Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13b18
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical ... 38 0.006
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 37 0.011
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 37 0.011
AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical ... 37 0.011
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 37 0.011
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 36 0.026
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 36 0.026
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 34 0.080
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 34 0.080
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 34 0.080
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 34 0.080
AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical ... 34 0.080
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 34 0.080
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 34 0.11
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 34 0.11
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 34 0.11
AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore... 33 0.14
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 33 0.14
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 33 0.24
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 33 0.24
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 32 0.32
AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein... 32 0.32
AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal chem... 32 0.32
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 32 0.43
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 32 0.43
Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical p... 31 0.56
Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 31 0.56
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 31 0.56
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 31 0.56
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 31 0.75
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 31 0.75
Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical pr... 31 0.99
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 30 1.3
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 30 1.3
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 30 1.3
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 30 1.3
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 30 1.3
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z72502-4|CAA96589.1| 750|Caenorhabditis elegans Hypothetical pr... 29 3.0
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 29 3.0
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 29 3.0
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 29 4.0
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 29 4.0
Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical pr... 28 5.3
AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical ... 28 5.3
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 28 5.3
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 28 6.9
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 9.2
U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical pr... 27 9.2
>AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical
protein Y73E7A.9 protein.
Length = 558
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
H CV + WN TG LLAS DD V++W
Sbjct: 40 HSGCVNTLRWNKTGALLASGSDDRNVKIW 68
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAV 491
H V+ ++W+P GT +AS+ D +++WN+ L K + V
Sbjct: 238 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPV 279
Score = 34.3 bits (75), Expect = 0.080
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 631 AAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
+ F EH V V +NP G+L AS+G D + L+N
Sbjct: 184 STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAV 491
H V+ ++W+P GT +AS+ D +++WN+ L K + V
Sbjct: 238 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPV 279
Score = 34.3 bits (75), Expect = 0.080
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 631 AAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
+ F EH V V +NP G+L AS+G D + L+N
Sbjct: 184 STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
H + V VSW+P LA+ D+ V +WNM
Sbjct: 535 HTAKVACVSWSPDNVRLATGSLDNSVIVWNM 565
>AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical
protein Y18D10A.9 protein.
Length = 337
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2
Query: 610 SCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
S VW W+ G +LAS GDD VR+W++
Sbjct: 18 SRVWMTCWHHGGRILASCGDDKAVRVWSL 46
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPT---GTLLASSGDDSCVRLWNMQ 521
E + H V V+WNP LL S+ DD +RLW ++
Sbjct: 294 EHLGVVGRHELDVNHVAWNPNPKFSNLLTSASDDGTIRLWELE 336
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 637 VMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
V + H V +V+W+PT LL S DS +R +
Sbjct: 148 VSSILQPHTQDVKQVAWHPTEDLLVSCSYDSSIRFY 183
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
H VW ++++ G L + G+D C++L+
Sbjct: 200 HVGTVWSIAFDTEGHRLVTVGEDHCIQLF 228
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAV 491
H V+ ++W+P GT +AS+ D +++WN+ L K + V
Sbjct: 238 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPV 279
Score = 34.3 bits (75), Expect = 0.080
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 631 AAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
+ F EH V V +NP G+L AS+G D + L+N
Sbjct: 184 STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
H + V VSW+P LA+ D+ V +WNM
Sbjct: 535 HTAKVACVSWSPDNVRLATGSLDNSVIVWNM 565
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 35.9 bits (79), Expect = 0.026
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRL 533
E A F H+ + ++W+P+GT++A+ G+D +R+
Sbjct: 278 EEFARFKGHFGPINTMAWHPSGTIIATGGEDGYIRI 313
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -2
Query: 640 EVMAAFDEHYSCVW--RVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNET 476
E + ++D H VW VSW+ T + AS D V++W+ + N C+ ++T
Sbjct: 43 ERIGSYDGHNGAVWDIDVSWDTTKCVTASG--DLTVKIWDAELGN---CLYTINHQT 94
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFK 485
H S V +SWN L+ S GDD +++W+++ + + VA+FK
Sbjct: 321 HESDVNVISWNRHENLIVSGGDDGELKIWSLKTIQFGQPVALFK 364
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGT-LLASSGDDSCVRLWNMQYLNQWKCV 497
H V ++W+PT T LLAS D ++LW+ + + CV
Sbjct: 274 HKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACV 314
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 34.3 bits (75), Expect = 0.080
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 634 MAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQY 518
M H V+ V+W+ G L AS G D V LWN ++
Sbjct: 53 MQTLKGHKDLVYTVAWSHNGELFASGGADKLVILWNEKH 91
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 34.3 bits (75), Expect = 0.080
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -2
Query: 628 AFDEHYSCVWRVSWNPTG-TLLASSGDDSCVRLWNMQYLNQ 509
+F+ H +++V W+P T+LASSG D + +W++ + +
Sbjct: 304 SFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGE 344
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 34.3 bits (75), Expect = 0.080
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 634 MAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQY 518
M H V+ V+W+ G L AS G D V LWN ++
Sbjct: 53 MQTLKGHKDLVYTVAWSHNGELFASGGADKLVILWNEKH 91
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 34.3 bits (75), Expect = 0.080
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -2
Query: 628 AFDEHYSCVWRVSWNPTG-TLLASSGDDSCVRLWNMQYLNQ 509
+F+ H +++V W+P T+LASSG D + +W++ + +
Sbjct: 304 SFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGE 344
>AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical
protein Y43F4B.4 protein.
Length = 363
Score = 34.3 bits (75), Expect = 0.080
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -2
Query: 601 WRVSWNPTGTLLASSGDDSCVRLWNMQYLNQW 506
WR+ +N G++++S+ D +R W ++NQW
Sbjct: 293 WRLRYNLMGSVISSTSLDGTLRSWKSLFVNQW 324
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 34.3 bits (75), Expect = 0.080
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -2
Query: 628 AFDEHYSCVWRVSWNPTG-TLLASSGDDSCVRLWNMQYLNQ 509
+F+ H +++V W+P T+LASSG D + +W++ + +
Sbjct: 304 SFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGE 344
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 622 DEHYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
+EH +W + ++ G L+A++G DS +R+W
Sbjct: 614 NEHTGAIWCIKFSICGKLMATAGQDSILRVW 644
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 637 VMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVA 494
V AAF H + V ++++ G LA+ +D V+LW+++ L K A
Sbjct: 372 VAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKLKNLKTFA 419
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 622 DEHYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
+EH +W + ++ G L+A++G DS +R+W
Sbjct: 614 NEHTGAIWCIKFSICGKLMATAGQDSILRVW 644
>AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform b protein.
Length = 211
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -2
Query: 646 KSEVMAAFDEHYSCVWRVSW-NPT-GTLLASSGDDSCVRLWNMQYLNQWK 503
+S MA H VW+VSW +P G LLAS+ D V +WN Q +W+
Sbjct: 47 QSYPMAELVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIWNEQQ-GRWQ 95
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -2
Query: 646 KSEVMAAFDEHYSCVWRVSW-NPT-GTLLASSGDDSCVRLWNMQYLNQWK 503
+S MA H VW+VSW +P G LLAS+ D V +WN Q +W+
Sbjct: 47 QSYPMAELVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIWNEQQ-GRWQ 95
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -2
Query: 604 VWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNETVGGDSAPAA 449
++ S++P G+ L+ +GDD+ + +W QW V E G A A
Sbjct: 257 LYHSSFSPCGSFLSVAGDDNVITIWRENLQGQWIKVPRDNKEREGMSQAVGA 308
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCV 497
H + V+ S+NP +L+AS+G D VR+W+ + KC+
Sbjct: 296 HTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCVKCI 335
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
H + +S+N G +A+S D C+R+W+
Sbjct: 338 HSDPITSISYNHDGNTMATSSYDGCIRVWD 367
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = -2
Query: 646 KSEVMAAFDEHYSCVWRVSWNPT--GTLLASSGD-DSCVRLWNMQYLNQWKCV 497
++E + + +H + V ++W+P G L++ G D C+R WN +CV
Sbjct: 553 RNEPIQTYTQHNAAVKALAWSPHHHGLLVSGGGTADRCLRFWNTLTAQPMQCV 605
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
H V + W+P LLAS G+D+ + +WN++
Sbjct: 521 HRQEVCGLKWSPDKQLLASGGNDNQLLVWNLR 552
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
HY+ V V ++P L+ S+ +D +R+W+MQ
Sbjct: 250 HYNNVSSVIFHPNADLILSNSEDKSIRVWDMQ 281
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -2
Query: 637 VMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCV 497
++ FDEH V + ++ + S GDD +++WN + Q +C+
Sbjct: 45 LLEKFDEHDGPVRGICFHHDQPIFVSGGDDYKIKVWNYK---QKRCI 88
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 32.3 bits (70), Expect = 0.32
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
H +W + W+P G +LA+ +D+ + W
Sbjct: 388 HDQAIWSMKWHPLGHILATGSNDNNTKFW 416
>AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein
protein.
Length = 760
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 622 DEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
D H WN GT L SSG+D V++W+
Sbjct: 101 DAHNGAALCARWNSDGTGLLSSGEDGFVKMWS 132
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
H + WNPT L+ + G+D ++W+
Sbjct: 185 HDGIILCCDWNPTSDLIVTGGEDLKFKVWD 214
>AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal
chemotaxis protein 2 protein.
Length = 760
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 622 DEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
D H WN GT L SSG+D V++W+
Sbjct: 101 DAHNGAALCARWNSDGTGLLSSGEDGFVKMWS 132
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
H + WNPT L+ + G+D ++W+
Sbjct: 185 HDGIILCCDWNPTSDLIVTGGEDLKFKVWD 214
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 31.9 bits (69), Expect = 0.43
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYL 515
++M + H + ++P G L +S D V++WNM ++
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHM 119
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
H V+ V W+P GT + S G D ++LW
Sbjct: 443 HGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
>Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical
protein F02E9.10c protein.
Length = 455
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = -2
Query: 655 VRFKSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
+ + +M+ +EH S + +S++PT L S GDD+ + ++ +
Sbjct: 283 IEMTTPIMSITNEHTSTISALSFSPTSRHLLSGGDDAMILIYRI 326
>Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical
protein F02E9.10b protein.
Length = 387
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = -2
Query: 655 VRFKSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
+ + +M+ +EH S + +S++PT L S GDD+ + ++ +
Sbjct: 219 IEMTTPIMSITNEHTSTISALSFSPTSRHLLSGGDDAMILIYRI 262
>Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical
protein F02E9.10a protein.
Length = 451
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = -2
Query: 655 VRFKSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
+ + +M+ +EH S + +S++PT L S GDD+ + ++ +
Sbjct: 283 IEMTTPIMSITNEHTSTISALSFSPTSRHLLSGGDDAMILIYRI 326
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
H + V+ +NP+GTL+AS D +R+W
Sbjct: 189 HTNYVFCCCFNPSGTLIASGSFDETIRIW 217
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -2
Query: 637 VMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWK 503
V DE + + V ++P G + +S ++ ++LW+ Q L K
Sbjct: 267 VKTLIDEEHPPITHVKFSPNGKYILASNLNNTLKLWDYQKLRVLK 311
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 31.5 bits (68), Expect = 0.56
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Frame = -2
Query: 643 SEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNETV--- 473
++V+ + H S V +S +P+ +L + DS R+W+M+ Q C A N
Sbjct: 258 NKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVV 317
Query: 472 --GGDSAPAARAHTAYTRLAAMANPAHMPVH*RDKRSITA 359
D +H A RL +A M K+S+ A
Sbjct: 318 CQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRA 357
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQY 518
H S V V +P L S G+D V+ W+++Y
Sbjct: 225 HISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEY 257
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 31.5 bits (68), Expect = 0.56
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Frame = -2
Query: 643 SEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNETV--- 473
++V+ + H S V +S +P+ +L + DS R+W+M+ Q C A N
Sbjct: 258 NKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVV 317
Query: 472 --GGDSAPAARAHTAYTRLAAMANPAHMPVH*RDKRSITA 359
D +H A RL +A M K+S+ A
Sbjct: 318 CQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRA 357
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQY 518
H S V V +P L S G+D V+ W+++Y
Sbjct: 225 HISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEY 257
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 31.5 bits (68), Expect = 0.56
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
H +W V+++ + + L S+ DS VRLW
Sbjct: 465 HTDAIWSVAYHSSNSRLVSASSDSTVRLW 493
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
H V ++ +P G L S D +R+WNM+
Sbjct: 599 HVEGVSSLAIDPNGLYLLSGSHDGSIRMWNME 630
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 31.5 bits (68), Expect = 0.56
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
H +W V+++ + + L S+ DS VRLW
Sbjct: 465 HTDAIWSVAYHSSNSRLVSASSDSTVRLW 493
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
H V ++ +P G L S D +R+WNM+
Sbjct: 599 HVEGVSSLAIDPNGLYLLSGSHDGSIRMWNME 630
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 643 SEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
S + H V+ V+++P LL SS D VRLW+M+
Sbjct: 384 STTSVRYTGHGGPVFSVNFSPDRRLLISSAGDRTVRLWSME 424
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 643 SEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
S + H V+ V+++P LL SS D VRLW+M+
Sbjct: 384 STTSVRYTGHGGPVFSVNFSPDRRLLISSAGDRTVRLWSME 424
>Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical
protein R11D1.1b protein.
Length = 622
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 619 EHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYL 515
EH C+ + ++ LAS GDD R+WN+ L
Sbjct: 64 EHTGCINALQFSHNDRFLASGGDDMHGRVWNVDEL 98
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 625 FDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
FD H V +N G+L AS+G D V L+N
Sbjct: 186 FDHHKKFVQSTRYNNDGSLFASTGSDGTVVLYN 218
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
H S V V+W+P LA+ D+ V +W+M+
Sbjct: 524 HTSKVLTVAWSPDNQRLATGSIDTSVIIWDMK 555
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -2
Query: 634 MAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
+A F H V VS+N T + SS DD+ V++W+++
Sbjct: 358 VAVFQGHQDSVTSVSFN-TDYRIVSSSDDATVKIWDLR 394
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -2
Query: 646 KSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNET 476
K + + H VW V+ + T + AS+ D R+W+ L C+A + T
Sbjct: 129 KFRLSRLLEGHKDGVWHVAADSTRNICASASADQTARIWS---LESGACLATYTGHT 182
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -2
Query: 634 MAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
+A F H V VS+N T + SS DD+ V++W+++
Sbjct: 356 VAVFQGHQDSVTSVSFN-TDYRIVSSSDDATVKIWDLR 392
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -2
Query: 646 KSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNET 476
K + + H VW V+ + T + AS+ D R+W+ L C+A + T
Sbjct: 127 KFRLSRLLEGHKDGVWHVAADSTRNICASASADQTARIWS---LESGACLATYTGHT 180
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 619 EHYSCVWRVSWNPTGTLLASSGDDSCVRL 533
+H V+ +S+NP G LLA+ +D +RL
Sbjct: 412 QHRGSVYCLSFNPNGDLLATGSNDKTIRL 440
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 619 EHYSCVWRVSWNPTGTLLASSGDDSCVRL 533
+H V+ +S+NP G LLA+ +D +RL
Sbjct: 678 QHRGSVYCLSFNPNGDLLATGSNDKTIRL 706
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 619 EHYSCVWRVSWNPTGTLLASSGDDSCVRL 533
+H V+ +S+NP G LLA+ +D +RL
Sbjct: 678 QHRGSVYCLSFNPNGDLLATGSNDKTIRL 706
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 610 SCVWRVSWNPTGTLLASSGDDSCVRLW 530
+ ++ +SWNPTG L SS V LW
Sbjct: 551 NAIFSLSWNPTGYGLLSSSKQKFVTLW 577
>Z72502-4|CAA96589.1| 750|Caenorhabditis elegans Hypothetical
protein C08B6.7 protein.
Length = 750
Score = 29.1 bits (62), Expect = 3.0
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
E++A ++ + +SW+P L+A+ G+D + ++++
Sbjct: 338 ELLAVMKSYFGGLLTLSWSPDAKLIATGGEDDLLTVYSV 376
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 595 VSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCV 497
+SW+P G LAS D +R W + W+CV
Sbjct: 182 LSWDPIGKYLASLEGDKKLRFW---ATDSWQCV 211
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 595 VSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCV 497
+SW+P G LAS D +R W + W+CV
Sbjct: 470 LSWDPIGKYLASLEGDKKLRFW---ATDSWQCV 499
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
E++ +D H V +++ AS+ DD VR+W +
Sbjct: 396 EIVQEYDRHLQAVNSITFFDKNRRFASTSDDKSVRIWEWE 435
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNETV 473
+ + +F+ H + + V ++P G A+ DD+ RL++++ Q V V++ E++
Sbjct: 233 QCVQSFEGHEADINTVRFHPNGDAFATGSDDATCRLFDLRADRQ---VCVYEKESI 285
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 625 FDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQ 521
FDEH S V V W +G + S+ D VR +++
Sbjct: 398 FDEHTSGVTAVKWTQSGRAILSASLDGTVRAHDLK 432
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNETVG 470
H + ++P G+L+A+ +D V++WN + C F T G
Sbjct: 359 HSLRITTAEYSPDGSLMATGAEDGKVKIWNSR---SSFCTVTFDEHTSG 404
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = -2
Query: 640 EVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNETV 473
+ + +F+ H + + V ++P G A+ DD+ RL++++ Q V V++ E++
Sbjct: 233 QCVQSFEGHEADINTVRFHPNGDAFATGSDDATCRLFDLRADRQ---VCVYEKESI 285
>Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical
protein F35G12.4b protein.
Length = 680
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 586 NPTGTLLASSGDDSCVRLWNMQYLNQWKCVA 494
N GT S+G D+ +RLW+ + Q +C+A
Sbjct: 229 NDDGTRALSAGSDATIRLWD---IGQQRCIA 256
>Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical
protein F35G12.4a protein.
Length = 683
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 586 NPTGTLLASSGDDSCVRLWNMQYLNQWKCVA 494
N GT S+G D+ +RLW+ + Q +C+A
Sbjct: 229 NDDGTRALSAGSDATIRLWD---IGQQRCIA 256
>AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical
protein Y54G9A.6 protein.
Length = 343
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWN 527
H V + +NP +L+ S G DS V+LW+
Sbjct: 108 HALAVRCMEFNPMSSLIVSGGWDSSVKLWD 137
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -2
Query: 625 FDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFK 485
F H + ++ +PT L S+ DD +R+W+ + N+W+ F+
Sbjct: 187 FTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWE--NEWRMEQEFQ 231
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 616 HYSCVWRVSWNPTGTLLASSGDDSCVRLWNM 524
H ++ +++P GT LA+SG D + WN+
Sbjct: 37 HEGEIYTGAFSPDGTCLATSGYDQKIFFWNV 67
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 586 NPTGTLLASSGDDSCVRLWNMQ 521
NP L+AS+G D+ VRLW ++
Sbjct: 218 NPDHLLVASAGQDTYVRLWAIE 239
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 646 KSEVMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLW 530
KSE++ H V +++WNP+GT L + D +L+
Sbjct: 601 KSEIIG----HQLTVTQIAWNPSGTRLLTVSRDRTAKLY 635
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -2
Query: 625 FDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKNET 476
F+ H + + +PT + SS DD V++W+ N+W F+ T
Sbjct: 95 FEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWD--NKWAMKQSFEGHT 142
>U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical
protein C54G7.4 protein.
Length = 1199
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -2
Query: 637 VMAAFDEHYSCVWRVSWNPTGTLLASSGDDSCVRLWNMQYLNQWKCVAVFKN 482
V A + H + V +WN L +S + +W M + QW C + N
Sbjct: 61 VNQALEGHNATVMNATWNENNQKLTTSDTSGLIIVWGM-FNEQW-CEEMINN 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,890,456
Number of Sequences: 27780
Number of extensions: 234194
Number of successful extensions: 792
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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