Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13d21
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 379 e-105
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 379 e-105
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 379 e-105
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 156 1e-38
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 156 1e-38
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 120 1e-27
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 100 1e-21
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 77 2e-14
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 72 5e-13
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 66 3e-11
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 66 3e-11
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 58 7e-09
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 45 5e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 42 5e-04
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 42 5e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 37 0.014
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.058
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 34 0.10
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 34 0.13
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 34 0.13
AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated... 34 0.13
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 34 0.13
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 33 0.18
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 33 0.23
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 30 2.2
AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical ... 29 2.9
AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical... 29 3.8
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 28 6.6
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 8.8
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 8.8
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 28 8.8
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 8.8
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 93 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 213 IQKESTLHLVLRLRGGM 229
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 169 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 289 IQKESTLHLVLRLRGGM 305
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 245 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 365 IQKESTLHLVLRLRGGM 381
Score = 376 bits (926), Expect = e-105
Identities = 187/197 (94%), Positives = 188/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 320
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 321 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 441 IQKESTLHLVLRLRGGM 457
Score = 316 bits (775), Expect = 2e-86
Identities = 157/167 (94%), Positives = 158/167 (94%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTL GKTITLE
Sbjct: 337 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLE 396
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 397 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 172
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
Score = 310 bits (761), Expect = 8e-85
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 361
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 360 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 181
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 180 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 82
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 93 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 213 IQKESTLHLVLRLRGGM 229
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 169 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 289 IQKESTLHLVLRLRGGM 305
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 245 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 365 IQKESTLHLVLRLRGGM 381
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 413 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 472
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 473 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 593 IQKESTLHLVLRLRGGM 609
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 489 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 548
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 549 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 669 IQKESTLHLVLRLRGGM 685
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 565 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 624
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 625 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 745 IQKESTLHLVLRLRGGM 761
Score = 377 bits (927), Expect = e-105
Identities = 187/196 (95%), Positives = 188/196 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 641 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 700
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 701 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 132 IQKESTLHLVLRLRGG 85
IQKESTLHLVLRLRGG
Sbjct: 821 IQKESTLHLVLRLRGG 836
Score = 376 bits (926), Expect = e-105
Identities = 187/197 (94%), Positives = 188/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 320
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 321 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 441 IQKESTLHLVLRLRGGM 457
Score = 376 bits (926), Expect = e-105
Identities = 187/197 (94%), Positives = 188/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTL GKTITLE
Sbjct: 337 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLE 396
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 397 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 517 IQKESTLHLVLRLRGGM 533
Score = 310 bits (761), Expect = 8e-85
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 361
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 360 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 181
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 180 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 82
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 93 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 213 IQKESTLHLVLRLRGGM 229
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 169 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 289 IQKESTLHLVLRLRGGM 305
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 245 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 365 IQKESTLHLVLRLRGGM 381
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 320
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 321 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 441 IQKESTLHLVLRLRGGM 457
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 337 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 396
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 397 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 517 IQKESTLHLVLRLRGGM 533
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 413 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 472
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 473 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 593 IQKESTLHLVLRLRGGM 609
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 489 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 548
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 549 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 669 IQKESTLHLVLRLRGGM 685
Score = 379 bits (932), Expect = e-105
Identities = 188/197 (95%), Positives = 189/197 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 565 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 624
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 625 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGGM
Sbjct: 745 IQKESTLHLVLRLRGGM 761
Score = 376 bits (924), Expect = e-104
Identities = 186/196 (94%), Positives = 188/196 (95%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLE 493
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 641 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 700
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 313
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 701 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 132 IQKESTLHLVLRLRGG 85
IQK+STLHLVLRLRGG
Sbjct: 821 IQKQSTLHLVLRLRGG 836
Score = 310 bits (761), Expect = 8e-85
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 361
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 360 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 181
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 180 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 82
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 156 bits (379), Expect = 1e-38
Identities = 76/77 (98%), Positives = 77/77 (100%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 361
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 360 IQKESTLHLVLRLRGGM 310
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 156 bits (379), Expect = 1e-38
Identities = 76/77 (98%), Positives = 77/77 (100%)
Frame = -1
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/45 (77%), Positives = 37/45 (82%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGM 538
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGG+
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 156 bits (379), Expect = 1e-38
Identities = 76/77 (98%), Positives = 77/77 (100%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 361
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 360 IQKESTLHLVLRLRGGM 310
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 156 bits (379), Expect = 1e-38
Identities = 76/77 (98%), Positives = 77/77 (100%)
Frame = -1
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 132 IQKESTLHLVLRLRGGM 82
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/45 (77%), Positives = 37/45 (82%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGGM 538
KEGIPPDQ RL FAG QLEDGRTLS +ESTLHLVLRLRGG+
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 120 bits (289), Expect = 1e-27
Identities = 63/143 (44%), Positives = 92/143 (64%)
Frame = -1
Query: 519 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 340
+TG IT VEASD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 339 HLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 160
L + ++ + + VKTL GKTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE
Sbjct: 152 RLEVPVKEKLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLE 211
Query: 159 DGRTLSDYNIQKESTLHLVLRLR 91
+ R L YNI+ E +HLV R R
Sbjct: 212 NDRALFAYNIRDEDIIHLVSRHR 234
Score = 95.9 bits (228), Expect = 3e-20
Identities = 47/100 (47%), Positives = 66/100 (66%)
Frame = -1
Query: 618 EDGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 439
+D RT+S STL L + ++ + + VKTL GKTI + ++ +DT+E +K K+Q+K
Sbjct: 135 KDQRTISDYNIKNGSTLRLEVPVKEKLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKH 194
Query: 438 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 319
G+PPDQQRLIF QLE+ R L YNI+ E +HLV R R
Sbjct: 195 GVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLVSRHR 234
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLR 547
K G+PPDQ RL F QLE+ R L +E +HLV R R
Sbjct: 193 KHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLVSRHR 234
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 433
M + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 59 MLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -1
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 205
M + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 59 MLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 100 bits (240), Expect = 1e-21
Identities = 46/76 (60%), Positives = 58/76 (76%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 361
M I VKTLTGK I L++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 360 IQKESTLHLVLRLRGG 313
+ S LHLVL LRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
Score = 100 bits (240), Expect = 1e-21
Identities = 46/76 (60%), Positives = 58/76 (76%)
Frame = -1
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
M I VKTLTGK I L++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 132 IQKESTLHLVLRLRGG 85
+ S LHLVL LRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
Score = 51.2 bits (117), Expect = 8e-07
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = -1
Query: 672 KEGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGG 541
KEGIPP Q RL FAG Q+ D +T + + S LHLVL LRGG
Sbjct: 33 KEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 430
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = -1
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 202
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 71.7 bits (168), Expect = 5e-13
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Frame = -1
Query: 543 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTL 373
G++I+V+ G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL
Sbjct: 102 GIRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTL 160
Query: 372 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 262
D + + STL L + + + +FVKT TGKTIT+ +
Sbjct: 161 FDNSFENGSTLRLEVSIEKEIDVFVKTYTGKTITISI 197
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Frame = -1
Query: 492 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGK-QLEDGRTLSDYNIQKESTLHLVLRLRG 316
+E DT+++VK IQ+ + P + + +E + + N++ T +
Sbjct: 46 IEMEDTVQDVK--IQEAQQAPLRESEEVTEDPISVESSEVIGNLNVKVAETQQELHH--E 101
Query: 315 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTL 145
G++I+V+ G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL
Sbjct: 102 GIRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTL 160
Query: 144 SDYNIQKESTLHL 106
D + + STL L
Sbjct: 161 FDNSFENGSTLRL 173
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -1
Query: 615 DGRTLSXLQHPEESTLHLVLRLRGGMQIFVKTLTGKTITLEV 490
D TL STL L + + + +FVKT TGKTIT+ +
Sbjct: 156 DHSTLFDNSFENGSTLRLEVSIEKEIDVFVKTYTGKTITISI 197
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 433
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -1
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 205
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 66.1 bits (154), Expect = 3e-11
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = -1
Query: 534 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 355
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 354 KESTLHLVLRLRGG 313
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
Score = 66.1 bits (154), Expect = 3e-11
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = -1
Query: 306 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 127
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 126 KESTLHLVLRLRGG 85
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1
Query: 669 EGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGG 541
EGIP ++ RL +AG QLED S E+T+++ L L GG
Sbjct: 32 EGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 66.1 bits (154), Expect = 3e-11
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = -1
Query: 534 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 355
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 354 KESTLHLVLRLRGG 313
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
Score = 66.1 bits (154), Expect = 3e-11
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = -1
Query: 306 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 127
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 126 KESTLHLVLRLRGG 85
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1
Query: 669 EGIPPDQPRLXFAGNQLEDGRTLSXLQHPEESTLHLVLRLRGG 541
EGIP ++ RL +AG QLED S E+T+++ L L GG
Sbjct: 32 EGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 58.0 bits (134), Expect = 7e-09
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = -1
Query: 537 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 358
QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 357 QKESTLHLVLR 325
QK ST+ + R
Sbjct: 214 QKSSTITMYFR 224
Score = 58.0 bits (134), Expect = 7e-09
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = -1
Query: 309 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 130
QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 129 QKESTLHLVLR 97
QK ST+ + R
Sbjct: 214 QKSSTITMYFR 224
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/72 (40%), Positives = 38/72 (52%)
Frame = -1
Query: 537 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 358
Q FV+ L GKT TL V ASDT+E K ++ R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 357 QKESTLHLVLRL 322
ST+ L R+
Sbjct: 99 SNNSTMDLHFRI 110
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/72 (40%), Positives = 38/72 (52%)
Frame = -1
Query: 309 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 130
Q FV+ L GKT TL V ASDT+E K ++ R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 129 QKESTLHLVLRL 94
ST+ L R+
Sbjct: 99 SNNSTMDLHFRI 110
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = -1
Query: 534 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 397
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = -1
Query: 306 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 169
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = -1
Query: 516 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 337
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 336 L 334
L
Sbjct: 241 L 241
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = -1
Query: 288 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 109
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 108 L 106
L
Sbjct: 241 L 241
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = -1
Query: 519 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 340
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 339 HLVLRLRGG 313
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = -1
Query: 291 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 112
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 111 HLVLRLRGG 85
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = -1
Query: 519 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 340
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 339 HLVLRLRGG 313
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = -1
Query: 291 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 112
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 111 HLVLRLRGG 85
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = -1
Query: 498 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 319
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = -1
Query: 270 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 91
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = -1
Query: 498 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 340
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = -1
Query: 270 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 112
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 367
+ + +TLT LE+ TI VKA + ++G P+ Q+LI+ GK L+D + +
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGE 111
Query: 366 YNIQKESTLHLVLRLR 319
+ ++L R
Sbjct: 112 VGFDSSKFVVVMLSKR 127
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 139
+ + +TLT LE+ TI VKA + ++G P+ Q+LI+ GK L+D + +
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGE 111
Query: 138 YNIQKESTLHLVLRLR 91
+ ++L R
Sbjct: 112 VGFDSSKFVVVMLSKR 127
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.058
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = -1
Query: 522 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 343
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 342 LHLVLR 325
+ L++R
Sbjct: 207 VELLVR 212
Score = 35.1 bits (77), Expect = 0.058
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = -1
Query: 294 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 115
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 114 LHLVLR 97
+ L++R
Sbjct: 207 VELLVR 212
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = -1
Query: 525 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 346
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 345 TLHLV 331
+ L+
Sbjct: 73 QIMLL 77
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = -1
Query: 297 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 118
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 117 TLHLV 103
+ L+
Sbjct: 73 QIMLL 77
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Frame = +2
Query: 320 RSLKTKCRVDSFWML*SDSVRPSSSCFPAKINRC-----*SGGIPSLS*ILAFTF--SMV 478
RS K C++D W SD SSSC + C +GG P L + +
Sbjct: 265 RSCKVPCKLDGGWSSWSDWSACSSSCHRYRTRACTVPPPMNGGQPCFGDDLMTQECPAQL 324
Query: 479 SDASTSNVMVLPVSVFTKICIPPLRRNTKCRVDSSGCCSXDNVRPSSSWLPAKXNRG*SG 658
A +S +++ +V+ + + + + + CC N + S P K N +G
Sbjct: 325 CTADSSRIVISDTAVYGSVASIFIVASFILAILAMFCCKRGNSKKSKPLKPQKMNSEKAG 384
Query: 659 GI 664
GI
Sbjct: 385 GI 386
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Frame = +2
Query: 320 RSLKTKCRVDSFWML*SDSVRPSSSCFPAKINRC-----*SGGIPSLS*ILAFTF--SMV 478
RS K C++D W SD SSSC + C +GG P L + +
Sbjct: 293 RSCKVPCKLDGGWSSWSDWSACSSSCHRYRTRACTVPPPMNGGQPCFGDDLMTQECPAQL 352
Query: 479 SDASTSNVMVLPVSVFTKICIPPLRRNTKCRVDSSGCCSXDNVRPSSSWLPAKXNRG*SG 658
A +S +++ +V+ + + + + + CC N + S P K N +G
Sbjct: 353 CTADSSRIVISDTAVYGSVASIFIVASFILAILAMFCCKRGNSKKSKPLKPQKMNSEKAG 412
Query: 659 GI 664
GI
Sbjct: 413 GI 414
>AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated
protein 5, isoform b protein.
Length = 567
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Frame = +2
Query: 320 RSLKTKCRVDSFWML*SDSVRPSSSCFPAKINRC-----*SGGIPSLS*ILAFTF--SMV 478
RS K C++D W SD SSSC + C +GG P L + +
Sbjct: 265 RSCKVPCKLDGGWSSWSDWSACSSSCHRYRTRACTVPPPMNGGQPCFGDDLMTQECPAQL 324
Query: 479 SDASTSNVMVLPVSVFTKICIPPLRRNTKCRVDSSGCCSXDNVRPSSSWLPAKXNRG*SG 658
A +S +++ +V+ + + + + + CC N + S P K N +G
Sbjct: 325 CTADSSRIVISDTAVYGSVASIFIVASFILAILAMFCCKRGNSKKSKPLKPQKMNSEKAG 384
Query: 659 GI 664
GI
Sbjct: 385 GI 386
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Frame = +2
Query: 320 RSLKTKCRVDSFWML*SDSVRPSSSCFPAKINRC-----*SGGIPSLS*ILAFTF--SMV 478
RS K C++D W SD SSSC + C +GG P L + +
Sbjct: 265 RSCKVPCKLDGGWSSWSDWSACSSSCHRYRTRACTVPPPMNGGQPCFGDDLMTQECPAQL 324
Query: 479 SDASTSNVMVLPVSVFTKICIPPLRRNTKCRVDSSGCCSXDNVRPSSSWLPAKXNRG*SG 658
A +S +++ +V+ + + + + + CC N + S P K N +G
Sbjct: 325 CTADSSRIVISDTAVYGSVASIFIVASFILAILAMFCCKRGNSKKSKPLKPQKMNSEKAG 384
Query: 659 GI 664
GI
Sbjct: 385 GI 386
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 361
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 360 IQKESTLHLVLR 325
I T+HLV R
Sbjct: 81 ISDGQTVHLVDR 92
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -1
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 132 IQKESTLHLVLR 97
I T+HLV R
Sbjct: 81 ISDGQTVHLVDR 92
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 361
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 360 IQKESTLHLVLR 325
I T+HLV R
Sbjct: 81 ISDGQTVHLVDR 92
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -1
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 133
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 132 IQKESTLHLVLR 97
I T+HLV R
Sbjct: 81 ISDGQTVHLVDR 92
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -1
Query: 519 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 340
L G I +E+++ DTI V + G+ +QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -1
Query: 291 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 112
L G I +E+++ DTI V + G+ +QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.9 bits (64), Expect = 2.2
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 364
M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 363 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIEN 238
IQ+ LR ++ TG I +VEASDT N
Sbjct: 56 KIQEAQQ----APLRESEEV-----TGDPI--KVEASDTNRN 86
>AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical
protein F52H2.6 protein.
Length = 525
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 198 PEEFPLCPESWLSHFRWCQMLQ--LPM*WFYR*VF*QRSACHHAV-SKPNA 341
P + C E + HFRW ++ LP+ + + VF R+ HAV S PNA
Sbjct: 11 PTRWEKCVEFIMFHFRWVFVVPFLLPLSFLFNTVFDFRNRIVHAVNSAPNA 61
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 426 PEEFPLCPEFWLSHFRWCQMLQ--LPM*WFYR*VFSQKSAF-HL*DVTPNA 569
P + C EF + HFRW ++ LP+ + + VF ++ H + PNA
Sbjct: 11 PTRWEKCVEFIMFHFRWVFVVPFLLPLSFLFNTVFDFRNRIVHAVNSAPNA 61
>AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical
protein F57B10.4 protein.
Length = 691
Score = 29.1 bits (62), Expect = 3.8
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -1
Query: 495 EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS-DYNIQKESTLHLVLRLR 319
E E S++I N++A ++D + ++ QLE+ + + +K+S + V R
Sbjct: 288 EAENSESIINLEASLEDIKYQNKKVRKSFDQINQLENAYIVKKEVLTRKKSAIEDVKRQI 347
Query: 318 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD 217
+I + L K VE SDT ENV++K ++
Sbjct: 348 AESKITLNKL--KVTVRAVERSDTPENVESKKEE 379
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 498 LEVEASDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 334
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYL 155
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 270 LEVEASDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 106
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYL 155
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/52 (21%), Positives = 28/52 (53%)
Frame = -1
Query: 540 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 385
+Q+ + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/52 (21%), Positives = 28/52 (53%)
Frame = -1
Query: 312 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 157
+Q+ + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 317 PRSLKTKCRVDSFWML*SDSVRPSSSCFPAKINRC*SG 430
P S K +CR D S RP C PA ++ C +G
Sbjct: 1400 PESYKCRCRDDFVDESPDSSRRPGRICRPALVDECRTG 1437
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 317 PRSLKTKCRVDSFWML*SDSVRPSSSCFPAKINRC*SG 430
P S K +CR D S RP C PA ++ C +G
Sbjct: 1984 PESYKCRCRDDFVDESPDSSRRPGRICRPALVDECRTG 2021
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 317 PRSLKTKCRVDSFWML*SDSVRPSSSCFPAKINRC*SG 430
P S K +CR D S RP C PA ++ C +G
Sbjct: 1400 PESYKCRCRDDFVDESPDSSRRPGRICRPALVDECRTG 1437
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 317 PRSLKTKCRVDSFWML*SDSVRPSSSCFPAKINRC*SG 430
P S K +CR D S RP C PA ++ C +G
Sbjct: 1984 PESYKCRCRDDFVDESPDSSRRPGRICRPALVDECRTG 2021
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -1
Query: 414 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 235
L F G G LSD + + R +G ++ K++ G + LE E ++ ++ +
Sbjct: 409 LPFVGFSYTHGSLLSDARSLTDEIRAIAQRCQGDAELMEKSVDGFMVELENEKAELVQKL 468
Query: 234 K 232
K
Sbjct: 469 K 469
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 317 PRSLKTKCRVDSFWML*SDSVRPSSSCFPAKINRC*SG 430
P S K +CR D S RP C PA ++ C +G
Sbjct: 1984 PESYKCRCRDDFVDESPDSSRRPGRICRPALVDECRTG 2021
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,644,075
Number of Sequences: 27780
Number of extensions: 373362
Number of successful extensions: 1141
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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