Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt12m01
         (400 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023630-1|AAY85030.1|   86|Drosophila melanogaster IP05690p pro...    91   5e-19
AE013599-691|AAM68831.1|   86|Drosophila melanogaster CG30354-PA...    91   5e-19
BT021290-1|AAX33438.1|  985|Drosophila melanogaster RE31401p pro...    27   9.2  
AE014298-785|AAF46074.1|  985|Drosophila melanogaster CG4078-PA ...    27   9.2  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    27   9.2  

>BT023630-1|AAY85030.1|   86|Drosophila melanogaster IP05690p
           protein.
          Length = 86

 Score = 91.1 bits (216), Expect = 5e-19
 Identities = 44/79 (55%), Positives = 53/79 (67%)
 Frame = -1

Query: 355 VPVVKAXXXXXXELVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELI 176
           VPV+KA       LVDPQ +LRE+C  K    +++ KYQECNDRVN +SKT ETC EEL 
Sbjct: 9   VPVLKADDDEKE-LVDPQAALREKCQAKGHIASLYNKYQECNDRVNGKSKTTETCMEELF 67

Query: 175 DYVHVLDKCVTKDLFKRLK 119
           D+V  LD CV   LF +LK
Sbjct: 68  DFVAELDHCVAHSLFSKLK 86


>AE013599-691|AAM68831.1|   86|Drosophila melanogaster CG30354-PA
           protein.
          Length = 86

 Score = 91.1 bits (216), Expect = 5e-19
 Identities = 44/79 (55%), Positives = 53/79 (67%)
 Frame = -1

Query: 355 VPVVKAXXXXXXELVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELI 176
           VPV+KA       LVDPQ +LRE+C  K    +++ KYQECNDRVN +SKT ETC EEL 
Sbjct: 9   VPVLKADDDEKE-LVDPQAALREKCQAKGHIASLYNKYQECNDRVNGKSKTTETCMEELF 67

Query: 175 DYVHVLDKCVTKDLFKRLK 119
           D+V  LD CV   LF +LK
Sbjct: 68  DFVAELDHCVAHSLFSKLK 86


>BT021290-1|AAX33438.1|  985|Drosophila melanogaster RE31401p protein.
          Length = 985

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 232  NDRVNSRSKTAETCEEELIDYVHVLDKCVTKDLFKRL-K**IENLNPNFKIIEAASVILM 56
            N +V   S  A+   EE   ++  L   VT+D F+R  K  +E  N  ++  +A   IL+
Sbjct: 892  NIKVEPSSSQAKEAPEERAAFLRELRSLVTQDQFRRFGKALLEYKNGTYESFQALMAILL 951


>AE014298-785|AAF46074.1|  985|Drosophila melanogaster CG4078-PA
            protein.
          Length = 985

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 232  NDRVNSRSKTAETCEEELIDYVHVLDKCVTKDLFKRL-K**IENLNPNFKIIEAASVILM 56
            N +V   S  A+   EE   ++  L   VT+D F+R  K  +E  N  ++  +A   IL+
Sbjct: 892  NIKVEPSSSQAKEAPEERAAFLRELRSLVTQDQFRRFGKALLEYKNGTYESFQALMAILL 951


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -1

Query: 310   DPQQSLREECSQKPD-AQNMWAKYQECND 227
             DP QS R EC +  D A N   + Q+C D
Sbjct: 12865 DPYQSCRPECVRHSDCASNKACQQQKCRD 12893


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,360,102
Number of Sequences: 53049
Number of extensions: 264533
Number of successful extensions: 673
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)