Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12p06
(671 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 272 6e-73
AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein pr... 272 6e-73
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 251 2e-66
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 223 6e-58
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 223 6e-58
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 221 2e-57
BC132724-1|AAI32725.1| 525|Homo sapiens peptidase (mitochondria... 87 7e-17
BC111399-1|AAI11400.1| 525|Homo sapiens peptidase (mitochondria... 87 7e-17
BC033103-1|AAH33103.2| 526|Homo sapiens PMPCA protein protein. 87 7e-17
AL592301-14|CAI13945.1| 525|Homo sapiens peptidase (mitochondri... 87 7e-17
D50913-1|BAA09472.1| 528|Homo sapiens KIAA0123 protein. 86 1e-16
D21064-1|BAA04643.1| 528|Homo sapiens KIAA0123 protein. 86 1e-16
BC022949-1|AAH22949.1| 521|Homo sapiens PMPCA protein protein. 83 9e-16
BC004342-1|AAH04342.1| 143|Homo sapiens PMPCA protein protein. 75 2e-13
AL592301-15|CAI13946.1| 271|Homo sapiens peptidase (mitochondri... 66 1e-10
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 55 2e-07
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 54 5e-07
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 54 5e-07
AK129769-1|BAC85231.1| 149|Homo sapiens D1). protein. 36 0.13
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 35 0.30
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 35 0.30
BC032727-1|AAH32727.1| 246|Homo sapiens SFRS11 protein protein. 35 0.30
BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein. 35 0.30
BC009840-1|AAH09840.1| 247|Homo sapiens SFRS11 protein protein. 35 0.30
BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein. 35 0.30
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 35 0.30
AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 35 0.30
AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor, argini... 35 0.30
AL929302-9|CAO03550.1| 660|Homo sapiens RALBP1 associated Eps d... 31 2.8
AL929302-8|CAI41286.1| 659|Homo sapiens RALBP1 associated Eps d... 31 2.8
AL732371-3|CAO03570.1| 660|Homo sapiens RALBP1 associated Eps d... 31 2.8
AL732371-2|CAI40017.1| 659|Homo sapiens RALBP1 associated Eps d... 31 2.8
AF511533-1|AAM43933.1| 659|Homo sapiens RALBP1 associated Eps d... 31 2.8
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 30 6.6
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 30 6.6
BC028069-1|AAH28069.1| 1061|Homo sapiens NLR family, pyrin domai... 30 8.7
AY154467-1|AAO18163.1| 1061|Homo sapiens NALP12 protein. 30 8.7
AY116207-1|AAM75145.1| 892|Homo sapiens monarch-1 splice form I... 30 8.7
AY116206-1|AAM75144.1| 950|Homo sapiens monarch-1 splice form I... 30 8.7
AY116205-1|AAM75143.1| 1006|Homo sapiens monarch-1 splice form I... 30 8.7
AY116204-1|AAM75142.1| 1062|Homo sapiens monarch-1 protein. 30 8.7
AY095146-1|AAM18227.1| 1061|Homo sapiens PYRIN-containing APAF1-... 30 8.7
AF231021-1|AAK14942.1| 287|Homo sapiens leucine-rich-repeat pro... 30 8.7
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 272 bits (668), Expect = 6e-73
Identities = 123/180 (68%), Positives = 147/180 (81%)
Frame = -2
Query: 661 DNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLWGIYFV 482
D I LMVANTLIG WDRS GGG N +S LA+ GNLCHSFQSFNT Y DTGLWG+Y V
Sbjct: 300 DTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMV 359
Query: 481 AESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLC 302
ES + DML+ +QKEWM+LCTSVTE EV RA+NLLKTNMLLQLDG+TP+CEDIGRQMLC
Sbjct: 360 CESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLC 419
Query: 301 YNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIRGGMYWVR 122
YNRRIPI EL+ARI++V + +R+VC KY+++R PA+AAVGP + LPD+ +IR M W+R
Sbjct: 420 YNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIKQLPDFKQIRSNMCWLR 479
>AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein
protein.
Length = 316
Score = 272 bits (668), Expect = 6e-73
Identities = 123/180 (68%), Positives = 147/180 (81%)
Frame = -2
Query: 661 DNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLWGIYFV 482
D I LMVANTLIG WDRS GGG N +S LA+ GNLCHSFQSFNT Y DTGLWG+Y V
Sbjct: 136 DTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMV 195
Query: 481 AESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLC 302
ES + DML+ +QKEWM+LCTSVTE EV RA+NLLKTNMLLQLDG+TP+CEDIGRQMLC
Sbjct: 196 CESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLC 255
Query: 301 YNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIRGGMYWVR 122
YNRRIPI EL+ARI++V + +R+VC KY+++R PA+AAVGP + LPD+ +IR M W+R
Sbjct: 256 YNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIKQLPDFKQIRSNMCWLR 315
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 251 bits (614), Expect = 2e-66
Identities = 114/161 (70%), Positives = 134/161 (83%)
Frame = -2
Query: 661 DNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLWGIYFV 482
D I LMVANTLIG WDRS GGG N +S LA+ GNLCHSFQSFNT Y DTGLWG+Y V
Sbjct: 309 DTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMV 368
Query: 481 AESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLC 302
ES + DML+ +QKEWM+LCTSVTE EV RA+NLLKTNMLLQLDG+TP+CEDIGRQMLC
Sbjct: 369 CESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLC 428
Query: 301 YNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVG 179
YNRRIPI EL+ARI++V + +R+VC KY+++R PA+AAVG
Sbjct: 429 YNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVG 469
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 223 bits (544), Expect = 6e-58
Identities = 96/180 (53%), Positives = 130/180 (72%)
Frame = -2
Query: 661 DNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLWGIYFV 482
DN+ L VAN +IG +D + GGG + +S LA A LC SFQ+F+ CY +TGL G +FV
Sbjct: 300 DNVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFSICYAETGLLGAHFV 359
Query: 481 AESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLC 302
+ +++DDM++ +Q +WM+LCTS TE EV R KN+L+ ++ LDGTTPVCEDIGR +L
Sbjct: 360 CDRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRNALVSHLDGTTPVCEDIGRSLLT 419
Query: 301 YNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIRGGMYWVR 122
Y RRIP+ E ++RI V VR++C KY++D+CPAVA GP E LPDY RIR GM+W+R
Sbjct: 420 YGRRIPLAEWESRIAEVDASVVREICSKYIYDQCPAVAGYGPIEQLPDYNRIRSGMFWLR 479
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 223 bits (544), Expect = 6e-58
Identities = 96/180 (53%), Positives = 130/180 (72%)
Frame = -2
Query: 661 DNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLWGIYFV 482
DN+ L VAN +IG +D + GGG + +S LA A LC SFQ+F+ CY +TGL G +FV
Sbjct: 300 DNVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFSICYAETGLLGAHFV 359
Query: 481 AESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLC 302
+ +++DDM++ +Q +WM+LCTS TE EV R KN+L+ ++ LDGTTPVCEDIGR +L
Sbjct: 360 CDRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRNALVSHLDGTTPVCEDIGRSLLT 419
Query: 301 YNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIRGGMYWVR 122
Y RRIP+ E ++RI V VR++C KY++D+CPAVA GP E LPDY RIR GM+W+R
Sbjct: 420 YGRRIPLAEWESRIAEVDASVVREICSKYIYDQCPAVAGYGPIEQLPDYNRIRSGMFWLR 479
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 221 bits (539), Expect = 2e-57
Identities = 95/180 (52%), Positives = 130/180 (72%)
Frame = -2
Query: 661 DNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLWGIYFV 482
D++ L VAN +IG +D + GGG + +S LA A LC SFQ+F+ CY +TGL G +FV
Sbjct: 300 DSVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFSICYAETGLLGAHFV 359
Query: 481 AESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLC 302
+ +++DDM++ +Q +WM+LCTS TE EV R KN+L+ ++ LDGTTPVCEDIGR +L
Sbjct: 360 CDRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRNALVSHLDGTTPVCEDIGRSLLT 419
Query: 301 YNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIRGGMYWVR 122
Y RRIP+ E ++RI V VR++C KY++D+CPAVA GP E LPDY RIR GM+W+R
Sbjct: 420 YGRRIPLAEWESRIAEVDASVVREICSKYIYDQCPAVAGYGPIEQLPDYNRIRSGMFWLR 479
>BC132724-1|AAI32725.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 86.6 bits (205), Expect = 7e-17
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Frame = -2
Query: 667 DADNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCH---SFQSFNTCYKDTGLW 497
+ D IP V N ++G GG + +V N H + S++ Y+DTGL
Sbjct: 331 EEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLL 390
Query: 496 GIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIG 317
I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + +++ L+ + ED+G
Sbjct: 391 CIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVG 450
Query: 316 RQMLCYNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIR 143
RQ+L R HEL I +V ++V+ V K L + PAVAA+G LP Y I+
Sbjct: 451 RQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGK-PAVAALGDLTDLPTYEHIQ 507
>BC111399-1|AAI11400.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 86.6 bits (205), Expect = 7e-17
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Frame = -2
Query: 667 DADNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCH---SFQSFNTCYKDTGLW 497
+ D IP V N ++G GG + +V N H + S++ Y+DTGL
Sbjct: 331 EEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLL 390
Query: 496 GIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIG 317
I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + +++ L+ + ED+G
Sbjct: 391 CIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVG 450
Query: 316 RQMLCYNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIR 143
RQ+L R HEL I +V ++V+ V K L + PAVAA+G LP Y I+
Sbjct: 451 RQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGK-PAVAALGDLTDLPTYEHIQ 507
>BC033103-1|AAH33103.2| 526|Homo sapiens PMPCA protein protein.
Length = 526
Score = 86.6 bits (205), Expect = 7e-17
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Frame = -2
Query: 667 DADNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCH---SFQSFNTCYKDTGLW 497
+ D IP V N ++G GG + +V N H + S++ Y+DTGL
Sbjct: 332 EEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLL 391
Query: 496 GIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIG 317
I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + +++ L+ + ED+G
Sbjct: 392 CIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVG 451
Query: 316 RQMLCYNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIR 143
RQ+L R HEL I +V ++V+ V K L + PAVAA+G LP Y I+
Sbjct: 452 RQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGK-PAVAALGDLTDLPTYEHIQ 508
>AL592301-14|CAI13945.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 86.6 bits (205), Expect = 7e-17
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Frame = -2
Query: 667 DADNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCH---SFQSFNTCYKDTGLW 497
+ D IP V N ++G GG + +V N H + S++ Y+DTGL
Sbjct: 331 EEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLL 390
Query: 496 GIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIG 317
I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + +++ L+ + ED+G
Sbjct: 391 CIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVG 450
Query: 316 RQMLCYNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIR 143
RQ+L R HEL I +V ++V+ V K L + PAVAA+G LP Y I+
Sbjct: 451 RQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGK-PAVAALGDLTDLPTYEHIQ 507
>D50913-1|BAA09472.1| 528|Homo sapiens KIAA0123 protein.
Length = 528
Score = 85.8 bits (203), Expect = 1e-16
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Frame = -2
Query: 667 DADNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCH---SFQSFNTCYKDTGLW 497
+ D IP V N ++G GG + +V N H + S++ Y+DTGL
Sbjct: 334 EEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLL 393
Query: 496 GIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIG 317
I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + +++ L+ + ED+G
Sbjct: 394 CIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVG 453
Query: 316 RQMLCYNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIR 143
RQ+L R HEL I +V ++V+ V K L + PAVAA+G LP Y I+
Sbjct: 454 RQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGK-PAVAALGDLTDLPTYEDIQ 510
>D21064-1|BAA04643.1| 528|Homo sapiens KIAA0123 protein.
Length = 528
Score = 85.8 bits (203), Expect = 1e-16
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Frame = -2
Query: 667 DADNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCH---SFQSFNTCYKDTGLW 497
+ D IP V N ++G GG + +V N H + S++ Y+DTGL
Sbjct: 334 EEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLL 393
Query: 496 GIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIG 317
I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + +++ L+ + ED+G
Sbjct: 394 CIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVG 453
Query: 316 RQMLCYNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIR 143
RQ+L R HEL I +V ++V+ V K L + PAVAA+G LP Y I+
Sbjct: 454 RQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGK-PAVAALGDLTDLPTYEDIQ 510
>BC022949-1|AAH22949.1| 521|Homo sapiens PMPCA protein protein.
Length = 521
Score = 83.0 bits (196), Expect = 9e-16
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 3/178 (1%)
Frame = -2
Query: 667 DADNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCH---SFQSFNTCYKDTGLW 497
+ D IP V N ++G GG + +V N H + S++ Y+DTGL
Sbjct: 327 EEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLL 386
Query: 496 GIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIG 317
I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + +++ L+ + ED+G
Sbjct: 387 CIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVG 446
Query: 316 RQMLCYNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIR 143
RQ+L R HEL I +V ++V+ V K L + PAVAA+ LP Y I+
Sbjct: 447 RQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGK-PAVAALCDLTDLPTYEHIQ 503
>BC004342-1|AAH04342.1| 143|Homo sapiens PMPCA protein protein.
Length = 143
Score = 75.4 bits (177), Expect = 2e-13
Identities = 46/125 (36%), Positives = 72/125 (57%)
Frame = -2
Query: 517 YKDTGLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTT 338
Y+DTGL I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + +++ L+
Sbjct: 2 YEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRP 61
Query: 337 PVCEDIGRQMLCYNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPD 158
+ ED+GRQ+L R HEL I +V ++V+ V K L + PAVAA+G LP
Sbjct: 62 VIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGK-PAVAALGDLTDLPT 120
Query: 157 YTRIR 143
Y I+
Sbjct: 121 YEHIQ 125
>AL592301-15|CAI13946.1| 271|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 271
Score = 65.7 bits (153), Expect = 1e-10
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Frame = -2
Query: 667 DADNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCH---SFQSFNTCYKDTGLW 497
+ D IP V N ++G GG + +V N H + S++ Y+DTGL
Sbjct: 39 EEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLL 98
Query: 496 GIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIG 317
I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + +++ L+ + ED+G
Sbjct: 99 CIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVG 158
Query: 316 RQMLCYNRRIPIHEL 272
RQ+L R HEL
Sbjct: 159 RQVLATRSRKLPHEL 173
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 55.2 bits (127), Expect = 2e-07
Identities = 32/131 (24%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Frame = -2
Query: 598 GANNASYLARA-ASVGNLCHSFQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIQKEWMKL 422
G+N S+L +A A +FN Y D+GL+GIY ++++ D++ + ++
Sbjct: 302 GSNTTSHLHQAVAKATQQPFDVSAFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKRI 361
Query: 421 CT-SVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLCYNRRIPIHELDARIESVTV 245
+++ +V+ AKN LK L+ ++ + E++G Q L +P + +I+SV
Sbjct: 362 AQGNLSNTDVQAAKNKLKAGYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVAN 421
Query: 244 QNVRDVCYKYL 212
++ + K++
Sbjct: 422 ADIINAAKKFV 432
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 54.0 bits (124), Expect = 5e-07
Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Frame = -2
Query: 598 GANNASYLARA-ASVGNLCHSFQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIQKEWMKL 422
G+N S+L +A A +FN Y D+GL+GIY ++++ D++ + +
Sbjct: 302 GSNTTSHLHQAVAKATQQPFDVSAFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKTI 361
Query: 421 CT-SVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLCYNRRIPIHELDARIESVTV 245
+++ +V+ AKN LK L+ ++ + E++G Q L +P + +I+SV
Sbjct: 362 AQGNLSNTDVQAAKNKLKAGYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVAN 421
Query: 244 QNVRDVCYKYL 212
++ + K++
Sbjct: 422 ADIINAAKKFV 432
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 54.0 bits (124), Expect = 5e-07
Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Frame = -2
Query: 598 GANNASYLARA-ASVGNLCHSFQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIQKEWMKL 422
G+N S+L +A A +FN Y D+GL+GIY ++++ D++ + +
Sbjct: 302 GSNTTSHLHQAVAKATQQPFDVSAFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKTI 361
Query: 421 CT-SVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLCYNRRIPIHELDARIESVTV 245
+++ +V+ AKN LK L+ ++ + E++G Q L +P + +I+SV
Sbjct: 362 AQGNLSNTDVQAAKNKLKAGYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVAN 421
Query: 244 QNVRDVCYKYL 212
++ + K++
Sbjct: 422 ADIINAAKKFV 432
>AK129769-1|BAC85231.1| 149|Homo sapiens D1). protein.
Length = 149
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -2
Query: 400 EVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLCYNRRIPIHEL 272
E+ERAK L + +++ L+ + ED+GRQ+L R HEL
Sbjct: 9 ELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHEL 51
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 269 IKFMDGDASVVAEHLTTNIFTDRS 340
+KF D D++VVA+HLT +F DR+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDRA 104
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 269 IKFMDGDASVVAEHLTTNIFTDRS 340
+KF D D++VVA+HLT +F DR+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDRA 104
>BC032727-1|AAH32727.1| 246|Homo sapiens SFRS11 protein protein.
Length = 246
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 269 IKFMDGDASVVAEHLTTNIFTDRS 340
+KF D D++VVA+HLT +F DR+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDRA 104
>BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein.
Length = 394
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 269 IKFMDGDASVVAEHLTTNIFTDRS 340
+KF D D++VVA+HLT +F DR+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDRA 104
>BC009840-1|AAH09840.1| 247|Homo sapiens SFRS11 protein protein.
Length = 247
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 269 IKFMDGDASVVAEHLTTNIFTDRS 340
+KF D D++VVA+HLT +F DR+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDRA 104
>BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein.
Length = 321
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 269 IKFMDGDASVVAEHLTTNIFTDRS 340
+KF D D++VVA+HLT +F DR+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDRA 104
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 269 IKFMDGDASVVAEHLTTNIFTDRS 340
+KF D D++VVA+HLT +F DR+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDRA 104
>AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 269 IKFMDGDASVVAEHLTTNIFTDRS 340
+KF D D++VVA+HLT +F DR+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDRA 104
>AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 389
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 269 IKFMDGDASVVAEHLTTNIFTDRS 340
+KF D D++VVA+HLT +F DR+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDRA 104
>AL929302-9|CAO03550.1| 660|Homo sapiens RALBP1 associated Eps
domain containing 2 protein.
Length = 660
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 226 CYKYLFDRCPAVAAVGPTEGLPDYTRIRGG 137
CY LF RC A GP G P+ R+ G
Sbjct: 37 CYSELFARCAGAAGGGPGSGPPEAARVAPG 66
>AL929302-8|CAI41286.1| 659|Homo sapiens RALBP1 associated Eps
domain containing 2 protein.
Length = 659
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 226 CYKYLFDRCPAVAAVGPTEGLPDYTRIRGG 137
CY LF RC A GP G P+ R+ G
Sbjct: 37 CYSELFARCAGAAGGGPGSGPPEAARVAPG 66
>AL732371-3|CAO03570.1| 660|Homo sapiens RALBP1 associated Eps
domain containing 2 protein.
Length = 660
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 226 CYKYLFDRCPAVAAVGPTEGLPDYTRIRGG 137
CY LF RC A GP G P+ R+ G
Sbjct: 37 CYSELFARCAGAAGGGPGSGPPEAARVAPG 66
>AL732371-2|CAI40017.1| 659|Homo sapiens RALBP1 associated Eps
domain containing 2 protein.
Length = 659
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 226 CYKYLFDRCPAVAAVGPTEGLPDYTRIRGG 137
CY LF RC A GP G P+ R+ G
Sbjct: 37 CYSELFARCAGAAGGGPGSGPPEAARVAPG 66
>AF511533-1|AAM43933.1| 659|Homo sapiens RALBP1 associated Eps
domain containing protein 2a protein.
Length = 659
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 226 CYKYLFDRCPAVAAVGPTEGLPDYTRIRGG 137
CY LF RC A GP G P+ R+ G
Sbjct: 37 CYSELFARCAGAAGGGPGSGPPEAARVAPG 66
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 30.3 bits (65), Expect = 6.6
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -2
Query: 481 AESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCED 323
A S +LDD Y + C + T G+ + + ML +LDG VC D
Sbjct: 637 ASSWKLDDGDYLCEDGCQNNCPACTPGQAQHYEGDRLCGMLTKLDGPFAVCHD 689
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 30.3 bits (65), Expect = 6.6
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -2
Query: 481 AESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCED 323
A S +LDD Y + C + T G+ + + ML +LDG VC D
Sbjct: 637 ASSWKLDDGDYLCEDGCQNNCPACTPGQAQHYEGDRLCGMLTKLDGPFAVCHD 689
>BC028069-1|AAH28069.1| 1061|Homo sapiens NLR family, pyrin domain
containing 12 protein.
Length = 1061
Score = 29.9 bits (64), Expect = 8.7
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -2
Query: 505 GLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNM-LLQLDGTTPVC 329
G G+ + E L+ +Q ++ C + G + ++L TN L++LD T
Sbjct: 783 GFPGMMLLCEGLRHPQC--RLQMIQLRKC-QLESGACQEMASVLGTNPHLVELDLTGNAL 839
Query: 328 EDIGRQMLCYNRRIPIHEL 272
ED+G ++LC R P+ L
Sbjct: 840 EDLGLRLLCQGLRHPVCRL 858
>AY154467-1|AAO18163.1| 1061|Homo sapiens NALP12 protein.
Length = 1061
Score = 29.9 bits (64), Expect = 8.7
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -2
Query: 505 GLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNM-LLQLDGTTPVC 329
G G+ + E L+ +Q ++ C + G + ++L TN L++LD T
Sbjct: 783 GFPGMMLLCEGLRHPQC--RLQMIQLRKC-QLESGACQEMASVLGTNPHLVELDLTGNAL 839
Query: 328 EDIGRQMLCYNRRIPIHEL 272
ED+G ++LC R P+ L
Sbjct: 840 EDLGLRLLCQGLRHPVCRL 858
>AY116207-1|AAM75145.1| 892|Homo sapiens monarch-1 splice form IV
protein.
Length = 892
Score = 29.9 bits (64), Expect = 8.7
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -2
Query: 505 GLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNM-LLQLDGTTPVC 329
G G+ + E L+ +Q ++ C + G + ++L TN L++LD T
Sbjct: 784 GFPGMMLLCEGLRHPQC--RLQMIQLRKC-QLESGACQEMASVLGTNPHLVELDLTGNAL 840
Query: 328 EDIGRQMLCYNRRIPIHEL 272
ED+G ++LC R P+ L
Sbjct: 841 EDLGLRLLCQGLRHPVCRL 859
>AY116206-1|AAM75144.1| 950|Homo sapiens monarch-1 splice form III
protein.
Length = 950
Score = 29.9 bits (64), Expect = 8.7
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -2
Query: 505 GLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNM-LLQLDGTTPVC 329
G G+ + E L+ +Q ++ C + G + ++L TN L++LD T
Sbjct: 784 GFPGMMLLCEGLRHPQC--RLQMIQLRKC-QLESGACQEMASVLGTNPHLVELDLTGNAL 840
Query: 328 EDIGRQMLCYNRRIPIHEL 272
ED+G ++LC R P+ L
Sbjct: 841 EDLGLRLLCQGLRHPVCRL 859
>AY116205-1|AAM75143.1| 1006|Homo sapiens monarch-1 splice form II
protein.
Length = 1006
Score = 29.9 bits (64), Expect = 8.7
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -2
Query: 505 GLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNM-LLQLDGTTPVC 329
G G+ + E L+ +Q ++ C + G + ++L TN L++LD T
Sbjct: 784 GFPGMMLLCEGLRHPQC--RLQMIQLRKC-QLESGACQEMASVLGTNPHLVELDLTGNAL 840
Query: 328 EDIGRQMLCYNRRIPIHEL 272
ED+G ++LC R P+ L
Sbjct: 841 EDLGLRLLCQGLRHPVCRL 859
>AY116204-1|AAM75142.1| 1062|Homo sapiens monarch-1 protein.
Length = 1062
Score = 29.9 bits (64), Expect = 8.7
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -2
Query: 505 GLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNM-LLQLDGTTPVC 329
G G+ + E L+ +Q ++ C + G + ++L TN L++LD T
Sbjct: 784 GFPGMMLLCEGLRHPQC--RLQMIQLRKC-QLESGACQEMASVLGTNPHLVELDLTGNAL 840
Query: 328 EDIGRQMLCYNRRIPIHEL 272
ED+G ++LC R P+ L
Sbjct: 841 EDLGLRLLCQGLRHPVCRL 859
>AY095146-1|AAM18227.1| 1061|Homo sapiens PYRIN-containing APAF1-like
protein 7 protein.
Length = 1061
Score = 29.9 bits (64), Expect = 8.7
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -2
Query: 505 GLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNM-LLQLDGTTPVC 329
G G+ + E L+ +Q ++ C + G + ++L TN L++LD T
Sbjct: 783 GFPGMMLLCEGLRHPQC--RLQMIQLRKC-QLESGACQEMASVLGTNPHLVELDLTGNAL 839
Query: 328 EDIGRQMLCYNRRIPIHEL 272
ED+G ++LC R P+ L
Sbjct: 840 EDLGLRLLCQGLRHPVCRL 858
>AF231021-1|AAK14942.1| 287|Homo sapiens leucine-rich-repeat
protein RNO2 protein.
Length = 287
Score = 29.9 bits (64), Expect = 8.7
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -2
Query: 505 GLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNM-LLQLDGTTPVC 329
G G+ + E L+ +Q ++ C + G + ++L TN L++LD T
Sbjct: 66 GFPGMMLLCEGLRHPQC--RLQMIQLRKC-QLESGACQEMASVLGTNPHLVELDLTGNAL 122
Query: 328 EDIGRQMLCYNRRIPIHEL 272
ED+G ++LC R P+ L
Sbjct: 123 EDLGLRLLCQGLRHPVCRL 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,056,813
Number of Sequences: 237096
Number of extensions: 1935570
Number of successful extensions: 4764
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 4598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4757
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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