Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt12k22
         (672 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ989009-1|ABK88279.1|   81|Homo sapiens H+-ATPase e2 subunit pr...    60   5e-09
BX640846-1|CAE45916.1|  111|Homo sapiens hypothetical protein pr...    60   5e-09
AK098362-1|BAC05292.1|  217|Homo sapiens protein ( Homo sapiens ...    58   3e-08
Y15286-1|CAA75571.1|   81|Homo sapiens vacuolar proton-ATPase su...    57   7e-08
CR542131-1|CAG46928.1|   81|Homo sapiens ATP6V0E protein.              57   7e-08
CR456856-1|CAG33137.1|   81|Homo sapiens ATP6V0E protein.              57   7e-08
BC119715-1|AAI19716.1|   81|Homo sapiens ATPase, H+ transporting...    57   7e-08
BC119714-1|AAI19715.1|   81|Homo sapiens ATPase, H+ transporting...    57   7e-08

>DQ989009-1|ABK88279.1|   81|Homo sapiens H+-ATPase e2 subunit
           protein.
          Length = 81

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 24/51 (47%), Positives = 34/51 (66%)
 Frame = -1

Query: 639 KDQTEGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTW 487
           K    G+I  +L+ TA  C+LFWL A +AQ+NPL GP+L NET+ ++   W
Sbjct: 30  KGPNRGVIITMLVATAVCCYLFWLIAILAQLNPLFGPQLKNETIWYVRFLW 80


>BX640846-1|CAE45916.1|  111|Homo sapiens hypothetical protein
           protein.
          Length = 111

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 24/51 (47%), Positives = 34/51 (66%)
 Frame = -1

Query: 639 KDQTEGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTW 487
           K    G+I  +L+ TA  C+LFWL A +AQ+NPL GP+L NET+ ++   W
Sbjct: 60  KGPNRGVIITMLVATAVCCYLFWLIAILAQLNPLFGPQLKNETIWYVRFLW 110


>AK098362-1|BAC05292.1|  217|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25496 fis, clone CBR01585. ).
          Length = 217

 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 25/46 (54%), Positives = 32/46 (69%)
 Frame = -1

Query: 639 KDQTEGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIW 502
           K    G+I  +L+ TA  C+LFWL A +AQ+NPL GP+L NET IW
Sbjct: 60  KGPNRGVIITMLVATAVCCYLFWLIAILAQLNPLFGPQLKNET-IW 104


>Y15286-1|CAA75571.1|   81|Homo sapiens vacuolar proton-ATPase
           subunit M9.2 protein.
          Length = 81

 Score = 56.8 bits (131), Expect = 7e-08
 Identities = 22/51 (43%), Positives = 33/51 (64%)
 Frame = -1

Query: 639 KDQTEGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTW 487
           K    G+I  +L+  +  C+LFWL A +AQ+NPL GP+L NET+ ++   W
Sbjct: 30  KGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYHW 80


>CR542131-1|CAG46928.1|   81|Homo sapiens ATP6V0E protein.
          Length = 81

 Score = 56.8 bits (131), Expect = 7e-08
 Identities = 22/51 (43%), Positives = 33/51 (64%)
 Frame = -1

Query: 639 KDQTEGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTW 487
           K    G+I  +L+  +  C+LFWL A +AQ+NPL GP+L NET+ ++   W
Sbjct: 30  KGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYHW 80


>CR456856-1|CAG33137.1|   81|Homo sapiens ATP6V0E protein.
          Length = 81

 Score = 56.8 bits (131), Expect = 7e-08
 Identities = 22/51 (43%), Positives = 33/51 (64%)
 Frame = -1

Query: 639 KDQTEGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTW 487
           K    G+I  +L+  +  C+LFWL A +AQ+NPL GP+L NET+ ++   W
Sbjct: 30  KGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYHW 80


>BC119715-1|AAI19716.1|   81|Homo sapiens ATPase, H+ transporting,
           lysosomal 9kDa, V0 subunit e1 protein.
          Length = 81

 Score = 56.8 bits (131), Expect = 7e-08
 Identities = 22/51 (43%), Positives = 33/51 (64%)
 Frame = -1

Query: 639 KDQTEGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTW 487
           K    G+I  +L+  +  C+LFWL A +AQ+NPL GP+L NET+ ++   W
Sbjct: 30  KGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYHW 80


>BC119714-1|AAI19715.1|   81|Homo sapiens ATPase, H+ transporting,
           lysosomal 9kDa, V0 subunit e1 protein.
          Length = 81

 Score = 56.8 bits (131), Expect = 7e-08
 Identities = 22/51 (43%), Positives = 33/51 (64%)
 Frame = -1

Query: 639 KDQTEGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTW 487
           K    G+I  +L+  +  C+LFWL A +AQ+NPL GP+L NET+ ++   W
Sbjct: 30  KGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYHW 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,873,788
Number of Sequences: 237096
Number of extensions: 1790740
Number of successful extensions: 2636
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2635
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)