Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13b04
(663 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 386 e-107
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 386 e-107
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 386 e-107
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 386 e-107
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 386 e-107
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 386 e-107
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 386 e-107
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 386 e-107
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 386 e-107
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 386 e-107
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 386 e-107
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 386 e-107
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 385 e-107
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 382 e-106
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 259 6e-69
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 225 8e-59
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 192 7e-49
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 178 2e-44
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 151 3e-36
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 35 0.30
BC040232-1|AAH40232.1| 696|Homo sapiens CCDC88B protein protein. 30 8.5
BC030194-1|AAH30194.1| 223|Homo sapiens CCDC88B protein protein. 30 8.5
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 386 bits (951), Expect = e-107
Identities = 186/220 (84%), Positives = 198/220 (90%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 74 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 193
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 194 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 233
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 386 bits (951), Expect = e-107
Identities = 186/220 (84%), Positives = 198/220 (90%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 74 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 193
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 194 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 233
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 386 bits (951), Expect = e-107
Identities = 186/220 (84%), Positives = 198/220 (90%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 74 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 193
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 194 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 233
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 386 bits (951), Expect = e-107
Identities = 186/220 (84%), Positives = 198/220 (90%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 74 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 193
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 194 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 233
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 386 bits (951), Expect = e-107
Identities = 186/220 (84%), Positives = 198/220 (90%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 74 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 193
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 194 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 233
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 386 bits (951), Expect = e-107
Identities = 186/220 (84%), Positives = 198/220 (90%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 74 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 193
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 194 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 233
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 386 bits (951), Expect = e-107
Identities = 186/220 (84%), Positives = 198/220 (90%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 74 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 193
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 194 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 233
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 386 bits (951), Expect = e-107
Identities = 186/220 (84%), Positives = 198/220 (90%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 13 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 72
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 73 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 132
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 133 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 192
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 193 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 232
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 386 bits (951), Expect = e-107
Identities = 186/220 (84%), Positives = 198/220 (90%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 13 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 72
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 73 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 132
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 133 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 192
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 193 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 232
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 386 bits (951), Expect = e-107
Identities = 186/220 (84%), Positives = 198/220 (90%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 74 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 193
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 194 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 233
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 386 bits (951), Expect = e-107
Identities = 186/220 (84%), Positives = 198/220 (90%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 74 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 193
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 194 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 233
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 386 bits (951), Expect = e-107
Identities = 186/220 (84%), Positives = 198/220 (90%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 74 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 193
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 194 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 233
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 385 bits (947), Expect = e-107
Identities = 185/220 (84%), Positives = 198/220 (90%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 74 QKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 193
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 194 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 233
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 382 bits (940), Expect = e-106
Identities = 184/218 (84%), Positives = 196/218 (89%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 301
QKRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRACYGVLRFIMESGA+G
Sbjct: 74 QKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Query: 300 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 121
CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 193
Query: 120 QQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAP 7
GK GPKKP PDH+ + EPKDE +P P SE + P
Sbjct: 194 PTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKP 231
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 259 bits (635), Expect = 6e-69
Identities = 123/148 (83%), Positives = 130/148 (87%)
Frame = -1
Query: 444 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 265
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 264 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQP 85
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 84 DHILVTEPKDEPVPLEPTSEVRSLAPAP 1
DH+ + EPKDE +P P SE + P P
Sbjct: 121 DHVSIVEPKDEILPTTPISEQKGGKPEP 148
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 225 bits (551), Expect = 8e-59
Identities = 110/127 (86%), Positives = 116/127 (91%)
Frame = -1
Query: 516 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 337
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 336 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 157
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 156 LGIKVKI 136
V +
Sbjct: 126 WDTSVHL 132
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 192 bits (469), Expect = 7e-49
Identities = 94/104 (90%), Positives = 100/104 (96%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 349
QKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 74 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 178 bits (433), Expect = 2e-44
Identities = 83/107 (77%), Positives = 89/107 (83%)
Frame = -1
Query: 321 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 142
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 141 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP 1
KIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEP 107
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 151 bits (365), Expect = 3e-36
Identities = 73/82 (89%), Positives = 78/82 (95%)
Frame = -1
Query: 660 DGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 481
DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VV
Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73
Query: 480 QKRFNIPEQSVELYAEKVATRG 415
QKRF PE SVELYAEKVATRG
Sbjct: 74 QKRFGFPEGSVELYAEKVATRG 95
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 34.7 bits (76), Expect = 0.30
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -3
Query: 178 CASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPR 38
CAS RS R Q Q P P A RP PG APR
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160
>BC040232-1|AAH40232.1| 696|Homo sapiens CCDC88B protein protein.
Length = 696
Score = 29.9 bits (64), Expect = 8.5
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = -2
Query: 614 WPRTATPAWKSGS---LPSARRSLLWPP 540
WP A P W SGS LP +RSL PP
Sbjct: 634 WPPRAAPGWSSGSSRWLPLRQRSLGDPP 661
>BC030194-1|AAH30194.1| 223|Homo sapiens CCDC88B protein protein.
Length = 223
Score = 29.9 bits (64), Expect = 8.5
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = -2
Query: 614 WPRTATPAWKSGS---LPSARRSLLWPP 540
WP A P W SGS LP +RSL PP
Sbjct: 161 WPPRAAPGWSSGSSRWLPLRQRSLGDPP 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,204,271
Number of Sequences: 237096
Number of extensions: 2466524
Number of successful extensions: 15024
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 14405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15006
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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