32136-PA,
           isoform A protein.
          Length = 362

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 472 SFCVWTILFISSILTLVSASILAATPSLVPMCL 570
           ++C  TI F+S ++ L++ S+L    +L P CL
Sbjct: 89  TYCFLTIYFLSVVVLLLTESVLCLAITLWPHCL 121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,913,112
Number of Sequences: 53049
Number of extensions: 400299
Number of successful extensions: 1002
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)