BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13a14
(702 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058314-1|AAL13543.1| 414|Drosophila melanogaster GH07925p pro... 253 2e-67
AE014296-3076|AAF49216.1| 414|Drosophila melanogaster CG3902-PA... 253 2e-67
AY119269-1|AAM51129.1| 405|Drosophila melanogaster SD24551p pro... 145 6e-35
AE014297-2721|AAF55709.1| 405|Drosophila melanogaster CG4703-PA... 145 6e-35
AY060960-1|AAL28508.1| 333|Drosophila melanogaster GM09085p pro... 142 3e-34
AY113386-1|AAM29391.1| 415|Drosophila melanogaster RE05302p pro... 141 7e-34
AE014297-1462|AAF54761.1| 415|Drosophila melanogaster CG4860-PA... 141 7e-34
AY089546-1|AAL90284.1| 419|Drosophila melanogaster LD22634p pro... 101 7e-22
AE014296-1308|AAF50524.1| 419|Drosophila melanogaster CG12262-P... 101 7e-22
AY089640-1|AAL90378.1| 420|Drosophila melanogaster RE62833p pro... 95 8e-20
AE014296-1477|AAF50398.1| 420|Drosophila melanogaster CG6638-PA... 95 8e-20
AE013599-2855|AAF57579.1| 655|Drosophila melanogaster CG7461-PA... 91 2e-18
AY058305-1|AAL13534.1| 419|Drosophila melanogaster GH06693p pro... 57 2e-08
AE014134-1106|AAF52395.1| 419|Drosophila melanogaster CG9547-PA... 57 2e-08
AY060744-1|AAL28292.1| 365|Drosophila melanogaster GH19655p pro... 30 3.5
AE014298-1523|AAF47974.1| 365|Drosophila melanogaster CG15208-P... 30 3.5
AE014296-3573|AAF51744.3| 2352|Drosophila melanogaster CG7177-PA... 30 3.5
AY069686-1|AAL39831.1| 570|Drosophila melanogaster LD45776p pro... 29 6.1
AF328906-1|AAK82338.1| 570|Drosophila melanogaster stromal inte... 29 6.1
AE014298-2292|AAS65372.1| 454|Drosophila melanogaster CG9126-PB... 29 6.1
AE014298-2291|AAF48542.2| 570|Drosophila melanogaster CG9126-PA... 29 6.1
AE014298-2290|AAS65371.1| 477|Drosophila melanogaster CG9126-PC... 29 6.1
U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase ... 29 8.1
AY060857-1|AAL28405.1| 276|Drosophila melanogaster GM03260p pro... 29 8.1
AF018078-1|AAB70303.1| 654|Drosophila melanogaster unknown prot... 29 8.1
AE014297-1368|AAF54691.1| 1487|Drosophila melanogaster CG6920-PA... 29 8.1
>AY058314-1|AAL13543.1| 414|Drosophila melanogaster GH07925p
protein.
Length = 414
Score = 253 bits (619), Expect = 2e-67
Identities = 120/178 (67%), Positives = 141/178 (79%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
IRASGTC + FDNV+V E +ILG GFLNEGRIGIAAQM+GL QG DATIP
Sbjct: 235 IRASGTCQLTFDNVRVPEENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIP 294
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y LERKQFG IY FQ + +QIA + T++EAARL+TYNAARL+E G F KEAAMAKY+A
Sbjct: 295 YLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMAKYYA 354
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREY 167
SE+AQ KC+D+MGGVGFTRDFPQEK+YRD KIG IYEGT+NMQL TIAK ++++Y
Sbjct: 355 SEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKKDY 412
>AE014296-3076|AAF49216.1| 414|Drosophila melanogaster CG3902-PA
protein.
Length = 414
Score = 253 bits (619), Expect = 2e-67
Identities = 120/178 (67%), Positives = 141/178 (79%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
IRASGTC + FDNV+V E +ILG GFLNEGRIGIAAQM+GL QG DATIP
Sbjct: 235 IRASGTCQLTFDNVRVPEENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIP 294
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y LERKQFG IY FQ + +QIA + T++EAARL+TYNAARL+E G F KEAAMAKY+A
Sbjct: 295 YLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMAKYYA 354
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREY 167
SE+AQ KC+D+MGGVGFTRDFPQEK+YRD KIG IYEGT+NMQL TIAK ++++Y
Sbjct: 355 SEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKKDY 412
>AY119269-1|AAM51129.1| 405|Drosophila melanogaster SD24551p
protein.
Length = 405
Score = 145 bits (351), Expect = 6e-35
Identities = 74/178 (41%), Positives = 106/178 (59%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
IR S TC + F++ V + ++LGE L+ GRIGIA Q +G+ Q ++ +
Sbjct: 226 IRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIGQAALELAVD 285
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y +R+ FGK I + Q I +IA + +E+ARLLT+ AA LK+ + KEAAMAK A
Sbjct: 286 YAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLAA 345
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREY 167
SE A + +CI +GG+G+ D E+ YRDA+I IYEGTS +Q IA + +EY
Sbjct: 346 SEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVIAGSILKEY 403
>AE014297-2721|AAF55709.1| 405|Drosophila melanogaster CG4703-PA
protein.
Length = 405
Score = 145 bits (351), Expect = 6e-35
Identities = 74/178 (41%), Positives = 106/178 (59%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
IR S TC + F++ V + ++LGE L+ GRIGIA Q +G+ Q ++ +
Sbjct: 226 IRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIGQAALELAVD 285
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y +R+ FGK I + Q I +IA + +E+ARLLT+ AA LK+ + KEAAMAK A
Sbjct: 286 YAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLAA 345
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREY 167
SE A + +CI +GG+G+ D E+ YRDA+I IYEGTS +Q IA + +EY
Sbjct: 346 SEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVIAGSILKEY 403
>AY060960-1|AAL28508.1| 333|Drosophila melanogaster GM09085p
protein.
Length = 333
Score = 142 bits (345), Expect = 3e-34
Identities = 73/177 (41%), Positives = 107/177 (60%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+RA+ TC + ++V V S +LG L+ GRIGIAAQ G+ Q ++ +
Sbjct: 153 MRATSTCQLVLEDVHVPRSRVLGAAGDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVD 212
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y+ +R FGK++ Q I ++A + T++E +RLLT+ AA LK++G KEAAMAK A
Sbjct: 213 YSQKRMAFGKQLARLQLIQQKLADMATRVEISRLLTWRAAWLKDNGLPITKEAAMAKLHA 272
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLERE 170
SE A +CI +GG+G+T D P E +YR+A++ IYEGTS +Q IA + RE
Sbjct: 273 SESATFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANAVLRE 329
>AY113386-1|AAM29391.1| 415|Drosophila melanogaster RE05302p
protein.
Length = 415
Score = 141 bits (342), Expect = 7e-34
Identities = 73/177 (41%), Positives = 106/177 (59%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+RA+ TC + ++V V S +LG L+ GRIGIAAQ G+ Q ++ +
Sbjct: 235 MRATSTCQLVLEDVHVPRSRVLGAAGDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVD 294
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y+ +R FGK + Q I ++A + T++E +RLLT+ AA LK++G KEAAMAK A
Sbjct: 295 YSQKRVAFGKHLARLQLIQQKLADMATRVEISRLLTWRAAWLKDNGLPITKEAAMAKLHA 354
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLERE 170
SE A +CI +GG+G+T D P E +YR+A++ IYEGTS +Q IA + RE
Sbjct: 355 SESATFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANAVLRE 411
>AE014297-1462|AAF54761.1| 415|Drosophila melanogaster CG4860-PA
protein.
Length = 415
Score = 141 bits (342), Expect = 7e-34
Identities = 73/177 (41%), Positives = 106/177 (59%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+RA+ TC + ++V V S +LG L+ GRIGIAAQ G+ Q ++ +
Sbjct: 235 MRATSTCQLVLEDVHVPRSRVLGAAGDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVD 294
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y+ +R FGK + Q I ++A + T++E +RLLT+ AA LK++G KEAAMAK A
Sbjct: 295 YSQKRVAFGKHLARLQLIQQKLADMATRVEISRLLTWRAAWLKDNGLPITKEAAMAKLHA 354
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLERE 170
SE A +CI +GG+G+T D P E +YR+A++ IYEGTS +Q IA + RE
Sbjct: 355 SESATFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANAVLRE 411
>AY089546-1|AAL90284.1| 419|Drosophila melanogaster LD22634p
protein.
Length = 419
Score = 101 bits (243), Expect = 7e-22
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Frame = -3
Query: 697 RASGTCMVHFDNVKVHESSIL-GEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
RAS T + F++V+V + ++L GE F ++ R +AA +GL Q C+D +
Sbjct: 239 RASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTF-DKTRPPVAAGAVGLAQRCLDEALK 297
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y LERK FG I Q + + +A + +E +RL +A + G A++AK A
Sbjct: 298 YALERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRRNSYYASIAKCHA 357
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAK 185
+++A + S + GG GF ++P EK RDAKI IYEGTS +Q I++
Sbjct: 358 ADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISR 409
>AE014296-1308|AAF50524.1| 419|Drosophila melanogaster CG12262-PA
protein.
Length = 419
Score = 101 bits (243), Expect = 7e-22
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Frame = -3
Query: 697 RASGTCMVHFDNVKVHESSIL-GEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
RAS T + F++V+V + ++L GE F ++ R +AA +GL Q C+D +
Sbjct: 239 RASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTF-DKTRPPVAAGAVGLAQRCLDEALK 297
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y LERK FG I Q + + +A + +E +RL +A + G A++AK A
Sbjct: 298 YALERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRRNSYYASIAKCHA 357
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAK 185
+++A + S + GG GF ++P EK RDAKI IYEGTS +Q I++
Sbjct: 358 ADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISR 409
>AY089640-1|AAL90378.1| 420|Drosophila melanogaster RE62833p
protein.
Length = 420
Score = 95.1 bits (226), Expect = 8e-20
Identities = 57/178 (32%), Positives = 87/178 (48%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+R S TC + F ++KV +ILG+ L+ R+ +AA +GL Q D
Sbjct: 242 MRGSSTCELVFQDLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGLMQAACDVAFD 301
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y +RKQ K I EFQ + ++A + T L A R Y AR + G+ K+ A +
Sbjct: 302 YAHQRKQMNKLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCDAGNRSPKDCAGVILYT 361
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREY 167
+E A + I +GG G+ + P + RDAK+ I GTS ++ I + L +EY
Sbjct: 362 AEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGTSEIRRWLIGRQLNQEY 419
>AE014296-1477|AAF50398.1| 420|Drosophila melanogaster CG6638-PA
protein.
Length = 420
Score = 95.1 bits (226), Expect = 8e-20
Identities = 57/178 (32%), Positives = 87/178 (48%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+R S TC + F ++KV +ILG+ L+ R+ +AA +GL Q D
Sbjct: 242 MRGSSTCELVFQDLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGLMQAACDVAFD 301
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y +RKQ K I EFQ + ++A + T L A R Y AR + G+ K+ A +
Sbjct: 302 YAHQRKQMNKLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCDAGNRSPKDCAGVILYT 361
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREY 167
+E A + I +GG G+ + P + RDAK+ I GTS ++ I + L +EY
Sbjct: 362 AEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGTSEIRRWLIGRQLNQEY 419
>AE013599-2855|AAF57579.1| 655|Drosophila melanogaster CG7461-PA
protein.
Length = 655
Score = 90.6 bits (215), Expect = 2e-18
Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 1/166 (0%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
I+AS T V+F++VK+ ++LG+ LN GR G+ A + G + C++
Sbjct: 303 IKASNTAEVYFEDVKIPIENVLGKEGDGFKVAMNILNNGRFGMGATLSGTMKKCIEQATE 362
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHG-HEFVKEAAMAKYF 344
+ R QFG+K+ + I ++A + A + + ++ + G ++ EAA++K +
Sbjct: 363 HANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKDYHLEAAISKIY 422
Query: 343 ASEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNM 206
ASE A + + I +GG+G+ D E+ RD +I I+EGT+++
Sbjct: 423 ASESAWYVCDEAIQILGGMGYMVDNGLERVLRDLRIFRIFEGTNDI 468
>AY058305-1|AAL13534.1| 419|Drosophila melanogaster GH06693p
protein.
Length = 419
Score = 57.2 bits (132), Expect = 2e-08
Identities = 41/174 (23%), Positives = 76/174 (43%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+RAS T M+ D V+V E +L LN R GIA +G + C++
Sbjct: 239 LRASPTGMILMDEVRVPEEQLLPNVAGFSGPFSC-LNNARYGIAWGALGAAETCVEIARQ 297
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
YTL+RKQFG+ + Q I ++A T++ + RLK+ ++ K
Sbjct: 298 YTLDRKQFGRPLAANQLIQKKLADAITEIALGLQACLHVGRLKDQKLHTPDMISLLKRNN 357
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLL 179
+ + + + D +G G + ++ + + + YEGT ++ + + +
Sbjct: 358 TGKSLDIARQMRDMLGANGISDEYHVIRHVINLESVNTYEGTHDIHALILGRAI 411
>AE014134-1106|AAF52395.1| 419|Drosophila melanogaster CG9547-PA
protein.
Length = 419
Score = 57.2 bits (132), Expect = 2e-08
Identities = 41/174 (23%), Positives = 76/174 (43%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+RAS T M+ D V+V E +L LN R GIA +G + C++
Sbjct: 239 LRASPTGMILMDEVRVPEEQLLPNVAGFSGPFSC-LNNARYGIAWGALGAAETCVEIARQ 297
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
YTL+RKQFG+ + Q I ++A T++ + RLK+ ++ K
Sbjct: 298 YTLDRKQFGRPLAANQLIQKKLADAITEIALGLQACLHVGRLKDQKLHTPDMISLLKRNN 357
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLL 179
+ + + + D +G G + ++ + + + YEGT ++ + + +
Sbjct: 358 TGKSLDIARQMRDMLGANGISDEYHVIRHVINLESVNTYEGTHDIHALILGRAI 411
>AY060744-1|AAL28292.1| 365|Drosophila melanogaster GH19655p
protein.
Length = 365
Score = 29.9 bits (64), Expect = 3.5
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +3
Query: 270 KSLVKPTPPIKSMHFEVNVCA-ISEAKYLAIAASLTNSW----PCSFSLAALY 413
KSLV+ T +K ++ N A E KYL A SLT+ W PCS + + Y
Sbjct: 58 KSLVRCTR-LKELYLRQNEIADFDELKYLVNAKSLTSLWLLDNPCSIAAGSNY 109
>AE014298-1523|AAF47974.1| 365|Drosophila melanogaster CG15208-PA
protein.
Length = 365
Score = 29.9 bits (64), Expect = 3.5
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +3
Query: 270 KSLVKPTPPIKSMHFEVNVCA-ISEAKYLAIAASLTNSW----PCSFSLAALY 413
KSLV+ T +K ++ N A E KYL A SLT+ W PCS + + Y
Sbjct: 58 KSLVRCTR-LKELYLRQNEIADFDELKYLVNAKSLTSLWLLDNPCSIAAGSNY 109
>AE014296-3573|AAF51744.3| 2352|Drosophila melanogaster CG7177-PA
protein.
Length = 2352
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = -2
Query: 542 LYGRNDSLHTRKETIRKEDLRVSGHQLPNRTPADTVGSRPSSNIQ 408
L G N S+ + ++T++ +++ SGH+ NR+ + P+S ++
Sbjct: 10 LKGENTSISSEEQTVQGANIQKSGHRSFNRSASSRQKPNPTSKLK 54
>AY069686-1|AAL39831.1| 570|Drosophila melanogaster LD45776p
protein.
Length = 570
Score = 29.1 bits (62), Expect = 6.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 635 WRIWQRVQVRGWFLERRSDW 576
W W R +V W +E+ +DW
Sbjct: 202 WEAWLRSEVHNWTIEQTTDW 221
>AF328906-1|AAK82338.1| 570|Drosophila melanogaster stromal
interaction molecule-likeprotein STIM protein.
Length = 570
Score = 29.1 bits (62), Expect = 6.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 635 WRIWQRVQVRGWFLERRSDW 576
W W R +V W +E+ +DW
Sbjct: 202 WEAWLRSEVHNWTIEQTTDW 221
>AE014298-2292|AAS65372.1| 454|Drosophila melanogaster CG9126-PB,
isoform B protein.
Length = 454
Score = 29.1 bits (62), Expect = 6.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 635 WRIWQRVQVRGWFLERRSDW 576
W W R +V W +E+ +DW
Sbjct: 86 WEAWLRSEVHNWTIEQTTDW 105
>AE014298-2291|AAF48542.2| 570|Drosophila melanogaster CG9126-PA,
isoform A protein.
Length = 570
Score = 29.1 bits (62), Expect = 6.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 635 WRIWQRVQVRGWFLERRSDW 576
W W R +V W +E+ +DW
Sbjct: 202 WEAWLRSEVHNWTIEQTTDW 221
>AE014298-2290|AAS65371.1| 477|Drosophila melanogaster CG9126-PC,
isoform C protein.
Length = 477
Score = 29.1 bits (62), Expect = 6.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 635 WRIWQRVQVRGWFLERRSDW 576
W W R +V W +E+ +DW
Sbjct: 109 WEAWLRSEVHNWTIEQTTDW 128
>U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase
homolog protein.
Length = 1487
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 283 FTRDFPQEKFYRDAKIGTIYEGTSNMQ 203
FT DFPQ Y I + EGT N +
Sbjct: 1224 FTNDFPQAYLYLGNNISKLMEGTPNFE 1250
>AY060857-1|AAL28405.1| 276|Drosophila melanogaster GM03260p
protein.
Length = 276
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 283 FTRDFPQEKFYRDAKIGTIYEGTSNMQ 203
FT DFPQ Y I + EGT N +
Sbjct: 13 FTNDFPQAYLYLGNNISKLMEGTPNFE 39
>AF018078-1|AAB70303.1| 654|Drosophila melanogaster unknown
protein.
Length = 654
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 261 SCGKSLVKPTPPIKSMHFEVNVCAISEAKYLAIAASLT 374
S +S+VKP P+ + FE + C+ +YL ++L+
Sbjct: 616 SSSQSIVKPESPLVTKAFEQSSCSFDYMRYLNFQSTLS 653
>AE014297-1368|AAF54691.1| 1487|Drosophila melanogaster CG6920-PA
protein.
Length = 1487
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 283 FTRDFPQEKFYRDAKIGTIYEGTSNMQ 203
FT DFPQ Y I + EGT N +
Sbjct: 1224 FTNDFPQAYLYLGNNISKLMEGTPNFE 1250
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,574,899
Number of Sequences: 53049
Number of extensions: 646050
Number of successful extensions: 1739
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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