Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt13a09
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030439-1|ABO52859.1|  590|Drosophila melanogaster LD10347p pro...    87   2e-17
BT011462-1|AAR99120.1|  590|Drosophila melanogaster RE29555p pro...    87   2e-17
AY061157-1|AAL28705.1|  383|Drosophila melanogaster LD12501p pro...    87   2e-17
AE014297-3662|AAF56358.1|  590|Drosophila melanogaster CG11089-P...    87   2e-17

>BT030439-1|ABO52859.1|  590|Drosophila melanogaster LD10347p
           protein.
          Length = 590

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 39/54 (72%), Positives = 42/54 (77%)
 Frame = -1

Query: 704 DAFFPFRDNIXRAVQCGVEYIGSPSGSNNDQEVIEACNEHKIALAHTNLRLFHH 543
           DAFFPFRDNI RA   GV YI SP+GS ND  VI AC+EH I +AHTNLRLFHH
Sbjct: 537 DAFFPFRDNIDRASLSGVSYIASPAGSTNDAGVIAACDEHGIIMAHTNLRLFHH 590


>BT011462-1|AAR99120.1|  590|Drosophila melanogaster RE29555p
           protein.
          Length = 590

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 39/54 (72%), Positives = 42/54 (77%)
 Frame = -1

Query: 704 DAFFPFRDNIXRAVQCGVEYIGSPSGSNNDQEVIEACNEHKIALAHTNLRLFHH 543
           DAFFPFRDNI RA   GV YI SP+GS ND  VI AC+EH I +AHTNLRLFHH
Sbjct: 537 DAFFPFRDNIDRASLSGVSYIASPAGSTNDAGVIAACDEHGIIMAHTNLRLFHH 590


>AY061157-1|AAL28705.1|  383|Drosophila melanogaster LD12501p
           protein.
          Length = 383

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 39/54 (72%), Positives = 42/54 (77%)
 Frame = -1

Query: 704 DAFFPFRDNIXRAVQCGVEYIGSPSGSNNDQEVIEACNEHKIALAHTNLRLFHH 543
           DAFFPFRDNI RA   GV YI SP+GS ND  VI AC+EH I +AHTNLRLFHH
Sbjct: 330 DAFFPFRDNIDRASLSGVSYIASPAGSTNDAGVIAACDEHGIIMAHTNLRLFHH 383


>AE014297-3662|AAF56358.1|  590|Drosophila melanogaster CG11089-PA
           protein.
          Length = 590

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 39/54 (72%), Positives = 42/54 (77%)
 Frame = -1

Query: 704 DAFFPFRDNIXRAVQCGVEYIGSPSGSNNDQEVIEACNEHKIALAHTNLRLFHH 543
           DAFFPFRDNI RA   GV YI SP+GS ND  VI AC+EH I +AHTNLRLFHH
Sbjct: 537 DAFFPFRDNIDRASLSGVSYIASPAGSTNDAGVIAACDEHGIIMAHTNLRLFHH 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,384,939
Number of Sequences: 53049
Number of extensions: 435792
Number of successful extensions: 788
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)