Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12k16
(721 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ292204-1|CAC24841.1| 514|Homo sapiens alanine-glyoxylate amin... 266 7e-71
AB193309-1|BAD66662.1| 514|Homo sapiens beta-alanine-pyruvate a... 266 7e-71
AK223375-1|BAD97095.1| 514|Homo sapiens alanine-glyoxylate amin... 265 9e-71
AK223128-1|BAD96848.1| 502|Homo sapiens alanine-glyoxylate amin... 265 9e-71
BC022526-1|AAH22526.1| 499|Homo sapiens alanine-glyoxylate amin... 198 1e-50
AK091888-1|BAC03766.1| 499|Homo sapiens protein ( Homo sapiens ... 198 1e-50
AJ298293-1|CAC22253.1| 493|Homo sapiens alanine:glyoxylate amin... 198 1e-50
AC097473-1|AAY40946.1| 499|Homo sapiens unknown protein. 198 1e-50
BC110335-1|AAI10336.1| 450|Homo sapiens alanine-glyoxylate amin... 182 2e-45
BC037567-1|AAH37567.1| 450|Homo sapiens alanine-glyoxylate amin... 182 2e-45
BC008009-1|AAH08009.1| 175|Homo sapiens alanine-glyoxylate amin... 122 2e-27
Y07511-1|CAA68809.1| 439|Homo sapiens protein ( Human mRNA for ... 105 2e-22
M29927-1|AAA59957.1| 439|Homo sapiens ornithine aminotransferas... 105 2e-22
M23204-1|AAA36386.1| 439|Homo sapiens ornithine-delta-aminotran... 105 2e-22
M14963-1|AAA59959.1| 439|Homo sapiens ornithine aminotransferas... 105 2e-22
M12267-1|AAA59956.1| 439|Homo sapiens ornithine aminotransferas... 105 2e-22
CR457045-1|CAG33326.1| 439|Homo sapiens OAT protein. 105 2e-22
BC016928-1|AAH16928.1| 439|Homo sapiens ornithine aminotransfer... 105 2e-22
BC000964-1|AAH00964.1| 439|Homo sapiens ornithine aminotransfer... 105 2e-22
AL445237-1|CAI17293.1| 439|Homo sapiens ornithine aminotransfer... 105 2e-22
AB208817-1|BAD92054.1| 281|Homo sapiens ornithine aminotransfer... 105 2e-22
U80226-1|AAB38510.1| 500|Homo sapiens gamma-aminobutyric acid t... 67 7e-11
S75578-1|AAD14176.1| 450|Homo sapiens 4-aminobutyrate aminotran... 67 7e-11
BC031413-1|AAH31413.1| 500|Homo sapiens 4-aminobutyrate aminotr... 67 7e-11
BC015628-1|AAH15628.1| 500|Homo sapiens 4-aminobutyrate aminotr... 67 7e-11
L32961-1|AAA74449.1| 500|Homo sapiens 4-aminobutyrate aminotran... 64 6e-10
X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3... 38 0.048
BX641155-1|CAE46068.1| 558|Homo sapiens hypothetical protein pr... 38 0.048
AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collage... 38 0.048
BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, ty... 37 0.084
AC112715-1|AAY14906.1| 588|Homo sapiens unknown protein. 37 0.084
AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein. 30 7.3
AK091195-1|BAC03605.1| 799|Homo sapiens protein ( Homo sapiens ... 30 7.3
BC130422-1|AAI30423.1| 2210|Homo sapiens mediator complex subuni... 30 9.6
BC029567-1|AAH29567.1| 507|Homo sapiens DNAH7 protein protein. 30 9.6
AY338463-1|AAR08418.1| 2210|Homo sapiens thyroid hormone recepto... 30 9.6
AL133033-1|CAB61363.1| 1908|Homo sapiens hypothetical protein pr... 30 9.6
AK023837-1|BAB14697.1| 1111|Homo sapiens nent TRAP240 mRNA. pro... 30 9.6
AF515599-1|AAQ08182.1| 2210|Homo sapiens PROSIT240 protein. 30 9.6
AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy ch... 30 9.6
AB028948-1|BAA82977.2| 1917|Homo sapiens KIAA1025 protein protein. 30 9.6
AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein. 30 9.6
>AJ292204-1|CAC24841.1| 514|Homo sapiens alanine-glyoxylate
aminotransferase 2 protein.
Length = 514
Score = 266 bits (651), Expect = 7e-71
Identities = 123/212 (58%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVVQ+PKG+LK+A EL++ GG+ +ADEVQTGFGR G HFWGF+TH V PDIVTMAKGIG
Sbjct: 294 GVVQYPKGFLKEAFELVRARGGVCIADEVQTGFGRLGSHFWGFQTHDVLPDIVTMAKGIG 353
Query: 539 NGFPLAAVVTTKEIAANHAKA-AYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
NGFP+AAV+TT EIA + AK +FNTFGGNPMA +G AVLEVI+EE LQ+NS+ VG Y
Sbjct: 354 NGFPMAAVITTPEIAKSLAKCLQHFNTFGGNPMACAIGSAVLEVIKEENLQENSQEVGTY 413
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTK-TPLTTSKVNDIHENIKDNGVLIAR 186
+ + L+ + ++GDVRG+GLMIG+E+V+ PL +VN IHE+ K G+L+ R
Sbjct: 414 MLLKFAKLRDEFEIVGDVRGKGLMIGIEMVQDKISCRPLPREEVNQIHEDCKHMGLLVGR 473
Query: 185 GGRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
G F+ FRI P MCITK +VDF + + A+
Sbjct: 474 GSIFSQTFRIAPSMCITKPEVDFAVEVFRSAL 505
>AB193309-1|BAD66662.1| 514|Homo sapiens beta-alanine-pyruvate
aminotransferase protein.
Length = 514
Score = 266 bits (651), Expect = 7e-71
Identities = 123/212 (58%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVVQ+PKG+LK+A EL++ GG+ +ADEVQTGFGR G HFWGF+TH V PDIVTMAKGIG
Sbjct: 294 GVVQYPKGFLKEAFELVRARGGVCIADEVQTGFGRLGSHFWGFQTHDVLPDIVTMAKGIG 353
Query: 539 NGFPLAAVVTTKEIAANHAKA-AYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
NGFP+AAV+TT EIA + AK +FNTFGGNPMA +G AVLEVI+EE LQ+NS+ VG Y
Sbjct: 354 NGFPMAAVITTPEIAKSLAKCLQHFNTFGGNPMACAIGSAVLEVIKEENLQENSQEVGTY 413
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTK-TPLTTSKVNDIHENIKDNGVLIAR 186
+ + L+ + ++GDVRG+GLMIG+E+V+ PL +VN IHE+ K G+L+ R
Sbjct: 414 MLLKFAKLRDEFEIVGDVRGKGLMIGIEMVQDKISCRPLPREEVNQIHEDCKHMGLLVGR 473
Query: 185 GGRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
G F+ FRI P MCITK +VDF + + A+
Sbjct: 474 GSIFSQTFRIAPSMCITKPEVDFAVEVFRSAL 505
>AK223375-1|BAD97095.1| 514|Homo sapiens alanine-glyoxylate
aminotransferase 2 precursor variant protein.
Length = 514
Score = 265 bits (650), Expect = 9e-71
Identities = 123/212 (58%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVVQ+PKG+LK+A EL++ GG+ +ADEVQTGFGR G HFWGF+TH V PDIVTMAKGIG
Sbjct: 294 GVVQYPKGFLKEAFELVRARGGVCIADEVQTGFGRLGSHFWGFQTHDVLPDIVTMAKGIG 353
Query: 539 NGFPLAAVVTTKEIAANHAKA-AYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
NGFP+AAV+TT EIA + AK +FNTFGGNPMA +G AVLEVI+EE LQ+NS+ VG Y
Sbjct: 354 NGFPMAAVITTPEIAKSLAKCLQHFNTFGGNPMACAIGSAVLEVIKEENLQENSQEVGTY 413
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTK-TPLTTSKVNDIHENIKDNGVLIAR 186
+ + L+ + ++GDVRG+GLMIG+E+V+ PL +VN IHE+ K G+L+ R
Sbjct: 414 MLLKFAKLRDEFEIVGDVRGKGLMIGIEMVQDKISCRPLPREEVNQIHEDCKHMGLLVGR 473
Query: 185 GGRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
G F+ FRI P MCITK +VDF + + A+
Sbjct: 474 GSIFSQTFRIAPSMCITKPEVDFALEVFRSAL 505
>AK223128-1|BAD96848.1| 502|Homo sapiens alanine-glyoxylate
aminotransferase 2 precursor variant protein.
Length = 502
Score = 265 bits (650), Expect = 9e-71
Identities = 123/212 (58%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVVQ+PKG+LK+A EL++ GG+ +ADEVQTGFGR G HFWGF+TH V PDIVTMAKGIG
Sbjct: 282 GVVQYPKGFLKEAFELVRARGGVCIADEVQTGFGRLGSHFWGFQTHDVLPDIVTMAKGIG 341
Query: 539 NGFPLAAVVTTKEIAANHAKA-AYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
NGFP+AAV+TT EIA + AK +FNTFGGNPMA +G AVLEVI+EE LQ+NS+ VG Y
Sbjct: 342 NGFPMAAVITTPEIAKSLAKCLQHFNTFGGNPMACAIGSAVLEVIKEENLQENSQEVGTY 401
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTK-TPLTTSKVNDIHENIKDNGVLIAR 186
+ + L+ + ++GDVRG+GLMIG+E+V+ PL +VN IHE+ K G+L+ R
Sbjct: 402 MLLKFAKLRDEFEIVGDVRGKGLMIGIEMVQDKISCRPLPREEVNQIHEDCKHMGLLVGR 461
Query: 185 GGRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
G F+ FRI P MCITK +VDF + + A+
Sbjct: 462 GSIFSQTFRIAPSMCITKPEVDFALEVFRSAL 493
>BC022526-1|AAH22526.1| 499|Homo sapiens alanine-glyoxylate
aminotransferase 2-like 1 protein.
Length = 499
Score = 198 bits (484), Expect = 1e-50
Identities = 96/200 (48%), Positives = 129/200 (64%), Gaps = 4/200 (2%)
Frame = -3
Query: 704 PKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVK--PDIVTMAKGIGNGF 531
P GY +K E + GG+++ADEVQ GFGR G HFW F+ +G PDIVTM K +GNG
Sbjct: 225 PAGYFQKVAEYVHGAGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGH 284
Query: 530 PLAAVVTTKEIAANHAKAA--YFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFI 357
P+A VVTTKEIA + + YFNT+GGNP++ VG AVL++IE E LQ N+K VG Y
Sbjct: 285 PVACVVTTKEIAEAFSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLT 344
Query: 356 RQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARGGR 177
L + +H +IGD+RG GL IG++LV+ K T++ I +K+ VL++ G
Sbjct: 345 ELLKKQKAKHTLIGDIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGP 404
Query: 176 FNNVFRIKPPMCITKQDVDF 117
NV +IKPPMC T++D F
Sbjct: 405 HRNVLKIKPPMCFTEEDAKF 424
>AK091888-1|BAC03766.1| 499|Homo sapiens protein ( Homo sapiens
cDNA FLJ34569 fis, clone KIDNE2008069, weakly similar to
PROBABLE AMINOTRANSFERASE T01B11.2 (EC 2.6.1.-). ).
Length = 499
Score = 198 bits (484), Expect = 1e-50
Identities = 96/200 (48%), Positives = 129/200 (64%), Gaps = 4/200 (2%)
Frame = -3
Query: 704 PKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVK--PDIVTMAKGIGNGF 531
P GY +K E + GG+++ADEVQ GFGR G HFW F+ +G PDIVTM K +GNG
Sbjct: 225 PAGYFQKVAEYVHGAGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGH 284
Query: 530 PLAAVVTTKEIAANHAKAA--YFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFI 357
P+A VVTTKEIA + + YFNT+GGNP++ VG AVL++IE E LQ N+K VG Y
Sbjct: 285 PVACVVTTKEIAEAFSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLT 344
Query: 356 RQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARGGR 177
L + +H +IGD+RG GL IG++LV+ K T++ I +K+ VL++ G
Sbjct: 345 ELLKKQKAKHTLIGDIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGP 404
Query: 176 FNNVFRIKPPMCITKQDVDF 117
NV +IKPPMC T++D F
Sbjct: 405 HRNVLKIKPPMCFTEEDAKF 424
>AJ298293-1|CAC22253.1| 493|Homo sapiens alanine:glyoxylate
aminotransferase 2 homolog 1, splice form 1 protein.
Length = 493
Score = 198 bits (484), Expect = 1e-50
Identities = 96/200 (48%), Positives = 129/200 (64%), Gaps = 4/200 (2%)
Frame = -3
Query: 704 PKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVK--PDIVTMAKGIGNGF 531
P GY +K E + GG+++ADEVQ GFGR G HFW F+ +G PDIVTM K +GNG
Sbjct: 219 PAGYFQKVAEYVHGAGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGH 278
Query: 530 PLAAVVTTKEIAANHAKAA--YFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFI 357
P+A VVTTKEIA + + YFNT+GGNP++ VG AVL++IE E LQ N+K VG Y
Sbjct: 279 PVACVVTTKEIAEAFSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLT 338
Query: 356 RQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARGGR 177
L + +H +IGD+RG GL IG++LV+ K T++ I +K+ VL++ G
Sbjct: 339 ELLKKQKAKHTLIGDIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGP 398
Query: 176 FNNVFRIKPPMCITKQDVDF 117
NV +IKPPMC T++D F
Sbjct: 399 HRNVLKIKPPMCFTEEDAKF 418
>AC097473-1|AAY40946.1| 499|Homo sapiens unknown protein.
Length = 499
Score = 198 bits (484), Expect = 1e-50
Identities = 96/200 (48%), Positives = 129/200 (64%), Gaps = 4/200 (2%)
Frame = -3
Query: 704 PKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVK--PDIVTMAKGIGNGF 531
P GY +K E + GG+++ADEVQ GFGR G HFW F+ +G PDIVTM K +GNG
Sbjct: 225 PAGYFQKVAEYVHGAGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGH 284
Query: 530 PLAAVVTTKEIAANHAKAA--YFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFI 357
P+A VVTTKEIA + + YFNT+GGNP++ VG AVL++IE E LQ N+K VG Y
Sbjct: 285 PVACVVTTKEIAEAFSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLT 344
Query: 356 RQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARGGR 177
L + +H +IGD+RG GL IG++LV+ K T++ I +K+ VL++ G
Sbjct: 345 ELLKKQKAKHTLIGDIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGP 404
Query: 176 FNNVFRIKPPMCITKQDVDF 117
NV +IKPPMC T++D F
Sbjct: 405 HRNVLKIKPPMCFTEEDAKF 424
>BC110335-1|AAI10336.1| 450|Homo sapiens alanine-glyoxylate
aminotransferase 2-like 2 protein.
Length = 450
Score = 182 bits (442), Expect = 2e-45
Identities = 94/196 (47%), Positives = 128/196 (65%), Gaps = 6/196 (3%)
Frame = -3
Query: 704 PKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVK--PDIVTMAKGIGNGF 531
P GY + E I+K GG++VADE+Q GFGR G HFW F+ G PDIVTM K IGNG
Sbjct: 225 PAGYFSQVAEHIRKAGGVFVADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGH 284
Query: 530 PLAAVVTTKEIA-ANHAKAA-YFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFI 357
P+A V T+ +A A A YFNTFGG+P++ VG AVL V+E+E LQ ++ VG F+
Sbjct: 285 PVACVAATQPVARAFEATGVEYFNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGS-FL 343
Query: 356 RQLMDLQK-QHPVIGDVRGQGLMIGVELV-EPGTKTPLTTSKVNDIHENIKDNGVLIARG 183
QL+ QK +HP++GDVRG GL IGV+L+ + T+TP T + + +K+N VL++
Sbjct: 344 MQLLGQQKIKHPIVGDVRGVGLFIGVDLIKDEATRTP-ATEEAAYLVSRLKENYVLLSTD 402
Query: 182 GRFNNVFRIKPPMCIT 135
G N+ + KPPMC +
Sbjct: 403 GPGRNILKFKPPMCFS 418
>BC037567-1|AAH37567.1| 450|Homo sapiens alanine-glyoxylate
aminotransferase 2-like 2 protein.
Length = 450
Score = 182 bits (442), Expect = 2e-45
Identities = 94/196 (47%), Positives = 128/196 (65%), Gaps = 6/196 (3%)
Frame = -3
Query: 704 PKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVK--PDIVTMAKGIGNGF 531
P GY + E I+K GG++VADE+Q GFGR G HFW F+ G PDIVTM K IGNG
Sbjct: 225 PAGYFSQVAEHIRKAGGVFVADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGH 284
Query: 530 PLAAVVTTKEIA-ANHAKAA-YFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFI 357
P+A V T+ +A A A YFNTFGG+P++ VG AVL V+E+E LQ ++ VG F+
Sbjct: 285 PVACVAATQPVARAFEATGVEYFNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGS-FL 343
Query: 356 RQLMDLQK-QHPVIGDVRGQGLMIGVELV-EPGTKTPLTTSKVNDIHENIKDNGVLIARG 183
QL+ QK +HP++GDVRG GL IGV+L+ + T+TP T + + +K+N VL++
Sbjct: 344 MQLLGQQKIKHPIVGDVRGVGLFIGVDLIKDEATRTP-ATEEAAYLVSRLKENYVLLSTD 402
Query: 182 GRFNNVFRIKPPMCIT 135
G N+ + KPPMC +
Sbjct: 403 GPGRNILKFKPPMCFS 418
>BC008009-1|AAH08009.1| 175|Homo sapiens alanine-glyoxylate
aminotransferase 2-like 2 protein.
Length = 175
Score = 122 bits (293), Expect = 2e-27
Identities = 66/145 (45%), Positives = 94/145 (64%), Gaps = 4/145 (2%)
Frame = -3
Query: 557 MAKGIGNGFPLAAVVTTKEIA-ANHAKAA-YFNTFGGNPMASTVGKAVLEVIEEEGLQQN 384
M K IGNG P+A V T+ +A A A YFNTFGG+P++ VG AVL V+E+E LQ +
Sbjct: 1 MGKSIGNGHPVACVAATQPVARAFEATGVEYFNTFGGSPVSCAVGLAVLNVLEKEQLQDH 60
Query: 383 SKVVGEYFIRQLMDLQK-QHPVIGDVRGQGLMIGVELV-EPGTKTPLTTSKVNDIHENIK 210
+ VG F+ QL+ QK +HP++GDVRG GL IGV+L+ + T+TP T + + +K
Sbjct: 61 ATSVGS-FLMQLLGQQKIKHPIVGDVRGVGLFIGVDLIKDEATRTP-ATEEAAYLVSRLK 118
Query: 209 DNGVLIARGGRFNNVFRIKPPMCIT 135
+N VL++ G N+ + KPPMC +
Sbjct: 119 ENYVLLSTDGPGRNILKFKPPMCFS 143
>Y07511-1|CAA68809.1| 439|Homo sapiens protein ( Human mRNA for
kidney ornithine aminotransferase (EC 2.6.1.13). ).
Length = 439
Score = 105 bits (251), Expect = 2e-22
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVV GYL +EL ++ L++ADE+QTG RTG + + V+PDIV + K +
Sbjct: 237 GVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG-RWLAVDYENVRPDIVLLGKALS 295
Query: 539 NG-FPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
G +P++AV+ +I + +T+GGNP+ V A LEV+EEE L +N+ +G
Sbjct: 296 GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 355
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARG 183
+LM L V+ VRG+GL+ + + E TK + ++DNG+L
Sbjct: 356 LRNELMKLPSD--VVTAVRGKGLLNAIVIKE--TK----DWDAWKVCLRLRDNGLLAK-- 405
Query: 182 GRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
++ R PP+ I + ++ I IIN I
Sbjct: 406 PTHGDIIRFAPPLVIKEDELRESIEIINKTI 436
>M29927-1|AAA59957.1| 439|Homo sapiens ornithine aminotransferase
protein.
Length = 439
Score = 105 bits (251), Expect = 2e-22
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVV GYL +EL ++ L++ADE+QTG RTG + + V+PDIV + K +
Sbjct: 237 GVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG-RWLAVDYENVRPDIVLLGKALS 295
Query: 539 NG-FPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
G +P++AV+ +I + +T+GGNP+ V A LEV+EEE L +N+ +G
Sbjct: 296 GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 355
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARG 183
+LM L V+ VRG+GL+ + + E TK + ++DNG+L
Sbjct: 356 LRNELMKLPSD--VVTAVRGKGLLNAIVIKE--TK----DWDAWKVCLRLRDNGLLAK-- 405
Query: 182 GRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
++ R PP+ I + ++ I IIN I
Sbjct: 406 PTHGDIIRFAPPLVIKEDELRESIEIINKTI 436
>M23204-1|AAA36386.1| 439|Homo sapiens
ornithine-delta-aminotransferase protein.
Length = 439
Score = 105 bits (251), Expect = 2e-22
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVV GYL +EL ++ L++ADE+QTG RTG + + V+PDIV + K +
Sbjct: 237 GVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG-RWLAVDYENVRPDIVLLGKALS 295
Query: 539 NG-FPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
G +P++AV+ +I + +T+GGNP+ V A LEV+EEE L +N+ +G
Sbjct: 296 GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 355
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARG 183
+LM L V+ VRG+GL+ + + E TK + ++DNG+L
Sbjct: 356 LRNELMKLPSD--VVTAVRGKGLLNAIVIKE--TK----DWDAWKVCLRLRDNGLLAK-- 405
Query: 182 GRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
++ R PP+ I + ++ I IIN I
Sbjct: 406 PTHGDIIRFAPPLVIKEDELRESIEIINKTI 436
>M14963-1|AAA59959.1| 439|Homo sapiens ornithine aminotransferase
protein.
Length = 439
Score = 105 bits (251), Expect = 2e-22
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVV GYL +EL ++ L++ADE+QTG RTG + + V+PDIV + K +
Sbjct: 237 GVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG-RWLAVDYENVRPDIVLLGKALS 295
Query: 539 NG-FPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
G +P++AV+ +I + +T+GGNP+ V A LEV+EEE L +N+ +G
Sbjct: 296 GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 355
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARG 183
+LM L V+ VRG+GL+ + + E TK + ++DNG+L
Sbjct: 356 LRNELMKLPSD--VVTAVRGKGLLNAIVIKE--TK----DWDAWKVCLRLRDNGLLAK-- 405
Query: 182 GRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
++ R PP+ I + ++ I IIN I
Sbjct: 406 PTHGDIIRFAPPLVIKEDELRESIEIINKTI 436
>M12267-1|AAA59956.1| 439|Homo sapiens ornithine aminotransferase
protein.
Length = 439
Score = 105 bits (251), Expect = 2e-22
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVV GYL +EL ++ L++ADE+QTG RTG + + V+PDIV + K +
Sbjct: 237 GVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG-RWLAVDYENVRPDIVLLGKALS 295
Query: 539 NG-FPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
G +P++AV+ +I + +T+GGNP+ V A LEV+EEE L +N+ +G
Sbjct: 296 GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 355
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARG 183
+LM L V+ VRG+GL+ + + E TK + ++DNG+L
Sbjct: 356 LRNELMKLPSD--VVTAVRGKGLLNAIVIKE--TK----DWDAWKVCLRLRDNGLLAK-- 405
Query: 182 GRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
++ R PP+ I + ++ I IIN I
Sbjct: 406 PTHGDIIRFAPPLVIKEDELRESIEIINKTI 436
>CR457045-1|CAG33326.1| 439|Homo sapiens OAT protein.
Length = 439
Score = 105 bits (251), Expect = 2e-22
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVV GYL +EL ++ L++ADE+QTG RTG + + V+PDIV + K +
Sbjct: 237 GVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG-RWLAVDYENVRPDIVLLGKALS 295
Query: 539 NG-FPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
G +P++AV+ +I + +T+GGNP+ V A LEV+EEE L +N+ +G
Sbjct: 296 GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 355
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARG 183
+LM L V+ VRG+GL+ + + E TK + ++DNG+L
Sbjct: 356 LRNELMKLPSD--VVTAVRGKGLLNAIVIKE--TK----DWDAWKVCLRLRDNGLLAK-- 405
Query: 182 GRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
++ R PP+ I + ++ I IIN I
Sbjct: 406 PTHGDIIRFAPPLVIKEDELRESIEIINKTI 436
>BC016928-1|AAH16928.1| 439|Homo sapiens ornithine aminotransferase
(gyrate atrophy) protein.
Length = 439
Score = 105 bits (251), Expect = 2e-22
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVV GYL +EL ++ L++ADE+QTG RTG + + V+PDIV + K +
Sbjct: 237 GVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG-RWLAVDYENVRPDIVLLGKALS 295
Query: 539 NG-FPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
G +P++AV+ +I + +T+GGNP+ V A LEV+EEE L +N+ +G
Sbjct: 296 GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 355
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARG 183
+LM L V+ VRG+GL+ + + E TK + ++DNG+L
Sbjct: 356 LRNELMKLPSD--VVTAVRGKGLLNAIVIKE--TK----DWDAWKVCLRLRDNGLLAK-- 405
Query: 182 GRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
++ R PP+ I + ++ I IIN I
Sbjct: 406 PTHGDIIRFAPPLVIKEDELRESIEIINKTI 436
>BC000964-1|AAH00964.1| 439|Homo sapiens ornithine aminotransferase
(gyrate atrophy) protein.
Length = 439
Score = 105 bits (251), Expect = 2e-22
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVV GYL +EL ++ L++ADE+QTG RTG + + V+PDIV + K +
Sbjct: 237 GVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG-RWLAVDYENVRPDIVLLGKALS 295
Query: 539 NG-FPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
G +P++AV+ +I + +T+GGNP+ V A LEV+EEE L +N+ +G
Sbjct: 296 GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 355
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARG 183
+LM L V+ VRG+GL+ + + E TK + ++DNG+L
Sbjct: 356 LRNELMKLPSD--VVTAVRGKGLLNAIVIKE--TK----DWDAWKVCLRLRDNGLLAK-- 405
Query: 182 GRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
++ R PP+ I + ++ I IIN I
Sbjct: 406 PTHGDIIRFAPPLVIKEDELRESIEIINKTI 436
>AL445237-1|CAI17293.1| 439|Homo sapiens ornithine aminotransferase
(gyrate atrophy) protein.
Length = 439
Score = 105 bits (251), Expect = 2e-22
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVV GYL +EL ++ L++ADE+QTG RTG + + V+PDIV + K +
Sbjct: 237 GVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG-RWLAVDYENVRPDIVLLGKALS 295
Query: 539 NG-FPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
G +P++AV+ +I + +T+GGNP+ V A LEV+EEE L +N+ +G
Sbjct: 296 GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 355
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARG 183
+LM L V+ VRG+GL+ + + E TK + ++DNG+L
Sbjct: 356 LRNELMKLPSD--VVTAVRGKGLLNAIVIKE--TK----DWDAWKVCLRLRDNGLLAK-- 405
Query: 182 GRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
++ R PP+ I + ++ I IIN I
Sbjct: 406 PTHGDIIRFAPPLVIKEDELRESIEIINKTI 436
>AB208817-1|BAD92054.1| 281|Homo sapiens ornithine aminotransferase
precursor variant protein.
Length = 281
Score = 105 bits (251), Expect = 2e-22
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Frame = -3
Query: 719 GVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG 540
GVV GYL +EL ++ L++ADE+QTG RTG + + V+PDIV + K +
Sbjct: 79 GVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG-RWLAVDYENVRPDIVLLGKALS 137
Query: 539 NG-FPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY 363
G +P++AV+ +I + +T+GGNP+ V A LEV+EEE L +N+ +G
Sbjct: 138 GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 197
Query: 362 FIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARG 183
+LM L V+ VRG+GL+ + + E TK + ++DNG+L
Sbjct: 198 LRNELMKLPSD--VVTAVRGKGLLNAIVIKE--TK----DWDAWKVCLRLRDNGLLAK-- 247
Query: 182 GRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
++ R PP+ I + ++ I IIN I
Sbjct: 248 PTHGDIIRFAPPLVIKEDELRESIEIINKTI 278
>U80226-1|AAB38510.1| 500|Homo sapiens gamma-aminobutyric acid
transaminase protein.
Length = 500
Score = 66.9 bits (156), Expect = 7e-11
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Frame = -3
Query: 695 YLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKP--DIVTMAKGIGNGFPLA 522
+ +K +++ +K+G ++ DEVQTG G TG FW E G+ D++T +K + G
Sbjct: 308 FFRKLRDIARKHGCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTG---- 362
Query: 521 AVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMD 342
+E N A FNT+ G+P + + V+ +I+ E L N+ G+ + L+D
Sbjct: 363 GFFHKEEFRPN-APYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLD 421
Query: 341 LQKQHP-VIGDVRGQGLMIGVELVEPGTKTPL 249
LQ ++P I VRG+G + + + L
Sbjct: 422 LQARYPQFISRVRGRGTFCSFDTPDDSIRNKL 453
>S75578-1|AAD14176.1| 450|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 450
Score = 66.9 bits (156), Expect = 7e-11
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Frame = -3
Query: 695 YLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKP--DIVTMAKGIGNGFPLA 522
+ +K +++ +K+G ++ DEVQTG G TG FW E G+ D++T +K + G
Sbjct: 273 FFRKLRDIARKHGCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTG---- 327
Query: 521 AVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMD 342
+E N A FNT+ G+P + + V+ +I+ E L N+ G+ + L+D
Sbjct: 328 GFFHKEEFRPN-APYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLD 386
Query: 341 LQKQHP-VIGDVRGQGLMIGVELVEPGTKTPL 249
LQ ++P I VRG+G + + + L
Sbjct: 387 LQARYPQFISRVRGRGTFCSFDTPDDSIRNKL 418
>BC031413-1|AAH31413.1| 500|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 500
Score = 66.9 bits (156), Expect = 7e-11
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Frame = -3
Query: 695 YLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKP--DIVTMAKGIGNGFPLA 522
+ +K +++ +K+G ++ DEVQTG G TG FW E G+ D++T +K + G
Sbjct: 308 FFRKLRDIARKHGCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTG---- 362
Query: 521 AVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMD 342
+E N A FNT+ G+P + + V+ +I+ E L N+ G+ + L+D
Sbjct: 363 GFFHKEEFRPN-APYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLD 421
Query: 341 LQKQHP-VIGDVRGQGLMIGVELVEPGTKTPL 249
LQ ++P I VRG+G + + + L
Sbjct: 422 LQARYPQFISRVRGRGTFCSFDTPDDSIRNKL 453
>BC015628-1|AAH15628.1| 500|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 500
Score = 66.9 bits (156), Expect = 7e-11
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Frame = -3
Query: 695 YLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKP--DIVTMAKGIGNGFPLA 522
+ +K +++ +K+G ++ DEVQTG G TG FW E G+ D++T +K + G
Sbjct: 308 FFRKLRDIARKHGCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTG---- 362
Query: 521 AVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMD 342
+E N A FNT+ G+P + + V+ +I+ E L N+ G+ + L+D
Sbjct: 363 GFFHKEEFRPN-APYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLD 421
Query: 341 LQKQHP-VIGDVRGQGLMIGVELVEPGTKTPL 249
LQ ++P I VRG+G + + + L
Sbjct: 422 LQARYPQFISRVRGRGTFCSFDTPDDSIRNKL 453
>L32961-1|AAA74449.1| 500|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 500
Score = 63.7 bits (148), Expect = 6e-10
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Frame = -3
Query: 695 YLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKP--DIVTMAKGIGNGFPLA 522
+ +K +++ +K+ ++ DEVQTG G TG FW E G+ D++T +K + G
Sbjct: 308 FFRKLRDIARKHCCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTG---- 362
Query: 521 AVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMD 342
+E N A FNT+ G+P + + V+ +I+ E L N+ G+ + L+D
Sbjct: 363 GFFLKEEFRPN-APYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLD 421
Query: 341 LQKQHP-VIGDVRGQGLMIGVELVEPGTKTPL 249
LQ ++P I VRG+G + + + L
Sbjct: 422 LQARYPQFISRVRGRGTFCSFDTPDDSIRNKL 453
>X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3
chain protein.
Length = 3176
Score = 37.5 bits (83), Expect = 0.048
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 508 VVTTAARGNPLPIPLAIVTMSGFTPCVSKPQK*SPVRPKPVCTSSATYKPP 660
V TT P+ I+ P +KP PV KPV T +AT +PP
Sbjct: 2883 VTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPVAAKPVATKTATVRPP 2933
>BX641155-1|CAE46068.1| 558|Homo sapiens hypothetical protein
protein.
Length = 558
Score = 37.5 bits (83), Expect = 0.048
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 508 VVTTAARGNPLPIPLAIVTMSGFTPCVSKPQK*SPVRPKPVCTSSATYKPP 660
V TT P+ I+ P +KP PV KPV T +AT +PP
Sbjct: 264 VTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPVAAKPVATKTATVRPP 314
>AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collagen
isoform 5 precursor variant protein.
Length = 1702
Score = 37.5 bits (83), Expect = 0.048
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 508 VVTTAARGNPLPIPLAIVTMSGFTPCVSKPQK*SPVRPKPVCTSSATYKPP 660
V TT P+ I+ P +KP PV KPV T +AT +PP
Sbjct: 1408 VTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPVAAKPVATKTATVRPP 1458
>BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, type
VI, alpha 3 protein.
Length = 979
Score = 36.7 bits (81), Expect = 0.084
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +1
Query: 508 VVTTAARGNPLPIPLAIVTMSGFTPCVSKPQK*SPVRPKPVCTSSATYKPP 660
V TT P+ I+ P +KP PV KPV T AT +PP
Sbjct: 685 VTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPVAAKPVATKMATVRPP 735
>AC112715-1|AAY14906.1| 588|Homo sapiens unknown protein.
Length = 588
Score = 36.7 bits (81), Expect = 0.084
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +1
Query: 508 VVTTAARGNPLPIPLAIVTMSGFTPCVSKPQK*SPVRPKPVCTSSATYKPP 660
V TT P+ I+ P +KP PV KPV T AT +PP
Sbjct: 294 VTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPVAAKPVATKMATVRPP 344
>AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein.
Length = 5058
Score = 30.3 bits (65), Expect = 7.3
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Frame = +3
Query: 135 SDAHWRFYSEYIIKASTTSDEHSVVF-DILMDIINFGSGQRCLSSG--FNKLHSDHEALS 305
S ++WR+++E I++ SDE F +I + +I G + L G FN L ++ + +
Sbjct: 1515 SQSNWRYFTELILRPIEMSDEIPNQFQNIWLHLITLGKEFQKLVKGIYFNILENNSSSKT 1574
Query: 306 PDIANHWVLLLKIHQLPDEVFADYLTVLLQSFFFNNLQYSFSNSRSHRVSTESVKVGSLR 485
++ N + K + + Y L S+ +L + NS +S E +K L
Sbjct: 1575 ENLLNIFATSPKEKDVNSVGNSIY---HLASYLAFSLSHDLQNSPKIIISPEIMKATGLG 1631
Query: 486 V 488
+
Sbjct: 1632 I 1632
>AK091195-1|BAC03605.1| 799|Homo sapiens protein ( Homo sapiens
cDNA FLJ33876 fis, clone CTONG2007009. ).
Length = 799
Score = 30.3 bits (65), Expect = 7.3
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Frame = +3
Query: 135 SDAHWRFYSEYIIKASTTSDEHSVVF-DILMDIINFGSGQRCLSSG--FNKLHSDHEALS 305
S ++WR+++E I++ SDE F +I + +I G + L G FN L ++ + +
Sbjct: 14 SQSNWRYFTELILRPIEMSDEIPNQFQNIWLHLITLGKEFQKLVKGIYFNILENNSSSKT 73
Query: 306 PDIANHWVLLLKIHQLPDEVFADYLTVLLQSFFFNNLQYSFSNSRSHRVSTESVKVGSLR 485
++ N + K + + Y L S+ +L + NS +S E +K L
Sbjct: 74 ENLLNIFATSPKEKDVNSVGNSIY---HLASYLAFSLSHDLQNSPKIIISPEIMKATGLG 130
Query: 486 V 488
+
Sbjct: 131 I 131
>BC130422-1|AAI30423.1| 2210|Homo sapiens mediator complex subunit
13-like protein.
Length = 2210
Score = 29.9 bits (64), Expect = 9.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 535 PLPIPLAIVTMSGFTPCVS-KPQK*SPVRPKPVCTSSATYKPPFFL 669
PLP + I +++GF P S + +P RP P+ Y PPF L
Sbjct: 1761 PLPTQIHIKSLTGFGPAASIEMTLKNPERPSPI----QLYSPPFIL 1802
>BC029567-1|AAH29567.1| 507|Homo sapiens DNAH7 protein protein.
Length = 507
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = -3
Query: 206 NGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIKKVVN*VCN 63
N VL+ GRFN + + C+ Q G+++++ +++VV+ + N
Sbjct: 265 NTVLVQEMGRFNKLLKTIRDSCVNIQKAIKGLAVMSTDLEEVVSSILN 312
>AY338463-1|AAR08418.1| 2210|Homo sapiens thyroid hormone
receptor-associated protein complex 240 kDa
component-like protein.
Length = 2210
Score = 29.9 bits (64), Expect = 9.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 535 PLPIPLAIVTMSGFTPCVS-KPQK*SPVRPKPVCTSSATYKPPFFL 669
PLP + I +++GF P S + +P RP P+ Y PPF L
Sbjct: 1761 PLPTQIHIKSLTGFGPAASIEMTLKNPERPSPI----QLYSPPFIL 1802
>AL133033-1|CAB61363.1| 1908|Homo sapiens hypothetical protein
protein.
Length = 1908
Score = 29.9 bits (64), Expect = 9.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 535 PLPIPLAIVTMSGFTPCVS-KPQK*SPVRPKPVCTSSATYKPPFFL 669
PLP + I +++GF P S + +P RP P+ Y PPF L
Sbjct: 1459 PLPTQIHIKSLTGFGPAASIEMTLKNPERPSPI----QLYSPPFIL 1500
>AK023837-1|BAB14697.1| 1111|Homo sapiens nent TRAP240 mRNA.
protein.
Length = 1111
Score = 29.9 bits (64), Expect = 9.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 535 PLPIPLAIVTMSGFTPCVS-KPQK*SPVRPKPVCTSSATYKPPFFL 669
PLP + I +++GF P S + +P RP P+ Y PPF L
Sbjct: 662 PLPTQIHIKSLTGFGPAASIEMTLKNPERPSPI----QLYSPPFIL 703
>AF515599-1|AAQ08182.1| 2210|Homo sapiens PROSIT240 protein.
Length = 2210
Score = 29.9 bits (64), Expect = 9.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 535 PLPIPLAIVTMSGFTPCVS-KPQK*SPVRPKPVCTSSATYKPPFFL 669
PLP + I +++GF P S + +P RP P+ Y PPF L
Sbjct: 1761 PLPTQIHIKSLTGFGPAASIEMTLKNPERPSPI----QLYSPPFIL 1802
>AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy chain 7
protein.
Length = 4024
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = -3
Query: 206 NGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIKKVVN*VCN 63
N VL+ GRFN + + C+ Q G+++++ +++VV+ + N
Sbjct: 3782 NTVLVQEMGRFNKLLKTIRDSCVNIQKAIKGLAVMSTDLEEVVSSILN 3829
>AB028948-1|BAA82977.2| 1917|Homo sapiens KIAA1025 protein protein.
Length = 1917
Score = 29.9 bits (64), Expect = 9.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 535 PLPIPLAIVTMSGFTPCVS-KPQK*SPVRPKPVCTSSATYKPPFFL 669
PLP + I +++GF P S + +P RP P+ Y PPF L
Sbjct: 1468 PLPTQIHIKSLTGFGPAASIEMTLKNPERPSPI----QLYSPPFIL 1509
>AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.
Length = 4031
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = -3
Query: 206 NGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIKKVVN*VCN 63
N VL+ GRFN + + C+ Q G+++++ +++VV+ + N
Sbjct: 3789 NTVLVQEMGRFNKLLKTIRDSCVNIQKAIKGLAVMSTDLEEVVSSILN 3836
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,755,488
Number of Sequences: 237096
Number of extensions: 2257289
Number of successful extensions: 5129
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 4830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5073
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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