Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13b18
(671 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|c... 68 1e-12
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 40 2e-04
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 36 0.004
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 36 0.007
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 36 0.007
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 35 0.009
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 34 0.016
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 34 0.021
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 34 0.021
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 33 0.028
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 33 0.050
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 32 0.065
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 32 0.065
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 32 0.086
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 32 0.086
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 31 0.11
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 31 0.15
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 31 0.15
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 31 0.20
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 31 0.20
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 31 0.20
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 31 0.20
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 31 0.20
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 30 0.26
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 30 0.35
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 29 0.46
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 29 0.46
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 29 0.46
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 29 0.46
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 29 0.46
SPCC1020.09 |||WD repeat protein, human WDR79 family|Schizosacch... 29 0.61
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 29 0.61
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 29 0.61
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 29 0.61
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 29 0.81
SPBC32H8.09 |||WD repeat protein, human WDR8 family|Schizosaccha... 29 0.81
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 28 1.1
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 28 1.1
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 28 1.1
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 28 1.4
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 28 1.4
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 28 1.4
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 28 1.4
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 27 1.9
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 27 1.9
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 27 1.9
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 27 1.9
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 27 3.3
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 27 3.3
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 27 3.3
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 26 4.3
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 4.3
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 26 4.3
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 26 5.7
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 25 7.5
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 25 7.5
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 25 7.5
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 25 7.5
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 25 7.5
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 9.9
SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 25 9.9
SPAC12G12.10 |||WD repeat protein, human WDR21 family|Schizosacc... 25 9.9
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 25 9.9
>SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 67.7 bits (158), Expect = 1e-12
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -2
Query: 646 KSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNE 479
K E++ +D H VWR +N TGT+L+SSGDD CVRLW Y N +KC++V E
Sbjct: 278 KVELIGEYDNHKCQVWRCRFNVTGTILSSSGDDGCVRLWKASYANLFKCISVVSLE 333
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 40.3 bits (90), Expect = 2e-04
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = -2
Query: 643 SEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKN-ETVG 470
S MA F+ H S + +++ PTG+ L S D V++WN++ + + + VF + E +G
Sbjct: 179 SRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIG 237
Score = 36.3 bits (80), Expect = 0.004
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 643 SEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYL-NQWKCVAVFKNET 476
++V + H V + + G LA+ D+ VRLWN+ N +KC+ VF T
Sbjct: 354 TQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHT 410
Score = 35.9 bits (79), Expect = 0.005
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNET 476
EV+ H VW S+NP LAS D +R+WN ++ +CV + T
Sbjct: 498 EVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWN---VDTQQCVQTLEGHT 549
Score = 32.3 bits (70), Expect = 0.065
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
E +A D H VW ++ G+LL S G D+ V +W
Sbjct: 582 ECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 28.7 bits (61), Expect = 0.81
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -2
Query: 571 LLASSGDDSCVRLWNMQYLNQWKCVAVFKNET 476
+LAS DDS VRLW+ LN + +AVF+ +
Sbjct: 161 VLASGADDSRVRLWD---LNSSRSMAVFEGHS 189
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
H + V ++ +PT TLLA+ G + V++W++
Sbjct: 102 HETPVITMTIDPTNTLLATGGAEGLVKVWDI 132
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 36.3 bits (80), Expect = 0.004
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
H + V + +NP GTLL S D VR+WN+Q
Sbjct: 137 HTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQ 168
Score = 32.7 bits (71), Expect = 0.050
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNETVGGDSAP 455
HY + +V W LAS+ DD +R+W+ + +C+ N D P
Sbjct: 95 HYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNP 148
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 35.5 bits (78), Expect = 0.007
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -2
Query: 655 VRFKSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQ 509
+ +S ++A H V SW+P G +LA+ G D+ ++W+++ L +
Sbjct: 286 IDIRSNSVSAKLPHSDSVLTGSWHPNGNILATGGQDTTAKVWDIRALGK 334
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 35.5 bits (78), Expect = 0.007
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 652 RFKSEVMAAFDEHYSCVWRVSWNPTGTL-LASSGDDSCVRLWN 527
R +++A H CV V++NP AS+GDD+ VR+W+
Sbjct: 457 RESGKLLATLSGHVKCVNYVAYNPVDPYQFASAGDDNTVRIWS 499
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -2
Query: 625 FDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQ 509
F +H VW++S++ G LAS+ D ++++ L +
Sbjct: 209 FHDHSDEVWQISYSHNGRYLASASKDKTAIIFDVVNLKR 247
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 35.1 bits (77), Expect = 0.009
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 646 KSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
K E ++ H V V +NP G +LA++GD+ + LW
Sbjct: 56 KVEYLSTLSRHTQAVNVVRFNPEGNILATAGDEGTIMLW 94
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 34.3 bits (75), Expect = 0.016
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -2
Query: 622 DEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
DEH + ++W+P G LA+S D V++W+++
Sbjct: 346 DEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLR 379
Score = 29.9 bits (64), Expect = 0.35
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -2
Query: 646 KSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
+S + + H + V RV+++P+G L S+ D+ RLW++
Sbjct: 254 QSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDV 294
Score = 29.5 bits (63), Expect = 0.46
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
H ++ ++ P G+L++S G+D+ R+W+++
Sbjct: 306 HSEGIFSIACQPDGSLVSSGGNDAIGRIWDLR 337
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGT--LLASSGDDSCVRLWN 527
H S V V + +G +A+SG D CV+LWN
Sbjct: 390 HSSLVSDVRYIESGVNRFIATSGYDGCVKLWN 421
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 33.9 bits (74), Expect = 0.021
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNET 476
E AA + H + V ++W+ G LA+ D V +W +++ C+AV + T
Sbjct: 369 ECTAALEGHENEVKCIAWSCNGNYLATCSRDKSVWIWEATEDDEFDCLAVLQEHT 423
Score = 31.5 bits (68), Expect = 0.11
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
H + VW ++++P G LAS+ +D V LW
Sbjct: 466 HTNTVWALAFSPNGNTLASADNDGNVFLW 494
Score = 30.3 bits (65), Expect = 0.26
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
+ +A EH V V+W+PT LL S D+ + W
Sbjct: 414 DCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFW 450
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 33.9 bits (74), Expect = 0.021
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
H V+ V W+P G +AS G D VR+W+
Sbjct: 472 HEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 30.7 bits (66), Expect = 0.20
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = -2
Query: 634 MAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
+A H + V++ +W+ LL SS D+ +++W+++
Sbjct: 424 LATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVR 461
Score = 28.7 bits (61), Expect = 0.81
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
H V S++P G +A++ DS VRLW+
Sbjct: 388 HQKVVNHASFSPDGRCIATASFDSSVRLWD 417
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -2
Query: 634 MAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
+A H + V V+W P +++A+ D+ +R W+
Sbjct: 170 IATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWD 205
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 33.5 bits (73), Expect = 0.028
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
HY V ++W LAS G D +R+WNM+
Sbjct: 245 HYGTVNGLAWTSDARYLASCGTDDRIRVWNME 276
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 32.7 bits (71), Expect = 0.050
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
E + ++ H +W N + TL+ S D+ +RLW+++
Sbjct: 43 ERLGTYEGHTGAIWTCDINKSSTLMVSGAADNTMRLWDVK 82
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 32.3 bits (70), Expect = 0.065
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 655 VRFKSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
+RF H V V+++P G LAS G D +R+W+
Sbjct: 207 IRFPKLPFLKLAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWD 249
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 32.3 bits (70), Expect = 0.065
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 655 VRFKSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
VR + + H S V ++W G LAS G+D+ V++W+
Sbjct: 290 VRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWD 332
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 31.9 bits (69), Expect = 0.086
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 625 FDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
FD H V ++++PT L S GDD V +WN
Sbjct: 49 FDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWN 81
Score = 31.5 bits (68), Expect = 0.11
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 592 SWNPTGTLLASSGDDSCVRLWNMQYLNQWK 503
+++PT L+ S+GDD V+LW M W+
Sbjct: 219 AFHPTLPLILSAGDDRLVKLWRMTASKAWE 248
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 568 LASSGDDSCVRLWNMQYLNQWKCVAV 491
+ S DD +R+WN Q N C+A+
Sbjct: 110 ILSCSDDQTIRIWNWQSRN---CIAI 132
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 31.9 bits (69), Expect = 0.086
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
E + AF+ VW +SW+P G LA+ +D + +W++
Sbjct: 138 EFITAFETVDEIVW-LSWHPKGLFLAAGCNDGSIWMWSL 175
Score = 30.3 bits (65), Expect = 0.26
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
H + + W+ GT +A+ G DS VRLW
Sbjct: 103 HKDSIVAIDWSFDGTYIATGGMDSQVRLW 131
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNET 476
E + F+ H + + +PT L +S DD ++ +N WKCV F+ +
Sbjct: 89 EKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNWDM--SWKCVQTFEGHS 141
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.1 bits (67), Expect = 0.15
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -2
Query: 601 WRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKN 482
WRVSW+ +G +LA S D+ V L+ + N+W+ + N
Sbjct: 259 WRVSWSLSGNILAVSCGDNKVYLFK-ESQNKWQLLNELSN 297
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 31.1 bits (67), Expect = 0.15
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -2
Query: 658 GVRFKSEVMAAFDEHY--SCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCV 497
G R K VM D H + +S++ G L S G+D+ +R+W+++ N KCV
Sbjct: 281 GSRTKRPVMKIKDAHLPQQGISCLSFSQDGNYLLSRGEDNALRVWDLR--NSNKCV 334
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 30.7 bits (66), Expect = 0.20
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQY 518
H + +W V ++P G A++ D RLW++++
Sbjct: 444 HNAPIWDVQFSPFGYYFATASHDQTARLWDVEH 476
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = -2
Query: 625 FDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQ 509
F+ H+S V + + G LAS+ + +++W+++ NQ
Sbjct: 525 FNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQ 563
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 30.7 bits (66), Expect = 0.20
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 625 FDEHYSCVWRVSWNPT-GTLLASSGDDSCVRLWNM 524
F H + V WNP +LAS GDDS + +W +
Sbjct: 77 FRGHTAAVLDTDWNPFHDQVLASGGDDSKIMIWKV 111
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 634 MAAFDEHYSCVWRVSWNPTGT-LLASSGDDSCVRLWNMQ 521
+A H V V ++PT +LASS D+ ++LW+ +
Sbjct: 127 IAELKGHSRKVGLVQYHPTAANVLASSSADNTIKLWDCE 165
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 30.7 bits (66), Expect = 0.20
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -2
Query: 568 LASSGDDSCVRLWNMQYLNQWKCVAVFKNETVGGDSAPAARAHTAYTRLAAMANPAHM 395
L++ G D+C LWN Q WK +V + V A A A AY R ++P+H+
Sbjct: 39 LSADGSDNCFELWNNQ-SELWK--SVLTDSNVAAQEAGTA-AFVAYCR---FSDPSHL 89
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 30.7 bits (66), Expect = 0.20
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -2
Query: 634 MAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYL 515
+ A+ H VW V++ P G A++ D +LW+ ++
Sbjct: 414 LVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHI 453
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
H ++ +S++ T+L S G D VR W++
Sbjct: 546 HRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 30.7 bits (66), Expect = 0.20
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -2
Query: 649 FKSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN-MQYLNQWKC 500
F + F H V +S + +G LAS GDD +R+W M WKC
Sbjct: 367 FPTRCTNVFIGHKGRVRCLSVHVSGNWLASGGDDGVLRIWEVMTGRCVWKC 417
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 30.3 bits (65), Expect = 0.26
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = -2
Query: 643 SEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
++V+ + H S V+ + +PT +L ++G D+ R+W+M+
Sbjct: 237 NKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMR 277
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 29.9 bits (64), Expect = 0.35
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
H V+ V+++P G L S D+ ++LW +Q
Sbjct: 457 HEESVYSVAFSPDGKYLVSGSLDNTIKLWELQ 488
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 29.5 bits (63), Expect = 0.46
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
H V+ V+ NP+ S+G D+ +R+WN++
Sbjct: 616 HVGRVYSVTINPSRQQCISAGTDAKIRIWNLE 647
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 29.5 bits (63), Expect = 0.46
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -2
Query: 646 KSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
K V+ F +++ + V+W+P G +A G D V +++
Sbjct: 353 KEHVLDVFHSYFAGLTCVTWSPDGKFIAIGGKDDLVSIYS 392
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 29.5 bits (63), Expect = 0.46
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
H V +S+N +G+LLAS D VR+W++
Sbjct: 466 HEGPVSSLSFNSSGSLLASGSWDKTVRIWDI 496
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNET 476
HY + + ++ G + + DD +++W+M N C+ F T
Sbjct: 338 HYDALSTLQYSSDGQRIITGADDGKIKVWDM---NSGFCIVTFTQHT 381
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 29.5 bits (63), Expect = 0.46
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 643 SEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
S+ + + H + + ++ GT+LA+ D CVRLW+
Sbjct: 264 SKTITSLTGHENRISSLALTSDGTMLATGSWDECVRLWS 302
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 29.5 bits (63), Expect = 0.46
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 589 WNPTGTLLASSGDDSCVRLWNMQYLN 512
W P G L + G D V++W+++ N
Sbjct: 554 WQPKGNLFVTGGSDGIVKVWDLRLNN 579
>SPCC1020.09 |||WD repeat protein, human WDR79
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 399
Score = 29.1 bits (62), Expect = 0.61
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 589 WNPTGTLLASSGDDSCVRLWNMQY 518
W+P G+ + S +D C+ WN+ +
Sbjct: 54 WSPDGSTILSLTEDQCLNCWNVPF 77
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 29.1 bits (62), Expect = 0.61
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 655 VRFKSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
VR H V + WN LLAS G+D+ + +W+
Sbjct: 360 VRAPEHYFRVLTAHRQEVCGLEWNSNENLLASGGNDNALMVWD 402
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.1 bits (62), Expect = 0.61
Identities = 13/49 (26%), Positives = 31/49 (63%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNETVG 470
H + ++ V++NP G LL S+ + +++W+ ++ +C++ ++ET G
Sbjct: 228 HAAWIFAVAFNPVGDLLLSADVEGKIKIWD---IDTMECIST-QSETDG 272
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
H S V V+++P TLLA++GD + ++++
Sbjct: 186 HTSPVRSVAFSPGSTLLAAAGDSKMITIYDV 216
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 29.1 bits (62), Expect = 0.61
Identities = 11/41 (26%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 625 FDE--HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQ 509
FD+ H ++ + +P G+ +A+ G D +R+W+ + +N+
Sbjct: 12 FDDRGHRLSIFSIHIHPDGSRIATGGLDGTIRIWSTEAINR 52
Score = 28.7 bits (61), Expect = 0.81
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 634 MAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
+ H V V ++P G LAS DD V +W+ +
Sbjct: 67 LCCMSTHTGTVTSVRFSPNGQYLASGSDDRVVIIWHKE 104
Score = 28.3 bits (60), Expect = 1.1
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
E + + H S V ++++P G A+ DD +++W +
Sbjct: 167 ERLKRIEAHQSHVKGITFDPAGKYFATESDDRTIKVWRV 205
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 28.7 bits (61), Expect = 0.81
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWK 503
H CV + W+ G L S DD+ + +W++ N++K
Sbjct: 44 HTGCVNTLDWSADGEFLLSGSDDTRLIVWDV--FNEYK 79
>SPBC32H8.09 |||WD repeat protein, human WDR8
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 28.7 bits (61), Expect = 0.81
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 595 VSWNPTGTLLASSGDDSCVRLWNM 524
+SW+P+G LL S DS + +W++
Sbjct: 106 ISWSPSGELLLWSSFDSKITVWSL 129
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 28.3 bits (60), Expect = 1.1
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -2
Query: 595 VSWNPTGTLLASSGDDSCVRLWNMQ 521
V +N TG + ++G++ VRLWN++
Sbjct: 20 VKYNRTGKYVLAAGNERVVRLWNVK 44
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
H + + + +N ++LAS DS VRLW+
Sbjct: 97 HLAQINTIRYNEDSSILASGSFDSKVRLWD 126
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/49 (22%), Positives = 26/49 (53%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVA 494
+++ + H++ V ++++P G LAS D +++W + K +A
Sbjct: 175 KLIKVIEGHHTFVGGLAFDPMGQFLASQSFDHTLKVWKLSTFGVEKSIA 223
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
H V V W+ G L AS DD VR+WN
Sbjct: 436 HTKDVTAVDWSSEGQL-ASISDDGSVRVWN 464
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 27.9 bits (59), Expect = 1.4
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = -2
Query: 643 SEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
S ++ H +W ++ GT A++ D V+LW+++
Sbjct: 467 SSLIERIQAHDGAIWDLAVGHDGTYFATASADHTVKLWSLK 507
Score = 25.8 bits (54), Expect = 5.7
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
E++ + H S V + ++ GT LAS D+ + +W++
Sbjct: 95 ELLITLNGHKSAVTTMDFDKMGTRLASGSMDTDIIVWDI 133
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -2
Query: 661 LGVRFKSEVMAAFDEHYSCVWRVSWNP-TGTLLASSGDDSCVRLWNM 524
+ +R A H V V W P + + LA+ GDD V LW++
Sbjct: 299 IDIRVPGTAYATLRGHKGDVNAVKWMPGSKSKLATCGDDCVVSLWDL 345
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
H V V W+PT ++ SS DS + +W
Sbjct: 267 HEDWVMSVDWHPTKEMILSSSADSSMIVW 295
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
H V V+W+P G S+G D RL+
Sbjct: 369 HTKSVKGVAWDPEGKFYLSAGTDQTTRLF 397
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -2
Query: 601 WRVSWNPTGTLLASSGDDSCVRLWNMQYLNQW 506
W WNP G + G RLW Q QW
Sbjct: 330 WGGLWNPNGNCVVCWGRTGGWRLWK-QDAGQW 360
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 27.9 bits (59), Expect = 1.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 595 VSWNPTGTLLASSGDDSCVRLWN 527
V W+P+ LLAS D+ V+ W+
Sbjct: 212 VDWHPSKGLLASGSKDNLVKFWD 234
Score = 27.9 bits (59), Expect = 1.4
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -2
Query: 604 VWRVSWNPTGTLLASSGDDSCVRLWN 527
+W + ++P G LL + +D R W+
Sbjct: 363 IWSMQYHPLGHLLCTGSNDKTTRFWS 388
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWK 503
H V + WN GT AS G+D+ V ++++ L K
Sbjct: 288 HQEQVCGLEWNYDGTQFASGGNDNLVCIFDIDSLENKK 325
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 27.5 bits (58), Expect = 1.9
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
+++ A+D H + +++ G ++ DDS +R W
Sbjct: 387 DIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFW 423
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
H V V+ +P G+L AS G D + LW++
Sbjct: 191 HTGYVSAVTISPDGSLCASGGRDGTLMLWDL 221
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 610 SCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
SCV R S NP S+G D V++W+++
Sbjct: 152 SCV-RFSPNPDNLTFVSAGWDKAVKVWDLE 180
Score = 25.8 bits (54), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 595 VSWNPTGTLLASSGDDSCVRLWNM 524
++W+P G L S D+ +R+W +
Sbjct: 289 LTWSPDGQTLFSGWTDNLIRVWQV 312
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 595 VSWNPTGTLLASSGDDSCVRLWNMQYLN 512
+ WN +G+ LASS V +WN L+
Sbjct: 30 LGWNLSGSRLASSSSSGSVLVWNSDRLD 57
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 26.6 bits (56), Expect = 3.3
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 604 VWRVSWNPTGTLLASSGDDSCVRLWNM 524
VW + +G LA++G D+ +R+W +
Sbjct: 189 VWASEISKSGKYLATAGKDAIIRVWKV 215
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 628 AFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
A EH V V+W+ GT +AS D +++++Q
Sbjct: 69 ALYEHQGPVLSVNWSRDGTKVASGSVDKSAKVFDIQ 104
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGT-LLASSGDDSCVRLWNMQYLNQ 509
H + V++NP +LA+ D + LW+++ LNQ
Sbjct: 280 HSGPIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQ 316
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = -2
Query: 649 FKSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLN 512
F+ E + + H + +++N +GTLL S D +++W++ L+
Sbjct: 90 FRQETLV-LEGHEHNIPCITFNSSGTLLLSGSIDRSLQIWDITSLS 134
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 616 HYSCVWRVSWNPTG-TLLASSGDDSCVRLWNMQ 521
H +SW P T L SSG D +WN++
Sbjct: 259 HQKAALSLSWCPEDPTFLLSSGKDGRAMVWNVE 291
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
H S V+ +++ L+AS G+D +R+W
Sbjct: 214 HTSFVYSLTYIHNQQLIASCGEDRTIRIW 242
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 25.8 bits (54), Expect = 5.7
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = -2
Query: 604 VWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAV 491
+W + + ++ + G+D VR W+ + Q C++V
Sbjct: 284 IWSLVVSSANPIIYTGGNDGSVRSWDYKTRIQESCISV 321
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 25.4 bits (53), Expect = 7.5
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = -2
Query: 610 SCVWRVSWNPTGTLLASSGDDSCVRLW 530
+ +W + ++ G LA G D +R+W
Sbjct: 239 NAIWAMKFSRDGRYLAVGGQDRILRIW 265
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 25.4 bits (53), Expect = 7.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
H + V ++P+G+ AS G D + LWN+
Sbjct: 49 HTAEVLVARFDPSGSYFASGGMDRQILLWNV 79
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -2
Query: 643 SEVMAAFDEHYSCVWRVSWNP-TGTLLASSGD--DSCVRLWN 527
S + F+EH + V + W+P +LAS G D C+ + N
Sbjct: 281 SRPLHKFEEHTAAVKAIGWSPHQRGILASGGGTIDRCLTIHN 322
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 25.4 bits (53), Expect = 7.5
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
H VW +++ T L ++ D RLW +
Sbjct: 258 HQRWVWDCAFSADSTYLVTASSDHVARLWEL 288
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 25.4 bits (53), Expect = 7.5
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -2
Query: 619 EHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
E++S V +SW+ G +A+S + +W+ Q
Sbjct: 228 ENHSGVTDISWSSNGMYIAASFKKGGILIWDTQ 260
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/42 (21%), Positives = 21/42 (50%)
Frame = +1
Query: 109 RQRPPAVVVSVVRLMTSLQKCSKERDYNRVSF*YTTSRNCFK 234
+Q P ++ ++ +L T K ++ DY V+ + C++
Sbjct: 1055 QQIPEPILPNLQKLSTQYSKIVRDNDYGNVNCWFNRDTECYR 1096
>SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 466
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -3
Query: 624 STSTTRACGGCRGTPPGLCWPRRGTTAASDYGI 526
+ + + CGG GT G+ W T +YG+
Sbjct: 334 AAAAKQCCGGYSGTSCGIYWFWNNGTWDDNYGV 366
>SPAC12G12.10 |||WD repeat protein, human WDR21
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 420
Score = 25.0 bits (52), Expect = 9.9
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 586 NPTGTLLASSGDDSCVRLW 530
N G++ +S+GDD +R W
Sbjct: 355 NENGSIFSSAGDDYVLRFW 373
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -2
Query: 646 KSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
K E ++EH + ++P+G +AS + VR+W+
Sbjct: 47 KQENCFQYNEHTAPTTVARFSPSGYYVASGDNQGNVRIWD 86
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,284,389
Number of Sequences: 5004
Number of extensions: 40587
Number of successful extensions: 228
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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