Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12o12
(666 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 84 1e-18
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 62 3e-12
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 42 5e-06
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 25 0.65
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 25 0.65
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 25 0.86
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 2.6
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 23 3.5
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 22 4.6
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 22 6.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 8.0
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 8.0
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 83.8 bits (198), Expect = 1e-18
Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 8/135 (5%)
Frame = -1
Query: 624 DYSGEQK--PFIDLXIEIAEEKG--LSDMEVIHELATFIAAGHDTVPYTLLYTLMCVGSH 457
D GE+K F+DL IE A + G L+D EV ++ T + GHDT + L +G H
Sbjct: 309 DDVGEKKRQAFLDLLIE-AGQNGVLLTDKEVKEQVDTIMFEGHDTTASGSSFFLAVMGCH 367
Query: 456 PPVQQRIYEELQQVLGSDD--VTKQNLSSLVYLEATIKETMRLYPIAPVVSRVTDCDVKL 283
P +Q+++ +EL ++ G D T Q+ + YLE + ET+R+YP P+++R D+KL
Sbjct: 368 PDIQEKVIQELDEIFGDSDRPATFQDTLEMKYLERCLLETLRMYPPVPLIAREIKTDLKL 427
Query: 282 RNS--TIPSGASVAL 244
+ TIP+G +V +
Sbjct: 428 ASGDYTIPAGCTVVI 442
Score = 57.6 bits (133), Expect = 1e-10
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Frame = -2
Query: 242 LHHHPVWGSDVEHFKPERWLDPTTLPEN--AFAGFSTGKRNCIGKTFAMMSMKTTLAHLL 69
LH P + + F P+ +L T + AF FS G R+C+G+ +AM+ +K L+ +L
Sbjct: 447 LHRQPHIYPNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLSTIL 506
Query: 68 RQYRVTADITRMEAKL--DIILK 6
R +RV +D+ E +L DIILK
Sbjct: 507 RNFRVRSDVKESEFRLQADIILK 529
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 62.5 bits (145), Expect = 3e-12
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Frame = -1
Query: 579 IAEEKGLSDMEVIHELATFIAAGHDTVPYTLLYTLMCVGSHPPVQQRIYEELQQVLGSD- 403
I +K L + + FIAAG T+ TL++ +G +P VQ ++YEE + +
Sbjct: 309 ILRQKNLDIRDKKAAIVDFIAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEETYALAPAGC 368
Query: 402 DVTKQNLSSLVYLEATIKETMRLYPIAPVVSRVTDCDVKLRNSTIPSGASVAL 244
D+T NL YL A I E++RL P ++R+ D ++L + +G V L
Sbjct: 369 DLTIDNLRKAKYLRACITESLRLIPTTTCIARILDEPIELSGYRLTAGTVVLL 421
Score = 47.2 bits (107), Expect = 1e-07
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = -2
Query: 215 DVEHFKPERWLDPTTLPENAF--AGFSTGKRNCIGKTFAMMSMKTTLAHLLRQYRVTADI 42
D + + PERW PTT P + A F G+R C GK F ++++ LA ++R++ + +
Sbjct: 435 DAKKYLPERWTTPTT-PHSPLLVAPFGAGRRICPGKRFVDLALQLILAKIIREFEIIVE- 492
Query: 41 TRMEAKLDIILKP 3
++ + + IL P
Sbjct: 493 EELDLQFEFILAP 505
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 41.9 bits (94), Expect = 5e-06
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = -1
Query: 561 LSDMEVIHELATFIAAGHDTVPYTLLYTLMCVGSHPPVQQRIYEELQQVL--GSDDVTKQ 388
L+D + + F AG +T T+ L + + VQ+++ EE+ + ++
Sbjct: 289 LTDSLIAAQAFVFFLAGFETSSTTMSNALYELALNQDVQKKLREEINTFCPKNNKELKYD 348
Query: 387 NLSSLVYLEATIKETMRLYPIAPVVSRVTDCDVKLRNSTI 268
++ + YL+ KET+R+YP A ++ R D ++ I
Sbjct: 349 DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKI 388
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 25.0 bits (52), Expect = 0.65
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = -1
Query: 432 EELQQVLGSDDVTKQNLSSLVYLEATIKETMRLYPIAPVVSRVTDCDVKLRNSTIPSGAS 253
++LQQ D KQ L+Y I L PV ++ DC L + + GA
Sbjct: 364 DKLQQTYRELDGEKQKTDRLLYSVLPISVANELRHSRPVPAKKYDCVTLLFSGIVGFGAY 423
Query: 252 VA 247
A
Sbjct: 424 CA 425
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 25.0 bits (52), Expect = 0.65
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = -1
Query: 432 EELQQVLGSDDVTKQNLSSLVYLEATIKETMRLYPIAPVVSRVTDCDVKLRNSTIPSGAS 253
++LQQ D KQ L+Y I L PV ++ DC L + + GA
Sbjct: 364 DKLQQTYRELDGEKQKTDRLLYSVLPISVANELRHSRPVPAKKYDCVTLLFSGIVGFGAY 423
Query: 252 VA 247
A
Sbjct: 424 CA 425
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 24.6 bits (51), Expect = 0.86
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 164 ENAFAGFSTGKRNCIGKTFAMMSMKTTLAH 75
EN F F+T R CIG+T M ++ H
Sbjct: 317 ENRFPLFTTVHRICIGETMPMELIENLRNH 346
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 64 WRSRCARVVFIDIMAKVLPMQFLFPV-LKPAKAFS 165
W S C+ VF+ +M + ++ PV K K +S
Sbjct: 279 WMSSCSVFVFLSLMEFAVVNNYMGPVATKAMKGYS 313
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 507 DTVPYTLLYTLMCVGSHPPV 448
D V Y ++ C+G H PV
Sbjct: 361 DAVEYGIIGPTTCMGDHKPV 380
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 508 VAGRYERGELVYYLH 552
+ + RGEL YY+H
Sbjct: 224 IVNKDRRGELFYYMH 238
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 559 KPFFLCYFYXQIYEGLLFSRIILR 630
+P L + +Y GLL IILR
Sbjct: 118 EPILLIAYIYHLYMGLLSGGIILR 141
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 243 SPPPPCVGLRRGA 205
+PPPP V R GA
Sbjct: 337 TPPPPLVWRRNGA 349
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 281 EILQYHQGPVSLCLHHHPVWGSDVE 207
E L+ H P + L +P+ G D+E
Sbjct: 622 EPLRIHVSPTTYILLKYPISGFDLE 646
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,423
Number of Sequences: 438
Number of extensions: 3439
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -