Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt13c24
         (593 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025275-1|AAH25275.1|  483|Homo sapiens ATPase, H+ transporting...    75   2e-13
AF298777-1|AAG22809.1|  483|Homo sapiens vacuolar ATPase subunit...    75   2e-13
AF132945-1|AAD27720.1|  483|Homo sapiens CGI-11 protein protein.       75   2e-13
AF112204-1|AAF17192.1|  483|Homo sapiens Vacuolar proton pump su...    75   2e-13
AF125105-1|AAL75942.1|  476|Homo sapiens vacuolar proton pump su...    56   7e-08
AF294629-1|AAG23961.1|  410|Homo sapiens aristaless-like 4 protein.    30   7.1  

>BC025275-1|AAH25275.1|  483|Homo sapiens ATPase, H+ transporting,
           lysosomal 50/57kDa, V1 subunit H protein.
          Length = 483

 Score = 74.9 bits (176), Expect = 2e-13
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = -3

Query: 591 LGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQ 457
           LGGKQ VM  + H+D  VRY ALLAVQKLMVHNWEYLGKQL+ EQ
Sbjct: 431 LGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSEQ 475


>AF298777-1|AAG22809.1|  483|Homo sapiens vacuolar ATPase subunit H
           protein.
          Length = 483

 Score = 74.9 bits (176), Expect = 2e-13
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = -3

Query: 591 LGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQ 457
           LGGKQ VM  + H+D  VRY ALLAVQKLMVHNWEYLGKQL+ EQ
Sbjct: 431 LGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSEQ 475


>AF132945-1|AAD27720.1|  483|Homo sapiens CGI-11 protein protein.
          Length = 483

 Score = 74.9 bits (176), Expect = 2e-13
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = -3

Query: 591 LGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQ 457
           LGGKQ VM  + H+D  VRY ALLAVQKLMVHNWEYLGKQL+ EQ
Sbjct: 431 LGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSEQ 475


>AF112204-1|AAF17192.1|  483|Homo sapiens Vacuolar proton pump
           subunit SFD alpha isoform protein.
          Length = 483

 Score = 74.9 bits (176), Expect = 2e-13
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = -3

Query: 591 LGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQ 457
           LGGKQ VM  + H+D  VRY ALLAVQKLMVHNWEYLGKQL+ EQ
Sbjct: 431 LGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSEQ 475


>AF125105-1|AAL75942.1|  476|Homo sapiens vacuolar proton pump
           subunit SFD alpha isoform protein.
          Length = 476

 Score = 56.4 bits (130), Expect = 7e-08
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = -3

Query: 591 LGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWEYLGKQLE 466
           LGGKQ VM  + H+D  VRY ALLAV +LMVHNWE L KQ++
Sbjct: 431 LGGKQLVMNHMLHEDQQVRYNALLAVMELMVHNWE-LAKQMQ 471


>AF294629-1|AAG23961.1|  410|Homo sapiens aristaless-like 4 protein.
          Length = 410

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +3

Query: 426 LQPQCQPVCRFVPSPVACRDIPSCEP 503
           L  QCQP C   P   AC  +PSC P
Sbjct: 314 LPHQCQPACPLRPG--ACLHVPSCPP 337


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,683,563
Number of Sequences: 237096
Number of extensions: 1505572
Number of successful extensions: 2406
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2406
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)