Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12p19
(679 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 22 4.7
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 4.7
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 4.7
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 22 4.7
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 22 4.7
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 22 6.2
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 22 6.2
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 6.2
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 8.2
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 8.2
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 8.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.2
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 527 CLKATLYCTRRRLHAAVYS 583
C AT YC +LH YS
Sbjct: 50 CTYATKYCHSLKLHLRKYS 68
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 259 IREHAEPVHGVAKVTKFRLNH 321
I+ HA+ + + K ++RLNH
Sbjct: 475 IQSHAKAKNTMIKARQYRLNH 495
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 259 IREHAEPVHGVAKVTKFRLNH 321
I+ HA+ + + K ++RLNH
Sbjct: 475 IQSHAKAKNTMIKARQYRLNH 495
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 22.2 bits (45), Expect = 4.7
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -3
Query: 149 RPHMGLSINFYTRTEFYRE*L*SDILNTAEKLVLRNTCINVT 24
R H +S + +++ +FYR+ +++LN + L CI VT
Sbjct: 34 RYHQQISGDRFSK-DFYRQDTKNNLLNAYVRFKLVTDCIFVT 74
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 22.2 bits (45), Expect = 4.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 259 IREHAEPVHGVAKVTKFRLNH 321
I+ HA+ + + K ++RLNH
Sbjct: 101 IQSHAKAKNTMIKARQYRLNH 121
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 21.8 bits (44), Expect = 6.2
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +2
Query: 92 ILYKI---QSLCKNLLKAPYEVSRSNTSCRT 175
+LY + Q LC L+ PY + NT T
Sbjct: 10 LLYSVAMSQRLCIQLVVGPYVIGLMNTMTHT 40
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 21.8 bits (44), Expect = 6.2
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +2
Query: 92 ILYKI---QSLCKNLLKAPYEVSRSNTSCRT 175
+LY + Q LC L+ PY + NT T
Sbjct: 9 LLYSVAMSQRLCIQLVVGPYVIGLMNTMTHT 39
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 6.2
Identities = 14/61 (22%), Positives = 25/61 (40%)
Frame = +2
Query: 350 LSIRVINNDTISAMYLLVFPLSSLMRFGLFSLIRSKAAGQSNLYLATKASILGNSSACTC 529
L + + + T ++ L FP +++ LIR + G A +G S CT
Sbjct: 159 LRVALTSELTAASTVLGFFPALNIVADSFIELIRRQRVGYKVTGFEELAYKMGLESTCTL 218
Query: 530 L 532
+
Sbjct: 219 I 219
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 106 NFIENNFNQIY*ILLKNLYY 47
N+ NN+ ++Y K LYY
Sbjct: 90 NYNNNNYKKLYCNNYKKLYY 109
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 106 NFIENNFNQIY*ILLKNLYY 47
N+ NN+ ++Y K LYY
Sbjct: 90 NYNNNNYKKLYCNNYKKLYY 109
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 8.2
Identities = 5/19 (26%), Positives = 14/19 (73%)
Frame = -3
Query: 668 MITWLSSMLSSVPFSTWRR 612
+ WL +++S++PF+ + +
Sbjct: 163 LAAWLIALISAIPFAIYTK 181
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 106 NFIENNFNQIY*ILLKNLYY 47
N+ NN+N Y K LYY
Sbjct: 337 NYNNNNYNNNYNNNCKKLYY 356
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,130
Number of Sequences: 438
Number of extensions: 4126
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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