Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt13a09
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37436-1|AAA97405.1|  591|Homo sapiens AICAR formyltransferase/I...    83   9e-16
D89976-1|BAA21762.1|  592|Homo sapiens 5-aminoimidazole-4-carbox...    83   9e-16
D82348-1|BAA11559.1|  592|Homo sapiens 5-aminoimidazole-4-carbox...    83   9e-16
BC008879-1|AAH08879.1|  592|Homo sapiens 5-aminoimidazole-4-carb...    83   9e-16
AC073284-1|AAY24062.1|  592|Homo sapiens unknown protein.              83   9e-16
AB062403-1|BAB93490.1|  592|Homo sapiens 5-aminoimidazole-4-carb...    83   9e-16

>U37436-1|AAA97405.1|  591|Homo sapiens AICAR formyltransferase/IMP
           cyclohydrolase bifunctional enzyme protein.
          Length = 591

 Score = 83.0 bits (196), Expect = 9e-16
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = -1

Query: 704 DAFFPFRDNIXRAVQCGVEYIGSPSGSNNDQEVIEACNEHKIALAHTNLRLFHH 543
           DAFFPFRDN+ RA + GV YI +PSGS  D+ VIEAC+E  I LAHTNLRLFHH
Sbjct: 538 DAFFPFRDNVDRAKRSGVAYIAAPSGSAADKVVIEACDELGIILAHTNLRLFHH 591


>D89976-1|BAA21762.1|  592|Homo sapiens
           5-aminoimidazole-4-carboxamide ribonucleotide
           transformylase protein.
          Length = 592

 Score = 83.0 bits (196), Expect = 9e-16
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = -1

Query: 704 DAFFPFRDNIXRAVQCGVEYIGSPSGSNNDQEVIEACNEHKIALAHTNLRLFHH 543
           DAFFPFRDN+ RA + GV YI +PSGS  D+ VIEAC+E  I LAHTNLRLFHH
Sbjct: 539 DAFFPFRDNVDRAKRSGVAYIAAPSGSAADKVVIEACDELGIILAHTNLRLFHH 592


>D82348-1|BAA11559.1|  592|Homo sapiens
           5-aminoimidazole-4-carboxamide-1-beta-D-ribonucl eotide
           transformylase/inosinic protein.
          Length = 592

 Score = 83.0 bits (196), Expect = 9e-16
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = -1

Query: 704 DAFFPFRDNIXRAVQCGVEYIGSPSGSNNDQEVIEACNEHKIALAHTNLRLFHH 543
           DAFFPFRDN+ RA + GV YI +PSGS  D+ VIEAC+E  I LAHTNLRLFHH
Sbjct: 539 DAFFPFRDNVDRAKRSGVAYIAAPSGSAADKVVIEACDELGIILAHTNLRLFHH 592


>BC008879-1|AAH08879.1|  592|Homo sapiens
           5-aminoimidazole-4-carboxamide ribonucleotide
           formyltransferase/IMP cyclohydrol protein.
          Length = 592

 Score = 83.0 bits (196), Expect = 9e-16
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = -1

Query: 704 DAFFPFRDNIXRAVQCGVEYIGSPSGSNNDQEVIEACNEHKIALAHTNLRLFHH 543
           DAFFPFRDN+ RA + GV YI +PSGS  D+ VIEAC+E  I LAHTNLRLFHH
Sbjct: 539 DAFFPFRDNVDRAKRSGVAYIAAPSGSAADKVVIEACDELGIILAHTNLRLFHH 592


>AC073284-1|AAY24062.1|  592|Homo sapiens unknown protein.
          Length = 592

 Score = 83.0 bits (196), Expect = 9e-16
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = -1

Query: 704 DAFFPFRDNIXRAVQCGVEYIGSPSGSNNDQEVIEACNEHKIALAHTNLRLFHH 543
           DAFFPFRDN+ RA + GV YI +PSGS  D+ VIEAC+E  I LAHTNLRLFHH
Sbjct: 539 DAFFPFRDNVDRAKRSGVAYIAAPSGSAADKVVIEACDELGIILAHTNLRLFHH 592


>AB062403-1|BAB93490.1|  592|Homo sapiens
           5-aminoimidazole-4-carboxamide-1-bata-D-ribonucl eotid
           transformylase/inosinica protein.
          Length = 592

 Score = 83.0 bits (196), Expect = 9e-16
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = -1

Query: 704 DAFFPFRDNIXRAVQCGVEYIGSPSGSNNDQEVIEACNEHKIALAHTNLRLFHH 543
           DAFFPFRDN+ RA + GV YI +PSGS  D+ VIEAC+E  I LAHTNLRLFHH
Sbjct: 539 DAFFPFRDNVDRAKRSGVAYIAAPSGSAADKVVIEACDELGIILAHTNLRLFHH 592


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,210,827
Number of Sequences: 237096
Number of extensions: 1445015
Number of successful extensions: 1598
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1598
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)