Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13c06
(729 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 39 0.004
03_03_0040 - 13999040-13999179,13999524-13999638,13999759-139998... 39 0.005
03_06_0498 - 34341441-34341575,34341808-34341945,34342019-343421... 38 0.006
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 36 0.025
09_04_0352 + 16908942-16909030,16909295-16909464,16909535-169096... 36 0.033
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 35 0.076
10_08_1053 - 22575281-22575409,22575516-22575653,22575786-225758... 34 0.10
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 34 0.13
11_04_0293 + 15926561-15928834 33 0.18
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 33 0.31
07_01_0044 - 348439-349539,351979-352301,352418-352550 33 0.31
08_01_0526 + 4575160-4576719 32 0.41
02_01_0455 + 3266123-3266258,3266348-3266670,3267083-3267661,326... 32 0.41
06_02_0169 - 12535102-12536062,12536949-12537646 31 0.71
05_07_0239 - 28599452-28599564,28599685-28599799,28600051-286001... 31 0.71
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 31 0.94
02_02_0155 + 7272563-7272630,7272934-7273031,7273491-7274057,727... 31 0.94
11_06_0421 + 23331702-23331723,23332161-23332197,23333397-233335... 31 1.2
07_03_0887 - 22299783-22300913,22301241-22301569,22301958-22302090 31 1.2
06_02_0166 + 12522172-12522890,12523567-12524596 31 1.2
02_02_0558 + 11477433-11477525,11477632-11477973,11481854-114823... 31 1.2
10_08_0925 + 21604871-21605021,21605562-21605881,21606899-216078... 30 1.6
10_06_0088 - 10538037-10539463,10539696-10539789 30 1.6
03_02_0179 - 6201393-6202365,6202470-6202610,6202728-6202767,620... 30 1.6
09_04_0444 - 17649685-17650524 30 2.2
03_05_0199 - 21893051-21893509,21893835-21894482,21894566-218948... 30 2.2
01_05_0389 + 21716056-21716191,21716275-21716597,21716889-217175... 30 2.2
06_01_0190 + 1475240-1475633,1475720-1476237 29 2.9
06_01_0119 - 924433-924915,925011-925154 29 2.9
01_06_0271 - 28055367-28055402,28055503-28055622,28055710-280558... 29 2.9
01_05_0390 - 21720118-21720573,21720667-21721296,21721427-217217... 29 2.9
09_04_0361 - 16948740-16948860,16948951-16949018,16949424-169495... 29 3.8
02_05_1340 + 35797923-35799881 29 3.8
02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,879... 29 3.8
03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,975... 28 6.6
03_02_0521 - 9093932-9094252 28 6.6
03_01_0204 + 1611837-1611840,1611926-1612048,1614570-1614659,161... 28 6.6
12_02_0509 - 19829360-19830400,19831475-19831821,19831920-19832073 28 8.7
09_02_0311 + 7164774-7166327 28 8.7
04_04_0974 + 29831274-29833184 28 8.7
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = -2
Query: 278 LFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
L+F +A +G+ A + FGGV LL+AL+ + ETK R ++EI
Sbjct: 468 LYFLELAKKLGVGAVYAGFGGVSLLSALFAYNFIVETKGRSLEEI 512
>03_03_0040 -
13999040-13999179,13999524-13999638,13999759-13999818,
14000007-14000060,14000274-14000333,14000418-14000480,
14000552-14000595,14000671-14000755,14000904-14001028,
14001368-14001432,14001460-14001518,14001678-14001743,
14001870-14001935,14002019-14002105,14002168-14002257,
14002378-14002440,14003153-14003419
Length = 502
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -2
Query: 233 FYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
F+ F L+T L+VV+VVPETK R ++EI
Sbjct: 459 FFMFSAASLITILFVVMVVPETKGRTLEEI 488
>03_06_0498 -
34341441-34341575,34341808-34341945,34342019-34342117,
34342320-34342400,34342548-34342610,34342717-34342764,
34343033-34343410,34345413-34345537,34345635-34345701,
34345797-34345856,34346495-34346621,34346670-34346986
Length = 545
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -2
Query: 272 FKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
F P+ +G F FG + LL+ ++V+L VPETK ++EI
Sbjct: 497 FSPLQEFLGPANIFLLFGAISLLSLVFVILKVPETKGLTLEEI 539
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 278 LFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
L+F V N G+ + F VC L +Y+ V ETK R ++EI
Sbjct: 456 LYFLSVVNKFGISTVYLGFASVCALAVVYIAGNVVETKGRSLEEI 500
>09_04_0352 +
16908942-16909030,16909295-16909464,16909535-16909608,
16909828-16909916,16910378-16910492,16910642-16910839
Length = 244
Score = 35.9 bits (79), Expect = 0.033
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = -2
Query: 278 LFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
L+F + +G+ A + FGGV L+AL+ + ETK R ++EI
Sbjct: 187 LYFLELVKKLGVGAVYAGFGGVSFLSALFAYNFIVETKGRSLEEI 231
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 34.7 bits (76), Expect = 0.076
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -2
Query: 233 FYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
F+ F VC + L++V +VPETK + ++EI
Sbjct: 365 FFLFALVCAVAILFIVKIVPETKGKTLEEI 394
>10_08_1053 -
22575281-22575409,22575516-22575653,22575786-22575884,
22576281-22576361,22577171-22577233,22577473-22577520,
22577622-22577990,22578082-22578183,22578290-22578414,
22578500-22578566,22578817-22578895,22578928-22579079,
22579182-22579223
Length = 497
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = -2
Query: 272 FKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
F P+ +++G F FG + + + +++ +VPETK ++EI
Sbjct: 451 FSPLEDLIGTGILFSAFGVIAVASLVFIFFIVPETKGLTLEEI 493
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 257 NVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
N +GL F + VC+L L+V + VPETK ++ I
Sbjct: 689 NAIGLAGVFGIYAVVCILAFLFVFMKVPETKGMPLEVI 726
>11_04_0293 + 15926561-15928834
Length = 757
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 251 VGLYAAFYFFGGVCLLTALYVVLVVPETK 165
VGL F F+ VC + ++V L VPETK
Sbjct: 703 VGLAGVFSFYAAVCCVALVFVALKVPETK 731
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -2
Query: 272 FKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
F + + +G F FGG+ + +V++ VPETK I+E+
Sbjct: 519 FLSLTDAIGAAWTFLIFGGLSVAALAFVLVCVPETKGLPIEEV 561
>07_01_0044 - 348439-349539,351979-352301,352418-352550
Length = 518
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 242 YAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
+ FYFF G ++ +++ L +PETK I+E+
Sbjct: 453 FGLFYFFAGWVVIMTVFIALFLPETKNVPIEEM 485
>08_01_0526 + 4575160-4576719
Length = 519
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 242 YAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
+ FYFF G L+ +V L +PETK I+E+
Sbjct: 452 FGLFYFFAGWMLVMTTFVALFLPETKGVPIEEM 484
>02_01_0455 +
3266123-3266258,3266348-3266670,3267083-3267661,
3267866-3268336
Length = 502
Score = 32.3 bits (70), Expect = 0.41
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 242 YAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
+ FYFFG LL +++ ++PETK ++E+
Sbjct: 436 FGLFYFFGAWVLLMTVFIATLLPETKCVPLEEV 468
>06_02_0169 - 12535102-12536062,12536949-12537646
Length = 552
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 251 VGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDE 147
+G+ A + GG+CLL + PET R ++E
Sbjct: 475 IGMMYALFVLGGICLLGLALTYVFTPETMMRSLEE 509
>05_07_0239 -
28599452-28599564,28599685-28599799,28600051-28600116,
28600270-28600329,28600571-28600617,28601118-28601202,
28601554-28601646,28601727-28601791,28601942-28602017,
28602110-28602175,28603082-28603141,28603400-28603489,
28603594-28603893
Length = 411
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 233 FYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
F + VC T ++V L VPETK R ++EI
Sbjct: 377 FAIYAAVCAGTLVFVCLWVPETKGRTLEEI 406
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 728 VRAGPRGSCVAGGARSSPASLPVLALCL 645
V AGP GS G SP+SLPV+ + L
Sbjct: 737 VGAGPDGSAKGAGGGGSPSSLPVVTIAL 764
>02_02_0155 +
7272563-7272630,7272934-7273031,7273491-7274057,
7275121-7276085,7276201-7276388,7276497-7276938
Length = 775
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 257 NVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
N +GL F + VC + ++V L VPETK ++ I
Sbjct: 722 NAIGLAGVFGIYAVVCSIAFVFVFLKVPETKGMPLEVI 759
>11_06_0421 +
23331702-23331723,23332161-23332197,23333397-23333533,
23333675-23334241,23335068-23335777,23335915-23336102,
23336489-23336918
Length = 696
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 287 LQMLFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETK 165
L + F + + +GL A + VC L ++V L VPETK
Sbjct: 637 LSIYCFPVMLSTIGLSGACAIYAFVCCLVLVFVYLRVPETK 677
>07_03_0887 - 22299783-22300913,22301241-22301569,22301958-22302090
Length = 530
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 242 YAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
+ F+FFG ++ L+V +PETK I+E+
Sbjct: 454 FILFFFFGAWVVIMTLFVAFFLPETKNVPIEEM 486
>06_02_0166 + 12522172-12522890,12523567-12524596
Length = 582
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 251 VGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDE 147
+G+ A + GG+CLL PET R ++E
Sbjct: 487 IGMMYALFVLGGICLLGLALTYAFTPETMTRSLEE 521
>02_02_0558 +
11477433-11477525,11477632-11477973,11481854-11482381,
11482459-11482956
Length = 486
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +1
Query: 436 RWLRSNSFFNPPRAGQSQQLSAADRLADGSGLPNNAT-LDTWAC*ALLNENISPVMTTET 612
RW+ + + + P +S++ +A ADG+ +P +DT + + LN + + V
Sbjct: 337 RWMAAQAQQHAPEPDKSRRRAALTAAADGTTMPERTVEMDTTSYRSPLNSHSAAVQ---- 392
Query: 613 GCSPAASQKMQRQSASTGSEAGELRAPPAT 702
G PA M +A+ + A APPAT
Sbjct: 393 GRPPAVPGYM---AATQAARARARTAPPAT 419
>10_08_0925 +
21604871-21605021,21605562-21605881,21606899-21607897,
21608085-21608126,21608190-21608249,21608915-21608959
Length = 538
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = -2
Query: 233 FYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
F+F G +CL+T ++V +PETKK ++++
Sbjct: 460 FFFAGWICLMT-VFVYFFLPETKKLPMEQM 488
>10_06_0088 - 10538037-10539463,10539696-10539789
Length = 506
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -2
Query: 272 FKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
F + + + AF+ F G+ + A + L+ PET+ + ++EI
Sbjct: 429 FVSLYKAITIGGAFFLFAGLAVAAATFFYLLCPETQGKPLEEI 471
>03_02_0179 -
6201393-6202365,6202470-6202610,6202728-6202767,
6204390-6204791,6205567-6205696
Length = 561
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2
Query: 242 YAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
YA F FF ++ +L+V+ +PETK I+E+
Sbjct: 494 YAIFAFFSAWVVVMSLFVLFFLPETKNIPIEEM 526
>09_04_0444 - 17649685-17650524
Length = 279
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 588 FPRDDDGDW-LQSCRVTEDAETEREHRQRGGG-APRPTGDTGT 710
F DDGD + V+ ET +H GGG AP+P G+ G+
Sbjct: 3 FDDHDDGDEEMPPMPVSSSYETPPQHGLAGGGMAPKPPGEIGS 45
>03_05_0199 -
21893051-21893509,21893835-21894482,21894566-21894888,
21895978-21896116
Length = 522
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 242 YAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
+ FYFF G L+ L+V +PETK I+++
Sbjct: 460 FGLFYFFSGWVLVMTLFVSAFLPETKGVPIEKM 492
>01_05_0389 +
21716056-21716191,21716275-21716597,21716889-21717518,
21717602-21718054
Length = 513
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 242 YAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
+ FYFFG + L+ +V +PETK I+E+
Sbjct: 453 FGLFYFFGAMELIMTGFVFFFLPETKGIPIEEM 485
>06_01_0190 + 1475240-1475633,1475720-1476237
Length = 303
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 370 LSER*CGAASLRCVGDACGCAVRWLRSNSFFNPPRAGQSQQLSAADRLADGSGL 531
+SER G S++ +G A G V + N +P R G Q +RLA G GL
Sbjct: 223 VSERGGGLPSVQAMGLAHGGGVVEVACN-LLDPARVGAEQVQGMVERLAAGEGL 275
>06_01_0119 - 924433-924915,925011-925154
Length = 208
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 370 LSER*CGAASLRCVGDACGCAVRWLRSNSFFNPPRAGQSQQLSAADRLADGSGL 531
+SER G S++ +G A G V + N +P R G Q +RLA G GL
Sbjct: 128 VSERGGGLPSVQAMGLAHGGGVVEVACN-LLDPARVGAEQVQGMVERLAAGEGL 180
>01_06_0271 -
28055367-28055402,28055503-28055622,28055710-28055892,
28056006-28056145,28056347-28056595,28056706-28056823,
28056924-28056999,28057096-28057162,28057282-28057369,
28057506-28057616,28058127-28058221,28058305-28058344,
28058736-28058812,28058978-28059026,28059464-28059520,
28059624-28059713,28059833-28059896,28060076-28060245
Length = 609
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 722 AGPRGSCVAGGARSSPASLPVLALCLCIF 636
AGP C GG +SP ++P L C IF
Sbjct: 28 AGPAYRCAYGGGAASPPAVPGLECCWDIF 56
>01_05_0390 -
21720118-21720573,21720667-21721296,21721427-21721749,
21721844-21721973
Length = 512
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -2
Query: 242 YAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
+ F+FFG + L+ +V++ +PETK I+E+
Sbjct: 451 FGLFFFFGAMELIMTGFVLVFLPETKGIPIEEM 483
>09_04_0361 -
16948740-16948860,16948951-16949018,16949424-16949510,
16949626-16949694,16949786-16949854,16949944-16950765
Length = 411
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +3
Query: 603 DGDWLQSCRVTEDAETEREHRQRGGGAPRPTGDTG 707
DG W C +T + EH + GGG + G
Sbjct: 39 DGGWRPFCMLTSSSRGHAEHHRNGGGGGEHRREAG 73
>02_05_1340 + 35797923-35799881
Length = 652
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 251 VGLYAAFYFFGGVCLLTALYVVLVVPETK 165
+GL F + VC + ++V L VPETK
Sbjct: 595 LGLAGLFAIYAAVCCVALVFVALRVPETK 623
>02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,
87962-88042,88133-88237,88338-88568,88665-90197,
90660-90752,91477-92887,93184-93305,93479-93718,
94521-94682,94770-94937,95025-95141,95266-95376,
95919-96506
Length = 1787
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 523 SGLPNNAT-LDTWAC*ALLNENISPVMTTETGCSPAASQKMQRQSASTGSEAGELRAPPA 699
SG+P A + A A + + S A+ + Q +S +T G+ A P
Sbjct: 879 SGIPGTAAGASSTAAPAPSGRRPTTRSKSSAASSGASKKDSQEESTNTAKGKGKAVAKPN 938
Query: 700 TQEPRGP 720
++EP+GP
Sbjct: 939 SEEPKGP 945
>03_02_0602 +
9759055-9759223,9759305-9759455,9759548-9759593,
9759974-9760033,9760519-9760555,9761268-9761347,
9761413-9761516,9761613-9761673,9762962-9763019,
9763866-9763918,9764357-9765320,9766131-9766185,
9767223-9768786
Length = 1133
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 592 PVMTTETGCSPAASQKMQRQSASTGSEAGELRAPPATQEPRGPART 729
P++ TET C+PA + SA + L P+ P G A T
Sbjct: 335 PIVFTETKCTPAPTWSRANDSAYRANVRALLGGLPSAAAPTGFAST 380
>03_02_0521 - 9093932-9094252
Length = 106
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = -2
Query: 518 SARRSAADSCCD*PARGGLKKLLLRSHLTAHPHASPTHRSDAAPHQRSESVIILDTQGMY 339
+ARRSAA P RG K L R + P +SP+ ++P + V+ILD G +
Sbjct: 2 AARRSAAARRL--PRRGREKSGLPRKTASTLP-SSPSLGPMSSPTRELPGVVILDNDGFH 58
Query: 338 RG 333
G
Sbjct: 59 SG 60
>03_01_0204 +
1611837-1611840,1611926-1612048,1614570-1614659,
1615529-1616095,1616235-1616959,1617065-1617252,
1617331-1617778
Length = 714
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 272 FKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETK 165
F + + +GL + VC+++ ++V++ VPETK
Sbjct: 654 FPVMLSSIGLIGVCGIYAVVCIVSFIFVLIKVPETK 689
>12_02_0509 - 19829360-19830400,19831475-19831821,19831920-19832073
Length = 513
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = -2
Query: 272 FKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
F + G+ FY F ++V +PETK R ++E+
Sbjct: 455 FISLYEAAGMAGTFYLFAACSAAAWVFVYACLPETKGRSLEEM 497
>09_02_0311 + 7164774-7166327
Length = 517
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 242 YAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 144
+ F+FF G +V L VPETK I+++
Sbjct: 453 FVLFFFFAGWVAAMTAFVALFVPETKGVPIEDM 485
>04_04_0974 + 29831274-29833184
Length = 636
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -2
Query: 539 LLGSPDPSARRSAADSCCD*PARGGLKKLLLRSHLTAHP 423
L S + S DSCCD GGL +H P
Sbjct: 121 LTASQEACQENSWIDSCCDFTGNGGLLDTFTTTHAACQP 159
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,815,574
Number of Sequences: 37544
Number of extensions: 340064
Number of successful extensions: 1437
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1437
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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