Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13a14
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 249 2e-66
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 241 4e-64
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 162 3e-40
U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical pr... 138 6e-37
U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical pr... 138 6e-37
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 116 1e-26
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 116 2e-26
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 111 6e-25
U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical pr... 102 3e-22
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 100 1e-21
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 100 1e-21
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 99 3e-21
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 97 1e-20
U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical pr... 95 6e-20
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 93 2e-19
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 74 9e-14
U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 65 5e-11
Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AL032621-7|CAJ30236.1| 608|Caenorhabditis elegans Hypothetical ... 48 9e-06
AL032621-6|CAA21490.1| 617|Caenorhabditis elegans Hypothetical ... 48 9e-06
U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical pr... 28 5.6
U40797-10|AAK95871.1| 617|Caenorhabditis elegans Gex interactin... 28 5.6
U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-1... 28 5.6
U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable abnorm... 28 5.6
U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein. 28 5.6
U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein. 28 5.6
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto... 28 7.4
AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin recep... 28 7.4
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 27 9.8
AF125961-2|AAD14739.1| 343|Caenorhabditis elegans Serpentine re... 27 9.8
AF036692-8|AAB88329.1| 162|Caenorhabditis elegans Hypothetical ... 27 9.8
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 249 bits (609), Expect = 2e-66
Identities = 114/180 (63%), Positives = 144/180 (80%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
IRAS TC VHFDNV+VH+SSILGE LN GRIGI AQM+GL QGC D TIP
Sbjct: 238 IRASSTCSVHFDNVRVHKSSILGEYGKGYKYAIECLNAGRIGIGAQMLGLAQGCFDQTIP 297
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y +R+QFG+++ +FQG+ +QI + ++EAARLL YNAAR+K++G FV+EAAMAK FA
Sbjct: 298 YLQQREQFGQRLIDFQGMQHQIGQTRMEIEAARLLVYNAARMKQNGLPFVREAAMAKLFA 357
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREYTQ 161
S++A T TSKC++++GGVGFT++FP EKFYRD+KIGTIYEGTSN+QL TIAKL++ EY Q
Sbjct: 358 SQVATTATSKCVEWLGGVGFTKEFPVEKFYRDSKIGTIYEGTSNIQLNTIAKLVDIEYQQ 417
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 241 bits (589), Expect = 4e-64
Identities = 109/178 (61%), Positives = 141/178 (79%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
IRAS TC VHFDNV+VH+S+ILGE LN GRI I AQMIGL QGC D TIP
Sbjct: 246 IRASSTCQVHFDNVRVHKSAILGEYGKGYKYAIECLNAGRIAIGAQMIGLAQGCFDQTIP 305
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y +R+QFG+++ +FQG+ +QIA +T++EAARLL YNAAR+KE+G +V+EAAMAK FA
Sbjct: 306 YLQQREQFGQRLIDFQGLQHQIAQARTEIEAARLLVYNAARMKEYGIPYVREAAMAKLFA 365
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREY 167
S++A + +++C+ ++GGVGFT++FP EKFYRDA IG IYEGTSN+QL TIAKL++ EY
Sbjct: 366 SQVATSTSAQCVKWLGGVGFTKEFPAEKFYRDAMIGEIYEGTSNIQLNTIAKLIDNEY 423
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 162 bits (393), Expect = 3e-40
Identities = 73/121 (60%), Positives = 95/121 (78%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+R+S TC +HFDNV+VH+S+ILGE +LN GRIGI AQM+GL QGC D TIP
Sbjct: 173 VRSSSTCPLHFDNVRVHKSAILGEFGKGYKYAIEYLNAGRIGIGAQMLGLAQGCFDQTIP 232
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y +R+QFG++I +FQG+ +QIA ++T++EAARLL YNAAR+K+HG FV+EAAMAK FA
Sbjct: 233 YLQQREQFGQRIIDFQGMQHQIAQVRTEIEAARLLVYNAARMKQHGLPFVREAAMAKLFA 292
Query: 340 S 338
S
Sbjct: 293 S 293
>U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical
protein C17C3.12b protein.
Length = 307
Score = 138 bits (335), Expect(2) = 6e-37
Identities = 61/102 (59%), Positives = 83/102 (81%)
Frame = -3
Query: 472 GISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMG 293
G+ +QIA +QT++EAARL+ YN AR+K+ G FVKEA+MAKY+A E+A T +CI+++G
Sbjct: 202 GLQHQIAKIQTEIEAARLMVYNCARMKDCGMPFVKEASMAKYYAPEVACKTTKQCIEWLG 261
Query: 292 GVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREY 167
GVGFT++F EKFYRDA +G IYEGTSN+QL TIAK ++ E+
Sbjct: 262 GVGFTKNFMAEKFYRDAVVGGIYEGTSNIQLNTIAKFIDNEF 303
Score = 33.5 bits (73), Expect(2) = 6e-37
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQM 560
+RA VH ++V+V ++SI+GE LN RI I AQM
Sbjct: 155 MRAGTIAQVHLNSVRVPKTSIVGEYGKGYKYAIEVLNASRIVIGAQM 201
>U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical
protein C17C3.12c protein.
Length = 220
Score = 138 bits (335), Expect(2) = 6e-37
Identities = 61/102 (59%), Positives = 83/102 (81%)
Frame = -3
Query: 472 GISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMG 293
G+ +QIA +QT++EAARL+ YN AR+K+ G FVKEA+MAKY+A E+A T +CI+++G
Sbjct: 115 GLQHQIAKIQTEIEAARLMVYNCARMKDCGMPFVKEASMAKYYAPEVACKTTKQCIEWLG 174
Query: 292 GVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREY 167
GVGFT++F EKFYRDA +G IYEGTSN+QL TIAK ++ E+
Sbjct: 175 GVGFTKNFMAEKFYRDAVVGGIYEGTSNIQLNTIAKFIDNEF 216
Score = 33.5 bits (73), Expect(2) = 6e-37
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQM 560
+RA VH ++V+V ++SI+GE LN RI I AQM
Sbjct: 68 MRAGTIAQVHLNSVRVPKTSIVGEYGKGYKYAIEVLNASRIVIGAQM 114
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 116 bits (280), Expect = 1e-26
Identities = 62/179 (34%), Positives = 95/179 (53%)
Frame = -3
Query: 697 RASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIPY 518
R S T ++ F++V+V ++LG + R G+AA +GL C+D + Y
Sbjct: 233 RCSDTRVITFEDVRVPAENVLGAPGAGFKVAMEAFDMTRPGVAAGALGLSWRCLDESAKY 292
Query: 517 TLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFAS 338
LERK FG I Q + + +A + LE ARL+TY +A ++ A++AK FA+
Sbjct: 293 ALERKAFGTVIANHQAVQFMLADMAVNLELARLITYKSANDVDNKVRSSYNASIAKCFAA 352
Query: 337 EIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREYTQ 161
+ A + + GG GF ++P EK RDAKI IYEGTS +Q I+++L + Q
Sbjct: 353 DTANQAATNAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRIVISRMLLGHFAQ 411
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 116 bits (279), Expect = 2e-26
Identities = 61/173 (35%), Positives = 92/173 (53%)
Frame = -3
Query: 697 RASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIPY 518
R S T + F++V+V ++++G ++ R +AA G+ C+D Y
Sbjct: 230 RCSDTRGITFEDVRVPAANVVGAPGEGFKVAMKTFDKTRPTVAALATGVAYRCLDVATQY 289
Query: 517 TLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFAS 338
+LERK FG +I QG+S+ +A + E ARL+TY + + G A++AK FAS
Sbjct: 290 SLERKAFGTQIANHQGVSFLLAEMAINCELARLMTYKSGAEVDAGRPGSYYASIAKLFAS 349
Query: 337 EIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLL 179
+ A + + GG GF ++P EK RDAKI IYEGTS +Q IA+ L
Sbjct: 350 DTANQAATNAVQIFGGAGFNTEYPAEKLMRDAKIFQIYEGTSQIQRMVIARQL 402
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 111 bits (266), Expect = 6e-25
Identities = 62/179 (34%), Positives = 91/179 (50%)
Frame = -3
Query: 697 RASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIPY 518
R S T + F++V+V + +ILG G + R +AA +GL C+D + Y
Sbjct: 227 RCSDTRSITFEDVRVPKENILGAPGAGFKVAMGAFDLTRPQVAASAVGLAWRCLDESTKY 286
Query: 517 TLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFAS 338
+ER FG I QG+ + IA + LE +RL TY AA + A++AK FA+
Sbjct: 287 AMERHAFGTPIANHQGVQFMIADMAINLELSRLFTYRAAAEVDSYGVSSYNASIAKCFAA 346
Query: 337 EIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREYTQ 161
+ A + GG GF ++P EK RDAKI IYEGTS +Q I + L + + +
Sbjct: 347 DTANVAATNACQIFGGAGFNCEYPVEKLMRDAKIYQIYEGTSQIQRMVIGRTLFQNFAK 405
>U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical
protein E04F6.5a protein.
Length = 613
Score = 102 bits (244), Expect = 3e-22
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
I+ S T VHFDN+K+ ++LG+ LN GR GI A G + C+ T+
Sbjct: 270 IKGSNTTEVHFDNLKIPVENLLGKEGEGFKVAMNILNNGRFGIPAACTGAMKHCIQKTVD 329
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHG-HEFVKEAAMAKYF 344
+ R QFGKK+ EF I ++ + ++L A + Y + + G E+ EAA+ K
Sbjct: 330 HITTRVQFGKKLQEFGNIQEKLVEMISKLYATESIVYMLSSNMDRGIKEYQLEAAIGKVL 389
Query: 343 ASEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNM 206
ASE A + I GG+GF R+ E+ RD +I I+EG +++
Sbjct: 390 ASENAWLVCDDAIQVHGGMGFMRETGLERVLRDLRIFRIFEGANDV 435
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 100 bits (239), Expect = 1e-21
Identities = 55/179 (30%), Positives = 89/179 (49%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+R S TC + FDN ++HES I+G L+ R+ ++ +GL Q D
Sbjct: 240 MRGSNTCELVFDNCEIHESQIMGGKGKGVYVLMTGLDYERLVLSGGPLGLMQAACDIAFD 299
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y +R FG+KI FQ + ++A + T L A+R Y A+ + G+ K+ A +
Sbjct: 300 YAHQRTAFGQKIGSFQLLQGKLADMYTTLNASRSYLYMVAKAADKGNVSNKDCAGVILYV 359
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREYT 164
+E + I +GG G+ D+P + RDAK+ I GTS ++ I + L +EY+
Sbjct: 360 AEKCTQVCLDAIQILGGNGYINDYPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNKEYS 418
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 100 bits (239), Expect = 1e-21
Identities = 55/179 (30%), Positives = 89/179 (49%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+R S TC + FDN ++HES I+G L+ R+ ++ +GL Q D
Sbjct: 240 MRGSNTCELVFDNCEIHESQIMGGKGKGVYVLMTGLDYERLVLSGGPLGLMQAACDIAFD 299
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y +R FG+KI FQ + ++A + T L A+R Y A+ + G+ K+ A +
Sbjct: 300 YAHQRTAFGQKIGSFQLLQGKLADMYTTLNASRSYLYMVAKAADKGNVSNKDCAGVILYV 359
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREYT 164
+E + I +GG G+ D+P + RDAK+ I GTS ++ I + L +EY+
Sbjct: 360 AEKCTQVCLDAIQILGGNGYINDYPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNKEYS 418
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 99.1 bits (236), Expect = 3e-21
Identities = 46/78 (58%), Positives = 55/78 (70%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
IRAS TC VHFDNV+VH+S+ILGE LN GRI I AQMIGL QGC D TIP
Sbjct: 153 IRASSTCQVHFDNVRVHKSAILGEYGKGYKYAIECLNAGRIAIGAQMIGLAQGCFDQTIP 212
Query: 520 YTLERKQFGKKIYEFQGI 467
Y +R+QFG+++ +FQ I
Sbjct: 213 YLQQREQFGQRLIDFQVI 230
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 97.1 bits (231), Expect = 1e-20
Identities = 56/168 (33%), Positives = 91/168 (54%), Gaps = 1/168 (0%)
Frame = -3
Query: 685 TCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIPYTLER 506
T ++ F++ KV ++ +G+ LN GRI IA+ +G Q MD I + R
Sbjct: 231 TRILTFEDCKVPITNQIGKDGFGFNIAMAGLNGGRINIASCSLGAAQRSMDLAIEHLKYR 290
Query: 505 KQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAA-RLKEHGHEFVKEAAMAKYFASEIA 329
KQFGK + +FQ +++A L T+L +RL+ NAA +L E V AMAK A++
Sbjct: 291 KQFGKSLADFQYNQFKLAELATKLYTSRLIVRNAAEQLDNDDPEKVALCAMAKLHATDNC 350
Query: 328 QTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAK 185
+ + + GG GF +D+P +++ RD ++ I EGT+ M I++
Sbjct: 351 FDVVNGALQMFGGYGFLKDYPVQQYLRDIRVHQILEGTNEMMRLLISR 398
>U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical
protein C37A2.3 protein.
Length = 442
Score = 94.7 bits (225), Expect = 6e-20
Identities = 52/176 (29%), Positives = 87/176 (49%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+R+S T + F++V+V S I+GE N+ R+ A + Q C+D TI
Sbjct: 261 MRSSDTVQLFFEDVRVPSSYIIGEEGRGFGYQMKQFNDERLVTVAVGLLPLQKCIDETIE 320
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y +R FGK + + Q I +Q+A L+ +LEA R L Y + G + AMAK
Sbjct: 321 YARDRLLFGKTLLDQQYIQFQLAELEAELEATRALLYRTVLARSRGDDVSMLTAMAKLKI 380
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLER 173
+A+ +T +C+ GG G+ + + +RD ++ +I G + ++ I K R
Sbjct: 381 GRLARAITDQCLQVWGGAGYLNENGISRAFRDFRLFSIGAGCDEVMMRIIHKAQSR 436
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 92.7 bits (220), Expect = 2e-19
Identities = 52/172 (30%), Positives = 86/172 (50%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+R+S T + F++V+V S I+GE N+ R+ A + Q C++ TI
Sbjct: 227 MRSSDTVQLFFEDVRVPSSYIIGEEGRGFAYQMNQFNDERLVTVAVGLLPLQKCINETIE 286
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
Y ER FGK + + Q + +++A L+ +LEA R L Y + G + AMAK
Sbjct: 287 YARERLIFGKTLLDQQYVQFRLAELEAELEATRSLLYRTVLARCQGEDVSMLTAMAKLKI 346
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAK 185
+A+ +T +C+ GG G+ D + +RD +I +I G + +Q I K
Sbjct: 347 GRLARKVTDQCLQIWGGAGYLNDNGISRAFRDFRIFSIGAGCDEVMMQIIHK 398
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 74.1 bits (174), Expect = 9e-14
Identities = 35/75 (46%), Positives = 46/75 (61%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+RA VH ++V+V ++SI+GE LN RI I AQM+GL QGC D TIP
Sbjct: 234 MRAGTIAQVHLNSVRVPKTSIVGEYGKGYKYAIEVLNASRIVIGAQMVGLAQGCFDQTIP 293
Query: 520 YTLERKQFGKKIYEF 476
Y ERKQFG ++ +F
Sbjct: 294 YLQERKQFGSRLIDF 308
>U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical
protein E04F6.5b protein.
Length = 408
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
I+ S T VHFDN+K+ ++LG+ LN GR GI A G + C+ T+
Sbjct: 270 IKGSNTTEVHFDNLKIPVENLLGKEGEGFKVAMNILNNGRFGIPAACTGAMKHCIQKTVD 329
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHG-HEFVKEAAMAK 350
+ R QFGKK+ EF I ++ + ++L A + Y + + G E+ EAA+ K
Sbjct: 330 HITTRVQFGKKLQEFGNIQEKLVEMISKLYATESIVYMLSSNMDRGIKEYQLEAAIGK 387
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical protein
K09H11.1 protein.
Length = 985
Score = 64.9 bits (151), Expect = 5e-11
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Frame = -3
Query: 676 VHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQF 497
+ F NV+V ++L G L GRI A ++IG + +D L R F
Sbjct: 813 ITFTNVRVPVGNMLLGEGKGFEIAQGRLGPGRIHHAMRLIGHAERAIDVIKDRLLTRIAF 872
Query: 496 GKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKE--HGHEFVKEAAMAKYFASEIAQT 323
G+K+ +F + ++A + ++E ARLL AA + + E E AM K A +A +
Sbjct: 873 GRKLVQFDSLRKELALSRCEVEQARLLVLKAAHMIDTVGPKEAKSEIAMIKVVAPNMAIS 932
Query: 322 LTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKL 182
+ + + G G T P FY A+ I +G + L+TIAK+
Sbjct: 933 ILDRAMQQQGARGLTPFTPLASFYVWARSLRIADGPDAVHLETIAKI 979
>Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical
protein F54D5.7 protein.
Length = 409
Score = 63.7 bits (148), Expect = 1e-10
Identities = 42/174 (24%), Positives = 80/174 (45%)
Frame = -3
Query: 700 IRASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIP 521
+RAS T + D+V V E ++L LN R+GIA +G + C
Sbjct: 230 LRASITGQIAMDDVPVPEENLLPNAEGLQGPFGC-LNNARLGIAWGALGAAEECFHLARQ 288
Query: 520 YTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFA 341
YTL+R+QFG+ + + Q + ++A + T++ +RLK+ G ++ ++ K +
Sbjct: 289 YTLDRQQFGRPLAQNQLMQLKMADMLTEISLGLQGCLRVSRLKDEGKVQSEQISIIKRNS 348
Query: 340 SEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLL 179
A + K D +GG G ++ + + + YEGT ++ + + +
Sbjct: 349 CGKALEVARKARDMLGGNGIVDEYHIMRHMVNLETVNTYEGTHDVHALILGRAI 402
>AL032621-7|CAJ30236.1| 608|Caenorhabditis elegans Hypothetical
protein Y45F3A.3b protein.
Length = 608
Score = 47.6 bits (108), Expect = 9e-06
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Frame = -3
Query: 595 LNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLL 416
LN RI A +G + + Y+ +R FG+ ++ + +A ++ + LL
Sbjct: 321 LNITRIHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLHTTTLAKMEVDTRGSMLL 380
Query: 415 TYNAARL---KEHGHEFVKEAAMA-------KYFASEIAQTLTSKCIDFMGGVGFTRDFP 266
+ AARL E G EA M K +A + A + S+ I+ GG G+ D
Sbjct: 381 LFEAARLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPMVSEGIECFGGQGYMEDTG 440
Query: 265 QEKFYRDAKIGTIYEGTSNM 206
RDA++ I+EGT+N+
Sbjct: 441 LPTLLRDAQVTPIWEGTTNV 460
>AL032621-6|CAA21490.1| 617|Caenorhabditis elegans Hypothetical
protein Y45F3A.3a protein.
Length = 617
Score = 47.6 bits (108), Expect = 9e-06
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Frame = -3
Query: 595 LNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLL 416
LN RI A +G + + Y+ +R FG+ ++ + +A ++ + LL
Sbjct: 330 LNITRIHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLHTTTLAKMEVDTRGSMLL 389
Query: 415 TYNAARL---KEHGHEFVKEAAMA-------KYFASEIAQTLTSKCIDFMGGVGFTRDFP 266
+ AARL E G EA M K +A + A + S+ I+ GG G+ D
Sbjct: 390 LFEAARLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPMVSEGIECFGGQGYMEDTG 449
Query: 265 QEKFYRDAKIGTIYEGTSNM 206
RDA++ I+EGT+N+
Sbjct: 450 LPTLLRDAQVTPIWEGTTNV 469
>U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical
protein F58F9.7 protein.
Length = 667
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = -3
Query: 595 LNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLL 416
L+ GR+GI A+ + C I Y++ R+QFG +G +I L+ L+ RL
Sbjct: 284 LSVGRLGIIAKGMMACTFASTIAIRYSVARRQFG----PVKGAENEIPVLEYPLQQYRLF 339
Query: 415 TYNAARL 395
Y +A +
Sbjct: 340 PYLSAAI 346
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 565 EPRYQSDLRSRNQP--RTCTLCHILQGYSIRAPSH 663
EPRY++D SR++P + + H +GY R PS+
Sbjct: 723 EPRYETDAPSRSRPLKKVEIIRHPERGYDRRQPSY 757
>Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical
protein F14F3.1c protein.
Length = 296
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -2
Query: 620 RVQVRGWFLERRSDWYRGSDDRSVSGLYGRNDSLHTRKETIRKEDLRVSGHQLPNRTPAD 441
R+QV WF RR+ W R R+ + SL T + S P +PA
Sbjct: 101 RIQV--WFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPAS 158
Query: 440 TVGSRPSSN 414
T PS+N
Sbjct: 159 TPNRFPSNN 167
>Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical
protein F14F3.1b protein.
Length = 269
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -2
Query: 620 RVQVRGWFLERRSDWYRGSDDRSVSGLYGRNDSLHTRKETIRKEDLRVSGHQLPNRTPAD 441
R+QV WF RR+ W R R+ + SL T + S P +PA
Sbjct: 74 RIQV--WFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPAS 131
Query: 440 TVGSRPSSN 414
T PS+N
Sbjct: 132 TPNRFPSNN 140
>Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical
protein F14F3.1a protein.
Length = 455
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -2
Query: 620 RVQVRGWFLERRSDWYRGSDDRSVSGLYGRNDSLHTRKETIRKEDLRVSGHQLPNRTPAD 441
R+QV WF RR+ W R R+ + SL T + S P +PA
Sbjct: 260 RIQV--WFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPAS 317
Query: 440 TVGSRPSSN 414
T PS+N
Sbjct: 318 TPNRFPSNN 326
>U40797-10|AAK95871.1| 617|Caenorhabditis elegans Gex interacting
protein protein9, isoform a protein.
Length = 617
Score = 28.3 bits (60), Expect = 5.6
Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 9/165 (5%)
Frame = -3
Query: 655 VHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIPY---TLERKQFGKKI 485
V + ++LG + GR+ AA IG+ + + + T R+ +
Sbjct: 280 VTDKNLLGTPGHGSEIASELVGSGRMPFAAATIGMARRALRELSIWCNRTPSRQNDRTTL 339
Query: 484 YEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVK--EAAMAKYFASEIAQTLTSK 311
+ + L ++ A Y + L + G V E ++ ++ Q + S
Sbjct: 340 ADDSRSQRIVTELALKVYALESSLYYLSGLIDEGLSVVVDIENSLLSIMTRDVLQAVISA 399
Query: 310 CIDFMGGVGFTRDFPQEKFYRDAK--IGTIYEGTSNMQ--LQTIA 188
++ +G FP EK +RD + I EG Q L TIA
Sbjct: 400 QLELVGVAASDASFPHEKLFRDVTTLLSIIDEGADVEQIGLATIA 444
>U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-18
protein.
Length = 261
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -2
Query: 620 RVQVRGWFLERRSDWYRGSDDRSVSGLYGRNDSLHTRKETIRKEDLRVSGHQLPNRTPAD 441
R+QV WF RR+ W R R+ + SL T + S P +PA
Sbjct: 66 RIQV--WFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPAS 123
Query: 440 TVGSRPSSN 414
T PS+N
Sbjct: 124 TPNRFPSNN 132
>U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable
abnormal-3 protein.
Length = 455
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -2
Query: 620 RVQVRGWFLERRSDWYRGSDDRSVSGLYGRNDSLHTRKETIRKEDLRVSGHQLPNRTPAD 441
R+QV WF RR+ W R R+ + SL T + S P +PA
Sbjct: 260 RIQV--WFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPAS 317
Query: 440 TVGSRPSSN 414
T PS+N
Sbjct: 318 TPNRFPSNN 326
>U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein.
Length = 296
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -2
Query: 620 RVQVRGWFLERRSDWYRGSDDRSVSGLYGRNDSLHTRKETIRKEDLRVSGHQLPNRTPAD 441
R+QV WF RR+ W R R+ + SL T + S P +PA
Sbjct: 101 RIQV--WFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPAS 158
Query: 440 TVGSRPSSN 414
T PS+N
Sbjct: 159 TPNRFPSNN 167
>U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein.
Length = 284
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -2
Query: 620 RVQVRGWFLERRSDWYRGSDDRSVSGLYGRNDSLHTRKETIRKEDLRVSGHQLPNRTPAD 441
R+QV WF RR+ W R R+ + SL T + S P +PA
Sbjct: 89 RIQV--WFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPAS 146
Query: 440 TVGSRPSSN 414
T PS+N
Sbjct: 147 TPNRFPSNN 155
>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
substrate homologprotein 1 protein.
Length = 1003
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 493 FRIVSFLVCKESLRPYSPDTDRSSEPRYQSDLRSRNQPRTCTLCHILQG 639
F++ + VCKE DR E R Q +R +PR TL + G
Sbjct: 337 FQVDTNEVCKEIYSRLRALADRDLENRKQESIRRPERPRVSTLQSVKPG 385
>AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin receptor
substrate-likeprotein protein.
Length = 1003
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 493 FRIVSFLVCKESLRPYSPDTDRSSEPRYQSDLRSRNQPRTCTLCHILQG 639
F++ + VCKE DR E R Q +R +PR TL + G
Sbjct: 337 FQVDTNEVCKEIYSRLRALADRDLENRKQESIRRPERPRVSTLQSVKPG 385
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -2
Query: 236 WYNLRGYQQHAVTND---CQIIRKGIHTISAFAPNDL*FIFLSFKAYKHL 96
++NLRGY H + +D ++++K IS + N FI ++K K L
Sbjct: 538 FHNLRGYDSHLIFSDGKSSEMLKKEKVNISCISANIEKFISFNYKFEKTL 587
>AF125961-2|AAD14739.1| 343|Caenorhabditis elegans Serpentine
receptor, class j protein15 protein.
Length = 343
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 365 FFNKLVAVFFQSSGVVC 415
FF KLVA FQS+G +C
Sbjct: 121 FFPKLVASIFQSTGCIC 137
>AF036692-8|AAB88329.1| 162|Caenorhabditis elegans Hypothetical
protein C44B12.6 protein.
Length = 162
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +1
Query: 544 PDTDRSSEPRYQSDLRSRNQPRTCTLCHILQGYSIRAPSHCRNVPCMCP 690
P D+SSE L R+ C HIL R P+ V C CP
Sbjct: 64 PSIDKSSEVLPDQPLSERS---ICPYHHILNYDEKRIPAAISEVECSCP 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,531,082
Number of Sequences: 27780
Number of extensions: 343589
Number of successful extensions: 918
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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