Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12p12
(702 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020892-1|AAH20892.2| 241|Homo sapiens C10orf78 protein protein. 36 0.14
AL357336-2|CAI40456.1| 232|Homo sapiens novel protein protein. 36 0.14
AL357336-1|CAI40454.1| 245|Homo sapiens novel protein protein. 36 0.14
DQ650792-1|ABG43103.1| 278|Homo sapiens 3'-5' exonuclease TREX2... 35 0.24
DQ145722-1|AAZ38719.1| 236|Homo sapiens three prime repair exon... 35 0.24
CR533556-1|CAG38587.1| 789|Homo sapiens TAX1BP1 protein. 35 0.24
CR457056-1|CAG33337.1| 747|Homo sapiens TAX1BP1 protein. 35 0.24
BC050358-1|AAH50358.1| 789|Homo sapiens Tax1 (human T-cell leuk... 35 0.24
AF319573-1|AAK07620.1| 236|Homo sapiens 3'-5' exonuclease TREX2... 35 0.24
AF319572-1|AAK07619.1| 279|Homo sapiens 3'-5' exonuclease TREX2... 35 0.24
AF319571-1|AAK07618.1| 279|Homo sapiens 3'-5' exonuclease TREX2... 35 0.24
AF319570-1|AAK07617.1| 236|Homo sapiens 3'-5' exonuclease TREX2... 35 0.24
AF268075-1|AAG03025.1| 747|Homo sapiens TRAF6-binding protein T... 35 0.24
AF151107-1|AAD48776.1| 236|Homo sapiens 3'-5' exonuclease TREX2... 35 0.24
AF090891-1|AAF24016.1| 747|Homo sapiens PRO0105 protein. 35 0.24
U33821-1|AAA75595.2| 747|Homo sapiens tax1-binding protein TXBP... 35 0.32
AC004549-1|AAC13359.2| 596|Homo sapiens unknown protein. 34 0.43
AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350... 33 1.3
AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350... 33 1.3
AL390718-4|CAI14836.1| 581|Homo sapiens centrosomal protein 350... 33 1.3
AL390718-2|CAI14834.1| 1291|Homo sapiens centrosomal protein 350... 33 1.3
AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350... 33 1.3
AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated p... 33 1.3
AB007949-1|BAA32325.2| 1288|Homo sapiens KIAA0480 protein protein. 33 1.3
Z15017-1|CAA78737.1| 261|Homo sapiens glycoprotein 39 protein. 32 1.7
X68550-1|CAA48554.1| 261|Homo sapiens TRAP protein. 32 1.7
X67878-1|CAA48077.1| 261|Homo sapiens CD40 ligand protein. 32 1.7
L07414-1|AAA35662.1| 261|Homo sapiens CD40 surface protein prot... 32 1.7
EF064753-1|ABK41936.1| 261|Homo sapiens CD40 ligand (TNF superf... 32 1.7
D31797-1|BAA06599.1| 261|Homo sapiens CD40 ligand protein. 32 1.7
CR457119-1|CAG33400.1| 304|Homo sapiens TREX1 protein. 32 1.7
BT020053-1|AAV38856.1| 304|Homo sapiens three prime repair exon... 32 1.7
BT020052-1|AAV38855.1| 304|Homo sapiens three prime repair exon... 32 1.7
BC074950-1|AAH74950.1| 261|Homo sapiens CD40 ligand (TNF superf... 32 1.7
BC071754-1|AAH71754.1| 261|Homo sapiens CD40 ligand (TNF superf... 32 1.7
BC023630-1|AAH23630.1| 369|Homo sapiens three prime repair exon... 32 1.7
AY197739-1|AAP37943.1| 240|Homo sapiens CD154 protein protein. 32 1.7
AL135783-4|CAI42902.1| 240|Homo sapiens CD40 ligand (TNF superf... 32 1.7
AL135783-3|CAI42901.1| 261|Homo sapiens CD40 ligand (TNF superf... 32 1.7
AJ243797-1|CAB50866.1| 304|Homo sapiens deoxyribonuclease III (... 32 1.7
AF483777-1|AAL82504.1| 304|Homo sapiens three prime repair exon... 32 1.7
AF319569-1|AAK07616.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 32 1.7
AF319568-1|AAK07615.1| 369|Homo sapiens 3'-5' exonuclease TREX1... 32 1.7
AF319567-1|AAK07614.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 32 1.7
AF319566-1|AAK07613.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 32 1.7
AF151105-1|AAD48774.2| 314|Homo sapiens 3'-5' exonuclease TREX1... 32 1.7
D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein prot... 30 7.0
BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain cont... 30 7.0
BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein. 30 7.0
AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein. 30 7.0
AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein. 30 7.0
AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein. 30 7.0
AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein. 30 7.0
AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein... 30 7.0
BC005364-1|AAH05364.1| 342|Homo sapiens chromosome 10 open read... 30 9.2
AL365185-2|CAH73629.1| 342|Homo sapiens chromosome 10 open read... 30 9.2
AL365185-1|CAH73628.1| 315|Homo sapiens chromosome 10 open read... 30 9.2
AL353149-2|CAH70341.1| 342|Homo sapiens chromosome 10 open read... 30 9.2
AL353149-1|CAH70340.1| 315|Homo sapiens chromosome 10 open read... 30 9.2
AL139406-2|CAH73712.1| 342|Homo sapiens chromosome 10 open read... 30 9.2
AL139406-1|CAH73711.1| 315|Homo sapiens chromosome 10 open read... 30 9.2
AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase D... 30 9.2
AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase ... 30 9.2
AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens ... 30 9.2
AK125848-1|BAC86317.1| 1318|Homo sapiens protein ( Homo sapiens ... 30 9.2
AK002080-1|BAA92073.1| 315|Homo sapiens protein ( Homo sapiens ... 30 9.2
AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase D... 30 9.2
>BC020892-1|AAH20892.2| 241|Homo sapiens C10orf78 protein protein.
Length = 241
Score = 35.9 bits (79), Expect = 0.14
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = -3
Query: 532 STENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQ 353
S EN + AS +++ C++ ++S K D ++ TNLK KN N + QSL
Sbjct: 72 SEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLN--VCESQSLDSG 129
Query: 352 NKSTKKREFTLTGLYKRLLDKD 287
+ S + EF L K+ L+ +
Sbjct: 130 SCSALQNEFVSEKLPKQRLNAE 151
>AL357336-2|CAI40456.1| 232|Homo sapiens novel protein protein.
Length = 232
Score = 35.9 bits (79), Expect = 0.14
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = -3
Query: 532 STENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQ 353
S EN + AS +++ C++ ++S K D ++ TNLK KN N + QSL
Sbjct: 63 SEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLN--VCESQSLDSG 120
Query: 352 NKSTKKREFTLTGLYKRLLDKD 287
+ S + EF L K+ L+ +
Sbjct: 121 SCSALQNEFVSEKLPKQRLNAE 142
>AL357336-1|CAI40454.1| 245|Homo sapiens novel protein protein.
Length = 245
Score = 35.9 bits (79), Expect = 0.14
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = -3
Query: 532 STENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQ 353
S EN + AS +++ C++ ++S K D ++ TNLK KN N + QSL
Sbjct: 76 SEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLN--VCESQSLDSG 133
Query: 352 NKSTKKREFTLTGLYKRLLDKD 287
+ S + EF L K+ L+ +
Sbjct: 134 SCSALQNEFVSEKLPKQRLNAE 155
>DQ650792-1|ABG43103.1| 278|Homo sapiens 3'-5' exonuclease TREX2
long form protein.
Length = 278
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = -3
Query: 373 DQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADE 194
D++ S ++ ++ ++L L+ R + AH AE D L+ L E L WADE
Sbjct: 197 DRAHSHGTRARGRQGYSLGSLFHRYFRAEPSAAHSAEGDVHTLLLIFLHRAAELLAWADE 256
Query: 193 SCKTIHQIKPL 161
+ I+P+
Sbjct: 257 QARGWAHIEPM 267
>DQ145722-1|AAZ38719.1| 236|Homo sapiens three prime repair
exonuclease 2 protein.
Length = 236
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = -3
Query: 373 DQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADE 194
D++ S ++ ++ ++L L+ R + AH AE D L+ L E L WADE
Sbjct: 155 DRAHSHGTRARGRQGYSLGSLFHRYFRAEPSAAHSAEGDVHTLLLIFLHRAAELLAWADE 214
Query: 193 SCKTIHQIKPL 161
+ I+P+
Sbjct: 215 QARGWAHIEPM 225
>CR533556-1|CAG38587.1| 789|Homo sapiens TAX1BP1 protein.
Length = 789
Score = 35.1 bits (77), Expect = 0.24
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Frame = -3
Query: 556 LLWPELDVSTENWEEIDNLCASFSKDTC-IDDEKSKKENDLNQQK--CTNLKKGRKNKND 386
LL +++ + + EE+ L A K+T + ++ + E +LN +K C L+ +K +
Sbjct: 149 LLELKIEKTMKEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQKGLTE 208
Query: 385 LTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVN-AHRA 266
+T QSL ++N+ KKR F+ L++D V+ H+A
Sbjct: 209 VT---QSLKMENEEFKKR-FSDATSKAHQLEEDIVSVTHKA 245
>CR457056-1|CAG33337.1| 747|Homo sapiens TAX1BP1 protein.
Length = 747
Score = 35.1 bits (77), Expect = 0.24
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Frame = -3
Query: 556 LLWPELDVSTENWEEIDNLCASFSKDTC-IDDEKSKKENDLNQQK--CTNLKKGRKNKND 386
LL +++ + + EE+ L A K+T + ++ + E +LN +K C L+ +K +
Sbjct: 149 LLELKIEKTMKEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQKGLTE 208
Query: 385 LTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVN-AHRA 266
+T QSL ++N+ KKR F+ L++D V+ H+A
Sbjct: 209 VT---QSLKMENEEFKKR-FSDATSKAHQLEEDIVSVTHKA 245
>BC050358-1|AAH50358.1| 789|Homo sapiens Tax1 (human T-cell
leukemia virus type I) binding protein 1 protein.
Length = 789
Score = 35.1 bits (77), Expect = 0.24
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Frame = -3
Query: 556 LLWPELDVSTENWEEIDNLCASFSKDTC-IDDEKSKKENDLNQQK--CTNLKKGRKNKND 386
LL +++ + + EE+ L A K+T + ++ + E +LN +K C L+ +K +
Sbjct: 149 LLELKIEKTMKEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQKGLTE 208
Query: 385 LTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVN-AHRA 266
+T QSL ++N+ KKR F+ L++D V+ H+A
Sbjct: 209 VT---QSLKMENEEFKKR-FSDATSKAHQLEEDIVSVTHKA 245
>AF319573-1|AAK07620.1| 236|Homo sapiens 3'-5' exonuclease TREX2
protein.
Length = 236
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = -3
Query: 373 DQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADE 194
D++ S ++ ++ ++L L+ R + AH AE D L+ L E L WADE
Sbjct: 155 DRAHSHGTRARGRQGYSLGSLFHRYFRAEPSAAHSAEGDVHTLLLIFLHRAAELLAWADE 214
Query: 193 SCKTIHQIKPL 161
+ I+P+
Sbjct: 215 QARGWAHIEPM 225
>AF319572-1|AAK07619.1| 279|Homo sapiens 3'-5' exonuclease
TREX2-like protein protein.
Length = 279
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = -3
Query: 373 DQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADE 194
D++ S ++ ++ ++L L+ R + AH AE D L+ L E L WADE
Sbjct: 198 DRAHSHGTRARGRQGYSLGSLFHRYFRAEPSAAHSAEGDVHTLLLIFLHRAAELLAWADE 257
Query: 193 SCKTIHQIKPL 161
+ I+P+
Sbjct: 258 QARGWAHIEPM 268
>AF319571-1|AAK07618.1| 279|Homo sapiens 3'-5' exonuclease
TREX2-like protein protein.
Length = 279
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = -3
Query: 373 DQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADE 194
D++ S ++ ++ ++L L+ R + AH AE D L+ L E L WADE
Sbjct: 198 DRAHSHGTRARGRQGYSLGSLFHRYFRAEPSAAHSAEGDVHTLLLIFLHRAAELLAWADE 257
Query: 193 SCKTIHQIKPL 161
+ I+P+
Sbjct: 258 QARGWAHIEPM 268
>AF319570-1|AAK07617.1| 236|Homo sapiens 3'-5' exonuclease TREX2
protein.
Length = 236
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = -3
Query: 373 DQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADE 194
D++ S ++ ++ ++L L+ R + AH AE D L+ L E L WADE
Sbjct: 155 DRAHSHGTRARGRQGYSLGSLFHRYFRAEPSAAHSAEGDVHTLLLIFLHRAAELLAWADE 214
Query: 193 SCKTIHQIKPL 161
+ I+P+
Sbjct: 215 QARGWAHIEPM 225
>AF268075-1|AAG03025.1| 747|Homo sapiens TRAF6-binding protein T6BP
protein.
Length = 747
Score = 35.1 bits (77), Expect = 0.24
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Frame = -3
Query: 556 LLWPELDVSTENWEEIDNLCASFSKDTC-IDDEKSKKENDLNQQK--CTNLKKGRKNKND 386
LL +++ + + EE+ L A K+T + ++ + E +LN +K C L+ +K +
Sbjct: 149 LLELKIEKTMKEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQKGLTE 208
Query: 385 LTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVN-AHRA 266
+T QSL ++N+ KKR F+ L++D V+ H+A
Sbjct: 209 VT---QSLKMENEEFKKR-FSDATSKAHQLEEDIVSVTHKA 245
>AF151107-1|AAD48776.1| 236|Homo sapiens 3'-5' exonuclease TREX2
protein.
Length = 236
Score = 35.1 bits (77), Expect = 0.24
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = -3
Query: 373 DQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADE 194
D++ S ++ ++ ++L L+ R + AH AE D L+ L E L WADE
Sbjct: 155 DRAHSHGTRARGRQGYSLGSLFHRYFRAEPSAAHSAEGDVHTLLLIFLHRAAELLAWADE 214
Query: 193 SCKTIHQIKPL 161
+ I+P+
Sbjct: 215 QARGWAHIEPM 225
>AF090891-1|AAF24016.1| 747|Homo sapiens PRO0105 protein.
Length = 747
Score = 35.1 bits (77), Expect = 0.24
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Frame = -3
Query: 556 LLWPELDVSTENWEEIDNLCASFSKDTC-IDDEKSKKENDLNQQK--CTNLKKGRKNKND 386
LL +++ + + EE+ L A K+T + ++ + E +LN +K C L+ +K +
Sbjct: 149 LLELKIEKTMKEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQKGLTE 208
Query: 385 LTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVN-AHRA 266
+T QSL ++N+ KKR F+ L++D V+ H+A
Sbjct: 209 VT---QSLKMENEEFKKR-FSDATSKAHQLEEDIVSVTHKA 245
>U33821-1|AAA75595.2| 747|Homo sapiens tax1-binding protein TXBP151
protein.
Length = 747
Score = 34.7 bits (76), Expect = 0.32
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Frame = -3
Query: 556 LLWPELDVSTENWEEIDNLCASFSKDTC-IDDEKSKKENDLNQQK--CTNLKKGRKNKND 386
LL +++ + + EE+ L A K+T + ++ + E +LN +K C L+ +K +
Sbjct: 149 LLELKIEKTMKEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQKGLTE 208
Query: 385 LTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLT 206
+T QSL ++N+ KKR T AH E+D V + + E +
Sbjct: 209 VT---QSLKMENEEFKKRFSDATS-----------KAHHVEEDIVSVTHKAIEKETELDS 254
Query: 205 WADESCKTIHQIKPL 161
D+ K H+ + L
Sbjct: 255 LKDKLKKAQHEREQL 269
>AC004549-1|AAC13359.2| 596|Homo sapiens unknown protein.
Length = 596
Score = 34.3 bits (75), Expect = 0.43
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = -3
Query: 544 ELDVSTENWEEIDNLCASFSKDTC-IDDEKSKKENDLNQQK--CTNLKKGRKNKNDLTTQ 374
+++ + + EE+ L A K+T + ++ + E +LN +K C L+ +K ++T
Sbjct: 2 KIEKTMKEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQKGLTEVT-- 59
Query: 373 DQSLSIQNKSTKKREFTLTGLYKRLLDKDAVN-AHRA 266
QSL ++N+ KKR F+ L++D V+ H+A
Sbjct: 60 -QSLKMENEEFKKR-FSDATSKAHQLEEDIVSVTHKA 94
>AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 580 SKDDSASELLWPELDVSTENWEEIDNLCASFSKDTC--IDDEKSKKENDLNQQKCTNLKK 407
++DD+ EL+ + EE DNL A S+ C + D ++++N L Q ++L +
Sbjct: 2681 AEDDTLDNTFSEELEKQQQFTEEEDNLYAEASEKLCTPLLDLLTREKNQLEAQLKSSLNE 2740
Query: 406 GRKNKNDL 383
+K+K L
Sbjct: 2741 EKKSKQQL 2748
>AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 580 SKDDSASELLWPELDVSTENWEEIDNLCASFSKDTC--IDDEKSKKENDLNQQKCTNLKK 407
++DD+ EL+ + EE DNL A S+ C + D ++++N L Q ++L +
Sbjct: 2681 AEDDTLDNTFSEELEKQQQFTEEEDNLYAEASEKLCTPLLDLLTREKNQLEAQLKSSLNE 2740
Query: 406 GRKNKNDL 383
+K+K L
Sbjct: 2741 EKKSKQQL 2748
>AL390718-4|CAI14836.1| 581|Homo sapiens centrosomal protein 350kDa
protein.
Length = 581
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 580 SKDDSASELLWPELDVSTENWEEIDNLCASFSKDTC--IDDEKSKKENDLNQQKCTNLKK 407
++DD+ EL+ + EE DNL A S+ C + D ++++N L Q ++L +
Sbjct: 145 AEDDTLDNTFSEELEKQQQFTEEEDNLYAEASEKLCTPLLDLLTREKNQLEAQLKSSLNE 204
Query: 406 GRKNKNDL 383
+K+K L
Sbjct: 205 EKKSKQQL 212
>AL390718-2|CAI14834.1| 1291|Homo sapiens centrosomal protein 350kDa
protein.
Length = 1291
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 580 SKDDSASELLWPELDVSTENWEEIDNLCASFSKDTC--IDDEKSKKENDLNQQKCTNLKK 407
++DD+ EL+ + EE DNL A S+ C + D ++++N L Q ++L +
Sbjct: 855 AEDDTLDNTFSEELEKQQQFTEEEDNLYAEASEKLCTPLLDLLTREKNQLEAQLKSSLNE 914
Query: 406 GRKNKNDL 383
+K+K L
Sbjct: 915 EKKSKQQL 922
>AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 580 SKDDSASELLWPELDVSTENWEEIDNLCASFSKDTC--IDDEKSKKENDLNQQKCTNLKK 407
++DD+ EL+ + EE DNL A S+ C + D ++++N L Q ++L +
Sbjct: 2681 AEDDTLDNTFSEELEKQQQFTEEEDNLYAEASEKLCTPLLDLLTREKNQLEAQLKSSLNE 2740
Query: 406 GRKNKNDL 383
+K+K L
Sbjct: 2741 EKKSKQQL 2748
>AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated
protein 350 protein.
Length = 3117
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 580 SKDDSASELLWPELDVSTENWEEIDNLCASFSKDTC--IDDEKSKKENDLNQQKCTNLKK 407
++DD+ EL+ + EE DNL A S+ C + D ++++N L Q ++L +
Sbjct: 2681 AEDDTLDNTFSEELEKQQQFTEEEDNLYAEASEKLCTPLLDLLTREKNQLEAQLKSSLNE 2740
Query: 406 GRKNKNDL 383
+K+K L
Sbjct: 2741 EKKSKQQL 2748
>AB007949-1|BAA32325.2| 1288|Homo sapiens KIAA0480 protein protein.
Length = 1288
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 580 SKDDSASELLWPELDVSTENWEEIDNLCASFSKDTC--IDDEKSKKENDLNQQKCTNLKK 407
++DD+ EL+ + EE DNL A S+ C + D ++++N L Q ++L +
Sbjct: 852 AEDDTLDNTFSEELEKQQQFTEEEDNLYAEASEKLCTPLLDLLTREKNQLEAQLKSSLNE 911
Query: 406 GRKNKNDL 383
+K+K L
Sbjct: 912 EKKSKQQL 919
>Z15017-1|CAA78737.1| 261|Homo sapiens glycoprotein 39 protein.
Length = 261
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 544 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQK 425
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>X68550-1|CAA48554.1| 261|Homo sapiens TRAP protein.
Length = 261
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 544 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQK 425
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>X67878-1|CAA48077.1| 261|Homo sapiens CD40 ligand protein.
Length = 261
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 544 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQK 425
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>L07414-1|AAA35662.1| 261|Homo sapiens CD40 surface protein
protein.
Length = 261
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 544 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQK 425
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>EF064753-1|ABK41936.1| 261|Homo sapiens CD40 ligand (TNF
superfamily, member 5, hyper-IgM syndrome) protein.
Length = 261
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 544 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQK 425
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>D31797-1|BAA06599.1| 261|Homo sapiens CD40 ligand protein.
Length = 261
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 544 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQK 425
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>CR457119-1|CAG33400.1| 304|Homo sapiens TREX1 protein.
Length = 304
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -3
Query: 337 KREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESCKTIHQIKPL 161
++ ++L +Y RL + ++H AE D + L+ L W D + I+P+
Sbjct: 164 RKSYSLGSIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPM 222
>BT020053-1|AAV38856.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -3
Query: 337 KREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESCKTIHQIKPL 161
++ ++L +Y RL + ++H AE D + L+ L W D + I+P+
Sbjct: 164 RKSYSLGSIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPM 222
>BT020052-1|AAV38855.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -3
Query: 337 KREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESCKTIHQIKPL 161
++ ++L +Y RL + ++H AE D + L+ L W D + I+P+
Sbjct: 164 RKSYSLGSIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPM 222
>BC074950-1|AAH74950.1| 261|Homo sapiens CD40 ligand (TNF
superfamily, member 5, hyper-IgM syndrome) protein.
Length = 261
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 544 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQK 425
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>BC071754-1|AAH71754.1| 261|Homo sapiens CD40 ligand (TNF
superfamily, member 5, hyper-IgM syndrome) protein.
Length = 261
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 544 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQK 425
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>BC023630-1|AAH23630.1| 369|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 369
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -3
Query: 337 KREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESCKTIHQIKPL 161
++ ++L +Y RL + ++H AE D + L+ L W D + I+P+
Sbjct: 229 RKSYSLGSIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPM 287
>AY197739-1|AAP37943.1| 240|Homo sapiens CD154 protein protein.
Length = 240
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 544 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQK 425
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>AL135783-4|CAI42902.1| 240|Homo sapiens CD40 ligand (TNF
superfamily, member 5, hyper-IgMxpression) protein.
Length = 240
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 544 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQK 425
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>AL135783-3|CAI42901.1| 261|Homo sapiens CD40 ligand (TNF
superfamily, member 5, hyper-IgMcogene) protein.
Length = 261
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 544 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQK 425
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>AJ243797-1|CAB50866.1| 304|Homo sapiens deoxyribonuclease III
(DNase III) protein.
Length = 304
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -3
Query: 337 KREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESCKTIHQIKPL 161
++ ++L +Y RL + ++H AE D + L+ L W D + I+P+
Sbjct: 164 RKSYSLGSIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPM 222
>AF483777-1|AAL82504.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -3
Query: 337 KREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESCKTIHQIKPL 161
++ ++L +Y RL + ++H AE D + L+ L W D + I+P+
Sbjct: 164 RKSYSLGSIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPM 222
>AF319569-1|AAK07616.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -3
Query: 337 KREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESCKTIHQIKPL 161
++ ++L +Y RL + ++H AE D + L+ L W D + I+P+
Sbjct: 174 RKSYSLGSIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPM 232
>AF319568-1|AAK07615.1| 369|Homo sapiens 3'-5' exonuclease
TREX1-like protein protein.
Length = 369
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -3
Query: 337 KREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESCKTIHQIKPL 161
++ ++L +Y RL + ++H AE D + L+ L W D + I+P+
Sbjct: 229 RKSYSLGSIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPM 287
>AF319567-1|AAK07614.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -3
Query: 337 KREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESCKTIHQIKPL 161
++ ++L +Y RL + ++H AE D + L+ L W D + I+P+
Sbjct: 174 RKSYSLGSIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPM 232
>AF319566-1|AAK07613.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -3
Query: 337 KREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESCKTIHQIKPL 161
++ ++L +Y RL + ++H AE D + L+ L W D + I+P+
Sbjct: 174 RKSYSLGSIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPM 232
>AF151105-1|AAD48774.2| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -3
Query: 337 KREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESCKTIHQIKPL 161
++ ++L +Y RL + ++H AE D + L+ L W D + I+P+
Sbjct: 174 RKSYSLGSIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPM 232
>D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein
protein.
Length = 709
Score = 30.3 bits (65), Expect = 7.0
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -3
Query: 454 KKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNA 275
+KEN+L Q+K TNLK + L ++ L +N+ KK + L +L + N+
Sbjct: 563 EKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENS 622
Query: 274 HRAEDD 257
E++
Sbjct: 623 QLDEEN 628
>BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain
containing 88A protein.
Length = 1843
Score = 30.3 bits (65), Expect = 7.0
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -3
Query: 454 KKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNA 275
+KEN+L Q+K TNLK + L ++ L +N+ KK + L +L + N+
Sbjct: 638 EKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENS 697
Query: 274 HRAEDD 257
E++
Sbjct: 698 QLDEEN 703
>BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein.
Length = 887
Score = 30.3 bits (65), Expect = 7.0
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -3
Query: 454 KKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNA 275
+KEN+L Q+K TNLK + L ++ L +N+ KK + L +L + N+
Sbjct: 635 EKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENS 694
Query: 274 HRAEDD 257
E++
Sbjct: 695 QLDEEN 700
>AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.
Length = 6884
Score = 30.3 bits (65), Expect = 7.0
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Frame = -3
Query: 649 DSLIGFRKILKTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCI 470
DSL F K+ + Q+ L K + ++ L PEL + +E + +L +K + +
Sbjct: 1774 DSLEIFTKLEEIQQQILQQKHSMILLENQIGCLTPELSELKKQYESVSDLFN--TKKSVL 1831
Query: 469 DDEKSKKENDLNQQKCTNLKKGRKN-----KNDLTTQDQSLSIQNKSTKKREF-TLTGLY 308
D SK ND +C N N K + + S++ K K +F TL G
Sbjct: 1832 QDHFSKLLND----QCKNFNDWFSNIKVNLKECFESSETKKSVEQKLQKLSDFLTLEGRN 1887
Query: 307 KRLLDKDAVNAH 272
++ D+V H
Sbjct: 1888 SKIKQVDSVLKH 1899
>AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.
Length = 6885
Score = 30.3 bits (65), Expect = 7.0
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Frame = -3
Query: 649 DSLIGFRKILKTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCI 470
DSL F K+ + Q+ L K + ++ L PEL + +E + +L +K + +
Sbjct: 1775 DSLEIFTKLEEIQQQILQQKHSMILLENQIGCLTPELSELKKQYESVSDLFN--TKKSVL 1832
Query: 469 DDEKSKKENDLNQQKCTNLKKGRKN-----KNDLTTQDQSLSIQNKSTKKREF-TLTGLY 308
D SK ND +C N N K + + S++ K K +F TL G
Sbjct: 1833 QDHFSKLLND----QCKNFNDWFSNIKVNLKECFESSETKKSVEQKLQKLSDFLTLEGRN 1888
Query: 307 KRLLDKDAVNAH 272
++ D+V H
Sbjct: 1889 SKIKQVDSVLKH 1900
>AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein.
Length = 742
Score = 30.3 bits (65), Expect = 7.0
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -3
Query: 454 KKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNA 275
+KEN+L Q+K TNLK + L ++ L +N+ KK + L +L + N+
Sbjct: 563 EKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENS 622
Query: 274 HRAEDD 257
E++
Sbjct: 623 QLDEEN 628
>AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein.
Length = 1870
Score = 30.3 bits (65), Expect = 7.0
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -3
Query: 454 KKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNA 275
+KEN+L Q+K TNLK + L ++ L +N+ KK + L +L + N+
Sbjct: 638 EKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENS 697
Query: 274 HRAEDD 257
E++
Sbjct: 698 QLDEEN 703
>AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein
protein.
Length = 1843
Score = 30.3 bits (65), Expect = 7.0
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -3
Query: 454 KKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNA 275
+KEN+L Q+K TNLK + L ++ L +N+ KK + L +L + N+
Sbjct: 638 EKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENS 697
Query: 274 HRAEDD 257
E++
Sbjct: 698 QLDEEN 703
>BC005364-1|AAH05364.1| 342|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 342
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 555 CYGQNSTCLQKIGKKLIICVPHLAKTH 475
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL365185-2|CAH73629.1| 342|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 342
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 555 CYGQNSTCLQKIGKKLIICVPHLAKTH 475
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL365185-1|CAH73628.1| 315|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 315
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 555 CYGQNSTCLQKIGKKLIICVPHLAKTH 475
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL353149-2|CAH70341.1| 342|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 342
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 555 CYGQNSTCLQKIGKKLIICVPHLAKTH 475
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL353149-1|CAH70340.1| 315|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 315
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 555 CYGQNSTCLQKIGKKLIICVPHLAKTH 475
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL139406-2|CAH73712.1| 342|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 342
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 555 CYGQNSTCLQKIGKKLIICVPHLAKTH 475
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL139406-1|CAH73711.1| 315|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 315
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 555 CYGQNSTCLQKIGKKLIICVPHLAKTH 475
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 29.9 bits (64), Expect = 9.2
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -3
Query: 460 KSKKENDLNQQKCTNLKKGRKNKND-LTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDA 284
K KK L + KC +K ++ ND L+ ++ L +++S K+L DK
Sbjct: 49 KKKKPKKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKE 108
Query: 283 VNAHRAEDD 257
A R + D
Sbjct: 109 KKAKRKKKD 117
>AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 29.9 bits (64), Expect = 9.2
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -3
Query: 460 KSKKENDLNQQKCTNLKKGRKNKND-LTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDA 284
K KK L + KC +K ++ ND L+ ++ L +++S K+L DK
Sbjct: 49 KKKKPKKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKE 108
Query: 283 VNAHRAEDD 257
A R + D
Sbjct: 109 KKAKRKKKD 117
>AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens
cDNA FLJ45103 fis, clone BRAWH3032571, moderately
similar to Chromodomain helicase-DNA-binding protein 4.
).
Length = 1225
Score = 29.9 bits (64), Expect = 9.2
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -3
Query: 460 KSKKENDLNQQKCTNLKKGRKNKND-LTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDA 284
K KK L + KC +K ++ ND L+ ++ L +++S K+L DK
Sbjct: 49 KKKKPKKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKE 108
Query: 283 VNAHRAEDD 257
A R + D
Sbjct: 109 KKAKRKKKD 117
>AK125848-1|BAC86317.1| 1318|Homo sapiens protein ( Homo sapiens
cDNA FLJ43860 fis, clone TESTI4007404. ).
Length = 1318
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -3
Query: 370 QSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDDCVILIE 239
QSL +QN + + F L+ LY L + A RA C+IL++
Sbjct: 571 QSLIMQNPTADELHFLLSHLYIWLASEKAHERQRAVHSCMILLK 614
>AK002080-1|BAA92073.1| 315|Homo sapiens protein ( Homo sapiens
cDNA FLJ11218 fis, clone PLACE1008095. ).
Length = 315
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 555 CYGQNSTCLQKIGKKLIICVPHLAKTH 475
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 29.9 bits (64), Expect = 9.2
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -3
Query: 460 KSKKENDLNQQKCTNLKKGRKNKND-LTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDA 284
K KK L + KC +K ++ ND L+ ++ L +++S K+L DK
Sbjct: 49 KKKKPKKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKE 108
Query: 283 VNAHRAEDD 257
A R + D
Sbjct: 109 KKAKRKKKD 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,726,412
Number of Sequences: 237096
Number of extensions: 1479398
Number of successful extensions: 3308
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 3029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3270
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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