Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12p13
(724 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK074102-1|BAB84928.1| 1269|Homo sapiens FLJ00173 protein protein. 34 0.45
BC018935-1|AAH18935.2| 689|Homo sapiens bin3, bicoid-interactin... 33 0.78
BC000556-1|AAH00556.2| 689|Homo sapiens bin3, bicoid-interactin... 33 0.78
AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1... 32 1.8
AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein pr... 32 1.8
AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein pr... 32 1.8
AL133649-1|CAB63768.1| 392|Homo sapiens hypothetical protein pr... 32 1.8
AJ271791-1|CAC20424.1| 1800|Homo sapiens retinoid-acid induced p... 32 1.8
AJ271790-1|CAC20423.1| 1862|Homo sapiens retinoid-acid induced p... 32 1.8
BC110585-1|AAI10586.1| 975|Homo sapiens ring finger protein 20 ... 32 2.4
BC110584-1|AAI10585.1| 975|Homo sapiens ring finger protein 20 ... 32 2.4
BC050431-1|AAH50431.1| 470|Homo sapiens MEIS2 protein protein. 32 2.4
AY349358-1|AAQ56722.1| 173|Homo sapiens unknown protein. 32 2.4
AL591377-3|CAH69963.1| 977|Homo sapiens ring finger protein 20 ... 32 2.4
AL353621-9|CAI14618.1| 977|Homo sapiens ring finger protein 20 ... 32 2.4
AK022532-1|BAB14081.1| 975|Homo sapiens protein ( Homo sapiens ... 32 2.4
AK022300-1|BAB14005.1| 746|Homo sapiens protein ( Homo sapiens ... 32 2.4
AK002051-1|BAA92057.1| 333|Homo sapiens protein ( Homo sapiens ... 32 2.4
AK001298-1|BAA91608.1| 166|Homo sapiens protein ( Homo sapiens ... 32 2.4
AF265230-1|AAK58539.1| 975|Homo sapiens RING finger protein 20 ... 32 2.4
AF179898-1|AAF81641.1| 470|Homo sapiens TALE homeobox protein M... 32 2.4
AF179897-1|AAF81640.1| 477|Homo sapiens TALE homeobox protein M... 32 2.4
BC091484-1|AAH91484.1| 621|Homo sapiens FBXL4 protein protein. 31 3.2
BC055010-1|AAH55010.1| 621|Homo sapiens F-box and leucine-rich ... 31 3.2
BC019061-1|AAH19061.1| 240|Homo sapiens IAH1 protein protein. 31 3.2
AL022395-1|CAB37981.1| 621|Homo sapiens F-box and leucine-rich ... 31 3.2
AF199355-1|AAF09247.1| 621|Homo sapiens F-box protein FBL5 prot... 31 3.2
AF176699-1|AAF03699.1| 621|Homo sapiens F-box protein FBL4 prot... 31 3.2
AF174590-1|AAF04511.1| 621|Homo sapiens F-box protein Fbl4 prot... 31 3.2
BC053362-1|AAH53362.1| 818|Homo sapiens UNK protein protein. 31 5.5
AB051540-1|BAB21844.1| 818|Homo sapiens KIAA1753 protein protein. 31 5.5
BC041803-1|AAH41803.1| 177|Homo sapiens ARL17P1 protein protein. 30 7.3
BC030570-1|AAH30570.1| 160|Homo sapiens ADP-ribosylation factor... 30 7.3
AJ311904-1|CAC84565.1| 1207|Homo sapiens ADAMTS-19 protein. 30 7.3
AF045458-1|AAC32326.1| 1050|Homo sapiens serine/threonine kinase... 30 7.3
AB209344-1|BAD92581.1| 179|Homo sapiens ADP-ribosylation factor... 30 7.3
AB018265-1|BAA34442.2| 1066|Homo sapiens KIAA0722 protein protein. 30 7.3
AK125501-1|BAC86183.1| 153|Homo sapiens protein ( Homo sapiens ... 30 9.6
AB208907-1|BAD92144.1| 248|Homo sapiens Hypothetical protein FL... 30 9.6
>AK074102-1|BAB84928.1| 1269|Homo sapiens FLJ00173 protein protein.
Length = 1269
Score = 34.3 bits (75), Expect = 0.45
Identities = 30/76 (39%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +3
Query: 315 DVLRHGEPAPGLEEYLGGLVPRPQGQHPVRAAVQVHLGLRPHGLQELGDVL-MQTAQVAP 491
DV R PAPGL PRP P AA++ G PH LQ G L A + P
Sbjct: 1126 DVKRRQAPAPGL--------PRPARPAPAGAALRPRRGAGPH-LQPPGRGLPAAPALLFP 1176
Query: 492 GHAPPHRDPVRYEISH 539
G A P R P R H
Sbjct: 1177 GAAVPGRRPRRRAAGH 1192
>BC018935-1|AAH18935.2| 689|Homo sapiens bin3, bicoid-interacting
3, homolog (Drosophila) protein.
Length = 689
Score = 33.5 bits (73), Expect = 0.78
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Frame = -2
Query: 513 RGVEERGPGQLAQSASG-----RRQVPAVHAVAGRGAPVQRHARGAG--LEDGAPAHRDI 355
RG ERGPG+ A SA R+ P A + G Q+H RG G + A
Sbjct: 44 RGGTERGPGRCAPSAGSPAAAVGRESPGAAATSSSGPQAQQH-RGGGPQAQSHGEARLSD 102
Query: 354 PQGRAQVP 331
P GRA P
Sbjct: 103 PPGRAAPP 110
>BC000556-1|AAH00556.2| 689|Homo sapiens bin3, bicoid-interacting
3, homolog (Drosophila) protein.
Length = 689
Score = 33.5 bits (73), Expect = 0.78
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Frame = -2
Query: 513 RGVEERGPGQLAQSASG-----RRQVPAVHAVAGRGAPVQRHARGAG--LEDGAPAHRDI 355
RG ERGPG+ A SA R+ P A + G Q+H RG G + A
Sbjct: 44 RGGTERGPGRCAPSAGSPAAAVGRESPGAAATSSSGPQAQQH-RGGGPQAQSHGEARLSD 102
Query: 354 PQGRAQVP 331
P GRA P
Sbjct: 103 PPGRAAPP 110
>AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1
protein.
Length = 1906
Score = 32.3 bits (70), Expect = 1.8
Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 422 PRPATAWTAGTWRRPD--ADCASCPGPRSSTPRSCSIRNQSLSCFDRRSNGCSE 577
P A A TAG RPD AD A GP ++ R S R QS C D R +G E
Sbjct: 1743 PECAAAATAGKPPRPDGPADPAK-QGPLRTSARGLSRRLQSCYCCDGREDGGEE 1795
>AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein
protein.
Length = 568
Score = 32.3 bits (70), Expect = 1.8
Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 422 PRPATAWTAGTWRRPD--ADCASCPGPRSSTPRSCSIRNQSLSCFDRRSNGCSE 577
P A A TAG RPD AD A GP ++ R S R QS C D R +G E
Sbjct: 405 PECAAAATAGKPPRPDGPADPAK-QGPLRTSARGLSRRLQSCYCCDGREDGGEE 457
>AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein
protein.
Length = 1285
Score = 32.3 bits (70), Expect = 1.8
Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 422 PRPATAWTAGTWRRPD--ADCASCPGPRSSTPRSCSIRNQSLSCFDRRSNGCSE 577
P A A TAG RPD AD A GP ++ R S R QS C D R +G E
Sbjct: 1122 PECAAAATAGKPPRPDGPADPAK-QGPLRTSARGLSRRLQSCYCCDGREDGGEE 1174
>AL133649-1|CAB63768.1| 392|Homo sapiens hypothetical protein
protein.
Length = 392
Score = 32.3 bits (70), Expect = 1.8
Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 422 PRPATAWTAGTWRRPD--ADCASCPGPRSSTPRSCSIRNQSLSCFDRRSNGCSE 577
P A A TAG RPD AD A GP ++ R S R QS C D R +G E
Sbjct: 229 PECAAAATAGKPPRPDGPADPAK-QGPLRTSARGLSRRLQSCYCCDGREDGGEE 281
>AJ271791-1|CAC20424.1| 1800|Homo sapiens retinoid-acid induced
protein 1 protein.
Length = 1800
Score = 32.3 bits (70), Expect = 1.8
Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 422 PRPATAWTAGTWRRPD--ADCASCPGPRSSTPRSCSIRNQSLSCFDRRSNGCSE 577
P A A TAG RPD AD A GP ++ R S R QS C D R +G E
Sbjct: 1632 PECAAAATAGKPPRPDGPADPAK-QGPLRTSARGLSRRLQSCYCCDGREDGGEE 1684
>AJ271790-1|CAC20423.1| 1862|Homo sapiens retinoid-acid induced
protein 1 protein.
Length = 1862
Score = 32.3 bits (70), Expect = 1.8
Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 422 PRPATAWTAGTWRRPD--ADCASCPGPRSSTPRSCSIRNQSLSCFDRRSNGCSE 577
P A A TAG RPD AD A GP ++ R S R QS C D R +G E
Sbjct: 1631 PECAAAATAGKPPRPDGPADPAK-QGPLRTSARGLSRRLQSCYCCDGREDGGEE 1683
>BC110585-1|AAI10586.1| 975|Homo sapiens ring finger protein 20
protein.
Length = 975
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 722 NFNHMXDAKTRHDAE-KLXSDDVRMNKRLHELLKHDKFSFADQSLT 588
N M + + DA KL S+ ++ N+ +H+LLK +K ADQ LT
Sbjct: 746 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 790
>BC110584-1|AAI10585.1| 975|Homo sapiens ring finger protein 20
protein.
Length = 975
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 722 NFNHMXDAKTRHDAE-KLXSDDVRMNKRLHELLKHDKFSFADQSLT 588
N M + + DA KL S+ ++ N+ +H+LLK +K ADQ LT
Sbjct: 746 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 790
>BC050431-1|AAH50431.1| 470|Homo sapiens MEIS2 protein protein.
Length = 470
Score = 31.9 bits (69), Expect = 2.4
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +3
Query: 366 GLVPRPQGQHPVRAAV---QVHLGLRPHGLQEL-GDVLMQ-----TAQVAPGHAPPHRDP 518
G P+GQ P+ + V Q H+G+RP GLQ + GD + Q + P + PP P
Sbjct: 349 GAAYSPEGQ-PMGSFVLDGQQHMGIRPAGLQSMPGDYVSQGGPMGMSMAQPSYTPPQMTP 407
Query: 519 VRYEISH 539
++ H
Sbjct: 408 HPTQLRH 414
>AY349358-1|AAQ56722.1| 173|Homo sapiens unknown protein.
Length = 173
Score = 31.9 bits (69), Expect = 2.4
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +3
Query: 366 GLVPRPQGQHPVRAAV---QVHLGLRPHGLQEL-GDVLMQ-----TAQVAPGHAPPHRDP 518
G P+GQ P+ + V Q H+G+RP GLQ + GD + Q + P + PP P
Sbjct: 52 GAAYSPEGQ-PMGSFVLDGQQHMGIRPAGLQSMPGDYVSQGGPMGMSMAQPSYTPPQMTP 110
Query: 519 VRYEISH 539
++ H
Sbjct: 111 HPTQLRH 117
>AL591377-3|CAH69963.1| 977|Homo sapiens ring finger protein 20
protein.
Length = 977
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 722 NFNHMXDAKTRHDAE-KLXSDDVRMNKRLHELLKHDKFSFADQSLT 588
N M + + DA KL S+ ++ N+ +H+LLK +K ADQ LT
Sbjct: 748 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 792
>AL353621-9|CAI14618.1| 977|Homo sapiens ring finger protein 20
protein.
Length = 977
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 722 NFNHMXDAKTRHDAE-KLXSDDVRMNKRLHELLKHDKFSFADQSLT 588
N M + + DA KL S+ ++ N+ +H+LLK +K ADQ LT
Sbjct: 748 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 792
>AK022532-1|BAB14081.1| 975|Homo sapiens protein ( Homo sapiens
cDNA FLJ12470 fis, clone NT2RM1000885, weakly similar to
HYPOTHETICAL 97.1 KD PROTEIN R05D3.4 IN CHROMOSOME III.
).
Length = 975
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 722 NFNHMXDAKTRHDAE-KLXSDDVRMNKRLHELLKHDKFSFADQSLT 588
N M + + DA KL S+ ++ N+ +H+LLK +K ADQ LT
Sbjct: 746 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 790
>AK022300-1|BAB14005.1| 746|Homo sapiens protein ( Homo sapiens
cDNA FLJ12238 fis, clone MAMMA1001260, weakly similar to
HYPOTHETICAL 97.1 KD PROTEIN R05D3.4 IN CHROMOSOME III.
).
Length = 746
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 722 NFNHMXDAKTRHDAE-KLXSDDVRMNKRLHELLKHDKFSFADQSLT 588
N M + + DA KL S+ ++ N+ +H+LLK +K ADQ LT
Sbjct: 517 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 561
>AK002051-1|BAA92057.1| 333|Homo sapiens protein ( Homo sapiens
cDNA FLJ11189 fis, clone PLACE1007547. ).
Length = 333
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 722 NFNHMXDAKTRHDAE-KLXSDDVRMNKRLHELLKHDKFSFADQSLT 588
N M + + DA KL S+ ++ N+ +H+LLK +K ADQ LT
Sbjct: 104 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 148
>AK001298-1|BAA91608.1| 166|Homo sapiens protein ( Homo sapiens
cDNA FLJ10436 fis, clone NT2RP1000574, highly similar to
HOMEOBOX PROTEIN MEIS2. ).
Length = 166
Score = 31.9 bits (69), Expect = 2.4
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +3
Query: 366 GLVPRPQGQHPVRAAV---QVHLGLRPHGLQEL-GDVLMQ-----TAQVAPGHAPPHRDP 518
G P+GQ P+ + V Q H+G+RP GLQ + GD + Q + P + PP P
Sbjct: 45 GAAYSPEGQ-PMGSFVLDGQQHMGIRPAGLQSMPGDYVSQGGPMGMSMAQPSYTPPQMTP 103
Query: 519 VRYEISH 539
++ H
Sbjct: 104 HPTQLRH 110
>AF265230-1|AAK58539.1| 975|Homo sapiens RING finger protein 20
protein.
Length = 975
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 722 NFNHMXDAKTRHDAE-KLXSDDVRMNKRLHELLKHDKFSFADQSLT 588
N M + + DA KL S+ ++ N+ +H+LLK +K ADQ LT
Sbjct: 746 NIRLMQQLREKDDANFKLMSERIKSNQ-IHKLLKEEKEELADQVLT 790
>AF179898-1|AAF81641.1| 470|Homo sapiens TALE homeobox protein
Meis2d protein.
Length = 470
Score = 31.9 bits (69), Expect = 2.4
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +3
Query: 366 GLVPRPQGQHPVRAAV---QVHLGLRPHGLQEL-GDVLMQ-----TAQVAPGHAPPHRDP 518
G P+GQ P+ + V Q H+G+RP GLQ + GD + Q + P + PP P
Sbjct: 349 GAAYSPEGQ-PMGSFVLDGQQHMGIRPAGLQSMPGDYVSQGGPMGMSMAQPSYTPPQMTP 407
Query: 519 VRYEISH 539
++ H
Sbjct: 408 HPTQLRH 414
>AF179897-1|AAF81640.1| 477|Homo sapiens TALE homeobox protein
Meis2c protein.
Length = 477
Score = 31.9 bits (69), Expect = 2.4
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +3
Query: 366 GLVPRPQGQHPVRAAV---QVHLGLRPHGLQEL-GDVLMQ-----TAQVAPGHAPPHRDP 518
G P+GQ P+ + V Q H+G+RP GLQ + GD + Q + P + PP P
Sbjct: 356 GAAYSPEGQ-PMGSFVLDGQQHMGIRPAGLQSMPGDYVSQGGPMGMSMAQPSYTPPQMTP 414
Query: 519 VRYEISH 539
++ H
Sbjct: 415 HPTQLRH 421
>BC091484-1|AAH91484.1| 621|Homo sapiens FBXL4 protein protein.
Length = 621
Score = 31.5 bits (68), Expect = 3.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 343 PALRNISVGWCPVLKASTPC 402
P L + +GWCP L++ST C
Sbjct: 505 PLLEELDLGWCPTLQSSTGC 524
>BC055010-1|AAH55010.1| 621|Homo sapiens F-box and leucine-rich
repeat protein 4 protein.
Length = 621
Score = 31.5 bits (68), Expect = 3.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 343 PALRNISVGWCPVLKASTPC 402
P L + +GWCP L++ST C
Sbjct: 505 PLLEELDLGWCPTLQSSTGC 524
>BC019061-1|AAH19061.1| 240|Homo sapiens IAH1 protein protein.
Length = 240
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 422 PRPATAWTAGTWRRPDADCA--SCPGPRSSTPRSCSIRNQSLSCFDRR 559
PRPA W R C+ +C + +PR C + N+ S ++ R
Sbjct: 5 PRPAAPWRCARPRAAGVPCSGLACCSSGTPSPRKCDVLNRGFSGYNTR 52
>AL022395-1|CAB37981.1| 621|Homo sapiens F-box and leucine-rich
repeat protein 4 protein.
Length = 621
Score = 31.5 bits (68), Expect = 3.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 343 PALRNISVGWCPVLKASTPC 402
P L + +GWCP L++ST C
Sbjct: 505 PLLEELDLGWCPTLQSSTGC 524
>AF199355-1|AAF09247.1| 621|Homo sapiens F-box protein FBL5
protein.
Length = 621
Score = 31.5 bits (68), Expect = 3.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 343 PALRNISVGWCPVLKASTPC 402
P L + +GWCP L++ST C
Sbjct: 505 PLLEELDLGWCPTLQSSTGC 524
>AF176699-1|AAF03699.1| 621|Homo sapiens F-box protein FBL4
protein.
Length = 621
Score = 31.5 bits (68), Expect = 3.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 343 PALRNISVGWCPVLKASTPC 402
P L + +GWCP L++ST C
Sbjct: 505 PLLEELDLGWCPTLQSSTGC 524
>AF174590-1|AAF04511.1| 621|Homo sapiens F-box protein Fbl4
protein.
Length = 621
Score = 31.5 bits (68), Expect = 3.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 343 PALRNISVGWCPVLKASTPC 402
P L + +GWCP L++ST C
Sbjct: 505 PLLEELDLGWCPTLQSSTGC 524
>BC053362-1|AAH53362.1| 818|Homo sapiens UNK protein protein.
Length = 818
Score = 30.7 bits (66), Expect = 5.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 207 RLRKHSLAPRAEEKPQLRESGQRLGVL 127
+L+ HSL PR++E+P L+ LG+L
Sbjct: 445 KLKPHSLEPRSQEQPLLQPKQDMLGIL 471
>AB051540-1|BAB21844.1| 818|Homo sapiens KIAA1753 protein protein.
Length = 818
Score = 30.7 bits (66), Expect = 5.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 207 RLRKHSLAPRAEEKPQLRESGQRLGVL 127
+L+ HSL PR++E+P L+ LG+L
Sbjct: 445 KLKPHSLEPRSQEQPLLQPKQDMLGIL 471
>BC041803-1|AAH41803.1| 177|Homo sapiens ARL17P1 protein protein.
Length = 177
Score = 30.3 bits (65), Expect = 7.3
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = -3
Query: 545 MRVTDFVSNRIAVWRSVARGNLRSLHQDVAKFLQSMRSQAEVHLYSGTHGVLALRTGHQP 366
+ ++ +N AVW + +R L Q + + RS H S GVL ++ H
Sbjct: 53 VETVEYKNNTFAVWDVGSHFKIRPLWQHFFQNTKGARSPGSTHQGSLASGVLPIKCSHVE 112
Query: 365 TEIFLKAGRRFP 330
++ K GR P
Sbjct: 113 FGMW-KGGRSHP 123
>BC030570-1|AAH30570.1| 160|Homo sapiens ADP-ribosylation
factor-like 17 protein.
Length = 160
Score = 30.3 bits (65), Expect = 7.3
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = -3
Query: 545 MRVTDFVSNRIAVWRSVARGNLRSLHQDVAKFLQSMRSQAEVHLYSGTHGVLALRTGHQP 366
+ ++ +N AVW + +R L Q + + RS H S GVL ++ H
Sbjct: 36 VETVEYKNNTFAVWDVGSHFKIRPLWQHFFQNTKGARSPGSTHQGSLASGVLPIKCSHVE 95
Query: 365 TEIFLKAGRRFP 330
++ K GR P
Sbjct: 96 FGMW-KGGRSHP 106
>AJ311904-1|CAC84565.1| 1207|Homo sapiens ADAMTS-19 protein.
Length = 1207
Score = 30.3 bits (65), Expect = 7.3
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 419 APRPATAWTAGTWRRPDADCASCPGPRSSTPRSCSIRNQSLSCFD 553
AP P WT +W DA C G R +T I ++++S D
Sbjct: 912 APEPLFMWTHTSWEDCDATCGG--GERKTTVSCTKIMSKNISIVD 954
>AF045458-1|AAC32326.1| 1050|Homo sapiens serine/threonine kinase
ULK1 protein.
Length = 1050
Score = 30.3 bits (65), Expect = 7.3
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +3
Query: 330 GEPAPGLEEYLGGLVPRPQGQHPVRAAVQVHLGLRPHGLQELGDVLMQTAQVAPGHAPPH 509
G P+P E GG PRP P + LG R H L D+ + V P P
Sbjct: 519 GTPSPQGAEMRGGRSPRPGSSAPEHSPRTSGLGCRLHSAPNLSDLHV----VRPKLPKPP 574
Query: 510 RDPV 521
DP+
Sbjct: 575 TDPL 578
>AB209344-1|BAD92581.1| 179|Homo sapiens ADP-ribosylation factor 7
variant protein.
Length = 179
Score = 30.3 bits (65), Expect = 7.3
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = -3
Query: 545 MRVTDFVSNRIAVWRSVARGNLRSLHQDVAKFLQSMRSQAEVHLYSGTHGVLALRTGHQP 366
+ ++ +N AVW + +R L Q + + RS H S GVL ++ H
Sbjct: 55 VETVEYKNNTFAVWDVGSHFKIRPLWQHFFQNTKGARSPGSTHQGSLASGVLPIKCSHVE 114
Query: 365 TEIFLKAGRRFP 330
++ K GR P
Sbjct: 115 FGMW-KGGRSHP 125
>AB018265-1|BAA34442.2| 1066|Homo sapiens KIAA0722 protein protein.
Length = 1066
Score = 30.3 bits (65), Expect = 7.3
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +3
Query: 330 GEPAPGLEEYLGGLVPRPQGQHPVRAAVQVHLGLRPHGLQELGDVLMQTAQVAPGHAPPH 509
G P+P E GG PRP P + LG R H L D+ + V P P
Sbjct: 535 GTPSPQGAEMRGGRSPRPGSSAPEHSPRTSGLGCRLHSAPNLSDLHV----VRPKLPKPP 590
Query: 510 RDPV 521
DP+
Sbjct: 591 TDPL 594
>AK125501-1|BAC86183.1| 153|Homo sapiens protein ( Homo sapiens
cDNA FLJ43512 fis, clone PERIC2004028, moderately
similar to Mus musculus erythroblast macrophage protein
EMP mRNA. ).
Length = 153
Score = 29.9 bits (64), Expect = 9.6
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2
Query: 510 GVEERGPGQLAQSASGRRQVPAVHAVAGRGAPVQRHARGAGL 385
G RG GQ Q+ + R + AV GRGA + R A G GL
Sbjct: 66 GYNVRGAGQGGQAGTHRHRDRAVWDGQGRGARLARIAIGTGL 107
>AB208907-1|BAD92144.1| 248|Homo sapiens Hypothetical protein
FLJ43512 variant protein.
Length = 248
Score = 29.9 bits (64), Expect = 9.6
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2
Query: 510 GVEERGPGQLAQSASGRRQVPAVHAVAGRGAPVQRHARGAGL 385
G RG GQ Q+ + R + AV GRGA + R A G GL
Sbjct: 161 GYNVRGAGQGGQAGTHRHRDRAVWDGQGRGARLARIAIGTGL 202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,963,068
Number of Sequences: 237096
Number of extensions: 2284563
Number of successful extensions: 8387
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 7638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8384
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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