Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13e02
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007955-1|AAH07955.1| 919|Homo sapiens dehydrogenase E1 and tr... 249 6e-66
BC002477-1|AAH02477.1| 919|Homo sapiens dehydrogenase E1 and tr... 249 6e-66
AB046850-1|BAB13456.1| 901|Homo sapiens KIAA1630 protein protein. 229 5e-60
BC014617-1|AAH14617.1| 1023|Homo sapiens oxoglutarate (alpha-ket... 163 6e-40
BC004964-1|AAH04964.1| 1023|Homo sapiens oxoglutarate (alpha-ket... 163 6e-40
AC004859-1|AAQ96885.1| 1023|Homo sapiens unknown protein. 163 6e-40
D10523-1|BAA01393.1| 1002|Homo sapiens 2-oxoglutarate dehydrogen... 159 1e-38
D32064-1|BAA06836.1| 1002|Homo sapiens 2-oxoglutarate dehydrogen... 157 4e-38
BC026320-1|AAH26320.1| 1010|Homo sapiens oxoglutarate dehydrogen... 155 1e-37
AK001713-1|BAA91855.1| 1010|Homo sapiens protein ( Homo sapiens ... 155 1e-37
AB033116-1|BAA86604.2| 1011|Homo sapiens KIAA1290 protein protein. 155 1e-37
AF521644-1|AAO16026.1| 715|Homo sapiens BBS7 long isoform protein. 31 4.7
AC079341-4|AAY40970.1| 715|Homo sapiens unknown protein. 31 4.7
>BC007955-1|AAH07955.1| 919|Homo sapiens dehydrogenase E1 and
transketolase domain containing 1 protein.
Length = 919
Score = 249 bits (610), Expect = 6e-66
Identities = 119/214 (55%), Positives = 147/214 (68%), Gaps = 2/214 (0%)
Frame = -1
Query: 655 YDGAASEHSSCRLERFLQLTDSPESAPDSEAACLHVANPTTPAQYFHLLRRQVVRNYRKP 476
YDGA +HSSCR+ERFLQ+ DS E D + + V +PTTPAQYFHLLRRQ+VRN+RKP
Sbjct: 701 YDGAGPDHSSCRIERFLQMCDSAEEGVDGDTVNMFVVHPTTPAQYFHLLRRQMVRNFRKP 760
Query: 475 LIIVAPKLLLRLADAVSPLSDFAPRTHFQPVIGDGLADALKVKRVIFVSGKHYYELHKER 296
LI+ +PK+LLRL AVS L + AP T F PVIGD D KVK ++F SGKH+Y L K+R
Sbjct: 761 LIVASPKMLLRLPAAVSTLQEMAPGTTFNPVIGDSSVDPKKVKTLVFCSGKHFYSLVKQR 820
Query: 295 --VRARLEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWSFMKPRFE 122
+ A+ D AI+RVE L PFPL LQ ++SKYK+ IWSQEE +NMG WSF+ PRFE
Sbjct: 821 ESLGAKKHDFAIIRVEELCPFPLDSLQQEMSKYKHVKDHIWSQEEPQNMGPWSFVSPRFE 880
Query: 121 NLCGRKLVYAGRSEAPTPAVGASSLHRVEVEHVL 20
KL GR P PAVG ++H + E +L
Sbjct: 881 KQLACKLRLVGRPPLPVPAVGIGTVHLHQHEDIL 914
>BC002477-1|AAH02477.1| 919|Homo sapiens dehydrogenase E1 and
transketolase domain containing 1 protein.
Length = 919
Score = 249 bits (610), Expect = 6e-66
Identities = 119/214 (55%), Positives = 147/214 (68%), Gaps = 2/214 (0%)
Frame = -1
Query: 655 YDGAASEHSSCRLERFLQLTDSPESAPDSEAACLHVANPTTPAQYFHLLRRQVVRNYRKP 476
YDGA +HSSCR+ERFLQ+ DS E D + + V +PTTPAQYFHLLRRQ+VRN+RKP
Sbjct: 701 YDGAGPDHSSCRIERFLQMCDSAEEGVDGDTVNMFVVHPTTPAQYFHLLRRQMVRNFRKP 760
Query: 475 LIIVAPKLLLRLADAVSPLSDFAPRTHFQPVIGDGLADALKVKRVIFVSGKHYYELHKER 296
LI+ +PK+LLRL AVS L + AP T F PVIGD D KVK ++F SGKH+Y L K+R
Sbjct: 761 LIVASPKMLLRLPAAVSTLQEMAPGTTFNPVIGDSSVDPKKVKTLVFCSGKHFYSLVKQR 820
Query: 295 --VRARLEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWSFMKPRFE 122
+ A+ D AI+RVE L PFPL LQ ++SKYK+ IWSQEE +NMG WSF+ PRFE
Sbjct: 821 ESLGAKKHDFAIIRVEELCPFPLDSLQQEMSKYKHVKDHIWSQEEPQNMGPWSFVSPRFE 880
Query: 121 NLCGRKLVYAGRSEAPTPAVGASSLHRVEVEHVL 20
KL GR P PAVG ++H + E +L
Sbjct: 881 KQLACKLRLVGRPPLPVPAVGIGTVHLHQHEDIL 914
>AB046850-1|BAB13456.1| 901|Homo sapiens KIAA1630 protein protein.
Length = 901
Score = 229 bits (561), Expect = 5e-60
Identities = 107/180 (59%), Positives = 131/180 (72%), Gaps = 2/180 (1%)
Frame = -1
Query: 655 YDGAASEHSSCRLERFLQLTDSPESAPDSEAACLHVANPTTPAQYFHLLRRQVVRNYRKP 476
YDGA +HSSCR+ERFLQ+ DS E D + + V +PTTPAQYFHLLRRQ+VRN+RKP
Sbjct: 713 YDGAGPDHSSCRIERFLQMCDSAEEGVDGDTVNMFVVHPTTPAQYFHLLRRQMVRNFRKP 772
Query: 475 LIIVAPKLLLRLADAVSPLSDFAPRTHFQPVIGDGLADALKVKRVIFVSGKHYYELHKER 296
LI+ +PK+LLRL AVS L + AP T F PVIGD D KVK ++F SGKH+Y L K+R
Sbjct: 773 LIVASPKMLLRLPAAVSTLQEMAPGTTFNPVIGDSSVDPKKVKTLVFCSGKHFYSLVKQR 832
Query: 295 --VRARLEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWSFMKPRFE 122
+ A+ D AI+RVE L PFPL LQ ++SKYK+ IWSQEE +NMG WSF+ PRFE
Sbjct: 833 ESLGAKKHDFAIIRVEELCPFPLDSLQQEMSKYKHVKDHIWSQEEPQNMGPWSFVSPRFE 892
>BC014617-1|AAH14617.1| 1023|Homo sapiens oxoglutarate
(alpha-ketoglutarate) dehydrogenase (lipoamide) protein.
Length = 1023
Score = 163 bits (395), Expect = 6e-40
Identities = 95/228 (41%), Positives = 127/228 (55%), Gaps = 17/228 (7%)
Frame = -1
Query: 652 DGAASEHSSCRLERFLQL-TDSPESAPDSEAACLH----------VANPTTPAQYFHLLR 506
+G EHSS R ERFLQ+ D P+ PD + A V N +TP +FH+LR
Sbjct: 784 EGMGPEHSSARPERFLQMCNDDPDVLPDLKEANFDINQLYDCNWVVVNCSTPGNFFHVLR 843
Query: 505 RQVVRNYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI---GDGLADALKVKRVIF 335
RQ++ +RKPLII PK LLR +A S + P THFQ VI G + VKR++F
Sbjct: 844 RQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFQRVIPEDGPAAQNPENVKRLLF 903
Query: 334 VSGKHYYELHKER-VRARLEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRN 158
+GK YY+L +ER R + VAI R+E L+PFP L ++ KY NA + W QEEH+N
Sbjct: 904 CTGKVYYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKN 962
Query: 157 MGAWSFMKPRFENLCGR--KLVYAGRSEAPTPAVGASSLHRVEVEHVL 20
G + ++KPR R + YAGR A PA G H E++ +L
Sbjct: 963 QGYYDYVKPRLRTTISRAKPVWYAGRDPAAAPATGNKKTHLTELQRLL 1010
>BC004964-1|AAH04964.1| 1023|Homo sapiens oxoglutarate
(alpha-ketoglutarate) dehydrogenase (lipoamide) protein.
Length = 1023
Score = 163 bits (395), Expect = 6e-40
Identities = 95/228 (41%), Positives = 127/228 (55%), Gaps = 17/228 (7%)
Frame = -1
Query: 652 DGAASEHSSCRLERFLQL-TDSPESAPDSEAACLH----------VANPTTPAQYFHLLR 506
+G EHSS R ERFLQ+ D P+ PD + A V N +TP +FH+LR
Sbjct: 784 EGMGPEHSSARPERFLQMCNDDPDVLPDLKEANFDINQLYDCNWVVVNCSTPGNFFHVLR 843
Query: 505 RQVVRNYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI---GDGLADALKVKRVIF 335
RQ++ +RKPLII PK LLR +A S + P THFQ VI G + VKR++F
Sbjct: 844 RQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFQRVIPEDGPAAQNPENVKRLLF 903
Query: 334 VSGKHYYELHKER-VRARLEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRN 158
+GK YY+L +ER R + VAI R+E L+PFP L ++ KY NA + W QEEH+N
Sbjct: 904 CTGKVYYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKN 962
Query: 157 MGAWSFMKPRFENLCGR--KLVYAGRSEAPTPAVGASSLHRVEVEHVL 20
G + ++KPR R + YAGR A PA G H E++ +L
Sbjct: 963 QGYYDYVKPRLRTTISRAKPVWYAGRDPAAAPATGNKKTHLTELQRLL 1010
>AC004859-1|AAQ96885.1| 1023|Homo sapiens unknown protein.
Length = 1023
Score = 163 bits (395), Expect = 6e-40
Identities = 95/228 (41%), Positives = 127/228 (55%), Gaps = 17/228 (7%)
Frame = -1
Query: 652 DGAASEHSSCRLERFLQL-TDSPESAPDSEAACLH----------VANPTTPAQYFHLLR 506
+G EHSS R ERFLQ+ D P+ PD + A V N +TP +FH+LR
Sbjct: 784 EGMGPEHSSARPERFLQMCNDDPDVLPDLKEANFDINQLYDCNWVVVNCSTPGNFFHVLR 843
Query: 505 RQVVRNYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI---GDGLADALKVKRVIF 335
RQ++ +RKPLII PK LLR +A S + P THFQ VI G + VKR++F
Sbjct: 844 RQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFQRVIPEDGPAAQNPENVKRLLF 903
Query: 334 VSGKHYYELHKER-VRARLEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRN 158
+GK YY+L +ER R + VAI R+E L+PFP L ++ KY NA + W QEEH+N
Sbjct: 904 CTGKVYYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKN 962
Query: 157 MGAWSFMKPRFENLCGR--KLVYAGRSEAPTPAVGASSLHRVEVEHVL 20
G + ++KPR R + YAGR A PA G H E++ +L
Sbjct: 963 QGYYDYVKPRLRTTISRAKPVWYAGRDPAAAPATGNKKTHLTELQRLL 1010
>D10523-1|BAA01393.1| 1002|Homo sapiens 2-oxoglutarate dehydrogenase
precursor protein.
Length = 1002
Score = 159 bits (385), Expect = 1e-38
Identities = 93/220 (42%), Positives = 123/220 (55%), Gaps = 17/220 (7%)
Frame = -1
Query: 652 DGAASEHSSCRLERFLQL-TDSPESAPDSEAACLH----------VANPTTPAQYFHLLR 506
+G EHSS R ERFLQ+ D P+ PD + A V N +TP +FH+LR
Sbjct: 784 EGMGPEHSSARPERFLQMCNDDPDVLPDLKEANFDINQLYDCNWVVVNCSTPGNFFHVLR 843
Query: 505 RQVVRNYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI---GDGLADALKVKRVIF 335
RQ++ +RKPLII PK LLR +A S + P THFQ VI G + VKR++F
Sbjct: 844 RQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFQRVIPEDGPAAQNPENVKRLLF 903
Query: 334 VSGKHYYELHKER-VRARLEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRN 158
+GK YY+L +ER R + VAI R+E L+PFP L ++ KY NA + W QEEH+N
Sbjct: 904 CTGKVYYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKN 962
Query: 157 MGAWSFMKPRFENLCGR--KLVYAGRSEAPTPAVGASSLH 44
G + ++KPR R + YAGR+ A PA G H
Sbjct: 963 QGYYDYVKPRLRTTISRAKPVWYAGRNPAAAPATGNKKTH 1002
>D32064-1|BAA06836.1| 1002|Homo sapiens 2-oxoglutarate dehydrogenase
protein.
Length = 1002
Score = 157 bits (380), Expect = 4e-38
Identities = 92/220 (41%), Positives = 123/220 (55%), Gaps = 17/220 (7%)
Frame = -1
Query: 652 DGAASEHSSCRLERFLQL-TDSPESAPDSEAACLH----------VANPTTPAQYFHLLR 506
+G EHSS R ERFLQ+ D P+ PD + A V + +TP +FH+LR
Sbjct: 784 EGMGPEHSSARPERFLQMCNDDPDVLPDLKEANFDINQLYDCNWVVVDCSTPGNFFHVLR 843
Query: 505 RQVVRNYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI---GDGLADALKVKRVIF 335
RQ++ +RKPLII PK LLR +A S + P THFQ VI G + VKR++F
Sbjct: 844 RQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFQRVIPEDGPAAQNPENVKRLLF 903
Query: 334 VSGKHYYELHKER-VRARLEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRN 158
+GK YY+L +ER R + VAI R+E L+PFP L ++ KY NA + W QEEH+N
Sbjct: 904 CTGKVYYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKN 962
Query: 157 MGAWSFMKPRFENLCGR--KLVYAGRSEAPTPAVGASSLH 44
G + ++KPR R + YAGR+ A PA G H
Sbjct: 963 QGYYDYVKPRLRTTISRAKPVWYAGRNPAAAPATGNKKTH 1002
>BC026320-1|AAH26320.1| 1010|Homo sapiens oxoglutarate
dehydrogenase-like protein.
Length = 1010
Score = 155 bits (377), Expect = 1e-37
Identities = 95/227 (41%), Positives = 129/227 (56%), Gaps = 16/227 (7%)
Frame = -1
Query: 652 DGAASEHSSCRLERFLQLTDS-----PESAPDSEAACLH-----VANPTTPAQYFHLLRR 503
+G EHSS R ERFLQ+++ P D E + L+ V N +TPA YFH+LRR
Sbjct: 771 EGMGPEHSSARPERFLQMSNDDSDAYPAFTKDFEVSQLYDCNWIVVNCSTPANYFHVLRR 830
Query: 502 QVVRNYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI-GDGLADAL--KVKRVIFV 332
Q++ +RKPLII PK LLR +A S T FQ VI DG A +V+R+IF
Sbjct: 831 QILLPFRKPLIIFTPKSLLRHPEAKSSFDQMVSGTSFQRVIPEDGAAARAPEQVQRLIFC 890
Query: 331 SGKHYYELHKERVRARLED-VAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNM 155
+GK YY+L KER LE+ VAI R+E ++PFP ++ + KY A + W QEEH+NM
Sbjct: 891 TGKVYYDLVKERSSQDLEEKVAITRLEQISPFPFDLIKQEAEKYPGA-ELAWCQEEHKNM 949
Query: 154 GAWSFMKPRFENLC--GRKLVYAGRSEAPTPAVGASSLHRVEVEHVL 20
G + ++ PRF + R + Y GR A PA G + H V ++ L
Sbjct: 950 GYYDYISPRFMTILRRARPIWYVGRDPAAAPATGNRNTHLVSLKKFL 996
>AK001713-1|BAA91855.1| 1010|Homo sapiens protein ( Homo sapiens cDNA
FLJ10851 fis, clone NT2RP4001483, moderately similar to
2-OXOGLUTARATE DEHYDROGENASE E1 COMPONENT PRECURSOR (EC
).
Length = 1010
Score = 155 bits (377), Expect = 1e-37
Identities = 95/227 (41%), Positives = 129/227 (56%), Gaps = 16/227 (7%)
Frame = -1
Query: 652 DGAASEHSSCRLERFLQLTDS-----PESAPDSEAACLH-----VANPTTPAQYFHLLRR 503
+G EHSS R ERFLQ+++ P D E + L+ V N +TPA YFH+LRR
Sbjct: 771 EGMGPEHSSARPERFLQMSNDDSDAYPAFTKDFEVSQLYDCNWIVVNCSTPANYFHVLRR 830
Query: 502 QVVRNYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI-GDGLADAL--KVKRVIFV 332
Q++ +RKPLII PK LLR +A S T FQ VI DG A +V+R+IF
Sbjct: 831 QILLPFRKPLIIFTPKSLLRHPEAKSSFDQMVSGTSFQRVIPEDGAAARAPEQVQRLIFC 890
Query: 331 SGKHYYELHKERVRARLED-VAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNM 155
+GK YY+L KER LE+ VAI R+E ++PFP ++ + KY A + W QEEH+NM
Sbjct: 891 TGKVYYDLVKERSSQDLEEKVAITRLEQISPFPFDLIKQEAEKYPGA-ELAWCQEEHKNM 949
Query: 154 GAWSFMKPRFENLC--GRKLVYAGRSEAPTPAVGASSLHRVEVEHVL 20
G + ++ PRF + R + Y GR A PA G + H V ++ L
Sbjct: 950 GYYDYISPRFMTILRRARPIWYVGRDPAAAPATGNRNTHLVSLKKFL 996
>AB033116-1|BAA86604.2| 1011|Homo sapiens KIAA1290 protein protein.
Length = 1011
Score = 155 bits (377), Expect = 1e-37
Identities = 95/227 (41%), Positives = 129/227 (56%), Gaps = 16/227 (7%)
Frame = -1
Query: 652 DGAASEHSSCRLERFLQLTDS-----PESAPDSEAACLH-----VANPTTPAQYFHLLRR 503
+G EHSS R ERFLQ+++ P D E + L+ V N +TPA YFH+LRR
Sbjct: 772 EGMGPEHSSARPERFLQMSNDDSDAYPAFTKDFEVSQLYDCNWIVVNCSTPANYFHVLRR 831
Query: 502 QVVRNYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI-GDGLADAL--KVKRVIFV 332
Q++ +RKPLII PK LLR +A S T FQ VI DG A +V+R+IF
Sbjct: 832 QILLPFRKPLIIFTPKSLLRHPEAKSSFDQMVSGTSFQRVIPEDGAAARAPEQVQRLIFC 891
Query: 331 SGKHYYELHKERVRARLED-VAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNM 155
+GK YY+L KER LE+ VAI R+E ++PFP ++ + KY A + W QEEH+NM
Sbjct: 892 TGKVYYDLVKERSSQDLEEKVAITRLEQISPFPFDLIKQEAEKYPGA-ELAWCQEEHKNM 950
Query: 154 GAWSFMKPRFENLC--GRKLVYAGRSEAPTPAVGASSLHRVEVEHVL 20
G + ++ PRF + R + Y GR A PA G + H V ++ L
Sbjct: 951 GYYDYISPRFMTILRRARPIWYVGRDPAAAPATGNRNTHLVSLKKFL 997
>AF521644-1|AAO16026.1| 715|Homo sapiens BBS7 long isoform protein.
Length = 715
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 257 HPHNGHVLQPRPHALLMQLVVMLTAYKDHPLHFQRISQTVTDYWLE 394
H N + L P H +L + + YK P H +R+ +TD +++
Sbjct: 635 HEGNTNFLIPEYHCILEEADHLQEEYKKQPAHLERLYGMITDLFID 680
>AC079341-4|AAY40970.1| 715|Homo sapiens unknown protein.
Length = 715
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 257 HPHNGHVLQPRPHALLMQLVVMLTAYKDHPLHFQRISQTVTDYWLE 394
H N + L P H +L + + YK P H +R+ +TD +++
Sbjct: 635 HEGNTNFLIPEYHCILEEADHLQEEYKKQPAHLERLYGMITDLFID 680
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,918,472
Number of Sequences: 237096
Number of extensions: 2140327
Number of successful extensions: 9456
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9414
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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