Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12j19
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007955-1|AAH07955.1| 919|Homo sapiens dehydrogenase E1 and tr... 237 2e-62
BC002477-1|AAH02477.1| 919|Homo sapiens dehydrogenase E1 and tr... 237 2e-62
AB046850-1|BAB13456.1| 901|Homo sapiens KIAA1630 protein protein. 217 2e-56
BC014617-1|AAH14617.1| 1023|Homo sapiens oxoglutarate (alpha-ket... 159 1e-38
BC004964-1|AAH04964.1| 1023|Homo sapiens oxoglutarate (alpha-ket... 159 1e-38
AC004859-1|AAQ96885.1| 1023|Homo sapiens unknown protein. 159 1e-38
D10523-1|BAA01393.1| 1002|Homo sapiens 2-oxoglutarate dehydrogen... 155 2e-37
D32064-1|BAA06836.1| 1002|Homo sapiens 2-oxoglutarate dehydrogen... 153 7e-37
BC026320-1|AAH26320.1| 1010|Homo sapiens oxoglutarate dehydrogen... 150 4e-36
AK001713-1|BAA91855.1| 1010|Homo sapiens protein ( Homo sapiens ... 150 4e-36
AB033116-1|BAA86604.2| 1011|Homo sapiens KIAA1290 protein protein. 150 4e-36
AF521644-1|AAO16026.1| 715|Homo sapiens BBS7 long isoform protein. 31 4.7
AC079341-4|AAY40970.1| 715|Homo sapiens unknown protein. 31 4.7
>BC007955-1|AAH07955.1| 919|Homo sapiens dehydrogenase E1 and
transketolase domain containing 1 protein.
Length = 919
Score = 237 bits (580), Expect = 2e-62
Identities = 114/208 (54%), Positives = 141/208 (67%), Gaps = 2/208 (0%)
Frame = -2
Query: 644 EHSSCRLERFXQLTDSPESAPDSEAACXHVANPTTPAQYFHLLRRQVVRNYRKPLIIVAP 465
+HSSCR+ERF Q+ DS E D + V +PTTPAQYFHLLRRQ+VRN+RKPLI+ +P
Sbjct: 707 DHSSCRIERFLQMCDSAEEGVDGDTVNMFVVHPTTPAQYFHLLRRQMVRNFRKPLIVASP 766
Query: 464 KLLLRLADAVSPLSDFAPRTHFQPVIGDGLADALKVKRVIFVSGKHYYELHKER--VRAR 291
K+LLRL AVS L + AP T F PVIGD D KVK ++F SGKH+Y L K+R + A+
Sbjct: 767 KMLLRLPAAVSTLQEMAPGTTFNPVIGDSSVDPKKVKTLVFCSGKHFYSLVKQRESLGAK 826
Query: 290 LEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWSFMKPRFENLCGRK 111
D AI+RVE L PFPL LQ ++SKYK+ IWSQEE +NMG WSF+ PRFE K
Sbjct: 827 KHDFAIIRVEELCPFPLDSLQQEMSKYKHVKDHIWSQEEPQNMGPWSFVSPRFEKQLACK 886
Query: 110 LVYAGRSEAPTPAVGASSLHRVEVEHVL 27
L GR P PAVG ++H + E +L
Sbjct: 887 LRLVGRPPLPVPAVGIGTVHLHQHEDIL 914
>BC002477-1|AAH02477.1| 919|Homo sapiens dehydrogenase E1 and
transketolase domain containing 1 protein.
Length = 919
Score = 237 bits (580), Expect = 2e-62
Identities = 114/208 (54%), Positives = 141/208 (67%), Gaps = 2/208 (0%)
Frame = -2
Query: 644 EHSSCRLERFXQLTDSPESAPDSEAACXHVANPTTPAQYFHLLRRQVVRNYRKPLIIVAP 465
+HSSCR+ERF Q+ DS E D + V +PTTPAQYFHLLRRQ+VRN+RKPLI+ +P
Sbjct: 707 DHSSCRIERFLQMCDSAEEGVDGDTVNMFVVHPTTPAQYFHLLRRQMVRNFRKPLIVASP 766
Query: 464 KLLLRLADAVSPLSDFAPRTHFQPVIGDGLADALKVKRVIFVSGKHYYELHKER--VRAR 291
K+LLRL AVS L + AP T F PVIGD D KVK ++F SGKH+Y L K+R + A+
Sbjct: 767 KMLLRLPAAVSTLQEMAPGTTFNPVIGDSSVDPKKVKTLVFCSGKHFYSLVKQRESLGAK 826
Query: 290 LEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWSFMKPRFENLCGRK 111
D AI+RVE L PFPL LQ ++SKYK+ IWSQEE +NMG WSF+ PRFE K
Sbjct: 827 KHDFAIIRVEELCPFPLDSLQQEMSKYKHVKDHIWSQEEPQNMGPWSFVSPRFEKQLACK 886
Query: 110 LVYAGRSEAPTPAVGASSLHRVEVEHVL 27
L GR P PAVG ++H + E +L
Sbjct: 887 LRLVGRPPLPVPAVGIGTVHLHQHEDIL 914
>AB046850-1|BAB13456.1| 901|Homo sapiens KIAA1630 protein protein.
Length = 901
Score = 217 bits (531), Expect = 2e-56
Identities = 102/174 (58%), Positives = 125/174 (71%), Gaps = 2/174 (1%)
Frame = -2
Query: 644 EHSSCRLERFXQLTDSPESAPDSEAACXHVANPTTPAQYFHLLRRQVVRNYRKPLIIVAP 465
+HSSCR+ERF Q+ DS E D + V +PTTPAQYFHLLRRQ+VRN+RKPLI+ +P
Sbjct: 719 DHSSCRIERFLQMCDSAEEGVDGDTVNMFVVHPTTPAQYFHLLRRQMVRNFRKPLIVASP 778
Query: 464 KLLLRLADAVSPLSDFAPRTHFQPVIGDGLADALKVKRVIFVSGKHYYELHKER--VRAR 291
K+LLRL AVS L + AP T F PVIGD D KVK ++F SGKH+Y L K+R + A+
Sbjct: 779 KMLLRLPAAVSTLQEMAPGTTFNPVIGDSSVDPKKVKTLVFCSGKHFYSLVKQRESLGAK 838
Query: 290 LEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWSFMKPRFE 129
D AI+RVE L PFPL LQ ++SKYK+ IWSQEE +NMG WSF+ PRFE
Sbjct: 839 KHDFAIIRVEELCPFPLDSLQQEMSKYKHVKDHIWSQEEPQNMGPWSFVSPRFE 892
>BC014617-1|AAH14617.1| 1023|Homo sapiens oxoglutarate
(alpha-ketoglutarate) dehydrogenase (lipoamide) protein.
Length = 1023
Score = 159 bits (385), Expect = 1e-38
Identities = 94/223 (42%), Positives = 125/223 (56%), Gaps = 17/223 (7%)
Frame = -2
Query: 644 EHSSCRLERFXQL-TDSPESAPDSEAA---------CXHVA-NPTTPAQYFHLLRRQVVR 498
EHSS R ERF Q+ D P+ PD + A C V N +TP +FH+LRRQ++
Sbjct: 789 EHSSARPERFLQMCNDDPDVLPDLKEANFDINQLYDCNWVVVNCSTPGNFFHVLRRQILL 848
Query: 497 NYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI---GDGLADALKVKRVIFVSGKH 327
+RKPLII PK LLR +A S + P THFQ VI G + VKR++F +GK
Sbjct: 849 PFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFQRVIPEDGPAAQNPENVKRLLFCTGKV 908
Query: 326 YYELHKER-VRARLEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWS 150
YY+L +ER R + VAI R+E L+PFP L ++ KY NA + W QEEH+N G +
Sbjct: 909 YYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYD 967
Query: 149 FMKPRFENLCGR--KLVYAGRSEAPTPAVGASSLHRVEVEHVL 27
++KPR R + YAGR A PA G H E++ +L
Sbjct: 968 YVKPRLRTTISRAKPVWYAGRDPAAAPATGNKKTHLTELQRLL 1010
>BC004964-1|AAH04964.1| 1023|Homo sapiens oxoglutarate
(alpha-ketoglutarate) dehydrogenase (lipoamide) protein.
Length = 1023
Score = 159 bits (385), Expect = 1e-38
Identities = 94/223 (42%), Positives = 125/223 (56%), Gaps = 17/223 (7%)
Frame = -2
Query: 644 EHSSCRLERFXQL-TDSPESAPDSEAA---------CXHVA-NPTTPAQYFHLLRRQVVR 498
EHSS R ERF Q+ D P+ PD + A C V N +TP +FH+LRRQ++
Sbjct: 789 EHSSARPERFLQMCNDDPDVLPDLKEANFDINQLYDCNWVVVNCSTPGNFFHVLRRQILL 848
Query: 497 NYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI---GDGLADALKVKRVIFVSGKH 327
+RKPLII PK LLR +A S + P THFQ VI G + VKR++F +GK
Sbjct: 849 PFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFQRVIPEDGPAAQNPENVKRLLFCTGKV 908
Query: 326 YYELHKER-VRARLEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWS 150
YY+L +ER R + VAI R+E L+PFP L ++ KY NA + W QEEH+N G +
Sbjct: 909 YYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYD 967
Query: 149 FMKPRFENLCGR--KLVYAGRSEAPTPAVGASSLHRVEVEHVL 27
++KPR R + YAGR A PA G H E++ +L
Sbjct: 968 YVKPRLRTTISRAKPVWYAGRDPAAAPATGNKKTHLTELQRLL 1010
>AC004859-1|AAQ96885.1| 1023|Homo sapiens unknown protein.
Length = 1023
Score = 159 bits (385), Expect = 1e-38
Identities = 94/223 (42%), Positives = 125/223 (56%), Gaps = 17/223 (7%)
Frame = -2
Query: 644 EHSSCRLERFXQL-TDSPESAPDSEAA---------CXHVA-NPTTPAQYFHLLRRQVVR 498
EHSS R ERF Q+ D P+ PD + A C V N +TP +FH+LRRQ++
Sbjct: 789 EHSSARPERFLQMCNDDPDVLPDLKEANFDINQLYDCNWVVVNCSTPGNFFHVLRRQILL 848
Query: 497 NYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI---GDGLADALKVKRVIFVSGKH 327
+RKPLII PK LLR +A S + P THFQ VI G + VKR++F +GK
Sbjct: 849 PFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFQRVIPEDGPAAQNPENVKRLLFCTGKV 908
Query: 326 YYELHKER-VRARLEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWS 150
YY+L +ER R + VAI R+E L+PFP L ++ KY NA + W QEEH+N G +
Sbjct: 909 YYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYD 967
Query: 149 FMKPRFENLCGR--KLVYAGRSEAPTPAVGASSLHRVEVEHVL 27
++KPR R + YAGR A PA G H E++ +L
Sbjct: 968 YVKPRLRTTISRAKPVWYAGRDPAAAPATGNKKTHLTELQRLL 1010
>D10523-1|BAA01393.1| 1002|Homo sapiens 2-oxoglutarate dehydrogenase
precursor protein.
Length = 1002
Score = 155 bits (375), Expect = 2e-37
Identities = 92/215 (42%), Positives = 121/215 (56%), Gaps = 17/215 (7%)
Frame = -2
Query: 644 EHSSCRLERFXQL-TDSPESAPDSEAA---------CXHVA-NPTTPAQYFHLLRRQVVR 498
EHSS R ERF Q+ D P+ PD + A C V N +TP +FH+LRRQ++
Sbjct: 789 EHSSARPERFLQMCNDDPDVLPDLKEANFDINQLYDCNWVVVNCSTPGNFFHVLRRQILL 848
Query: 497 NYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI---GDGLADALKVKRVIFVSGKH 327
+RKPLII PK LLR +A S + P THFQ VI G + VKR++F +GK
Sbjct: 849 PFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFQRVIPEDGPAAQNPENVKRLLFCTGKV 908
Query: 326 YYELHKER-VRARLEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWS 150
YY+L +ER R + VAI R+E L+PFP L ++ KY NA + W QEEH+N G +
Sbjct: 909 YYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYD 967
Query: 149 FMKPRFENLCGR--KLVYAGRSEAPTPAVGASSLH 51
++KPR R + YAGR+ A PA G H
Sbjct: 968 YVKPRLRTTISRAKPVWYAGRNPAAAPATGNKKTH 1002
>D32064-1|BAA06836.1| 1002|Homo sapiens 2-oxoglutarate dehydrogenase
protein.
Length = 1002
Score = 153 bits (370), Expect = 7e-37
Identities = 91/215 (42%), Positives = 121/215 (56%), Gaps = 17/215 (7%)
Frame = -2
Query: 644 EHSSCRLERFXQL-TDSPESAPDSEAA---------CXHVA-NPTTPAQYFHLLRRQVVR 498
EHSS R ERF Q+ D P+ PD + A C V + +TP +FH+LRRQ++
Sbjct: 789 EHSSARPERFLQMCNDDPDVLPDLKEANFDINQLYDCNWVVVDCSTPGNFFHVLRRQILL 848
Query: 497 NYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI---GDGLADALKVKRVIFVSGKH 327
+RKPLII PK LLR +A S + P THFQ VI G + VKR++F +GK
Sbjct: 849 PFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFQRVIPEDGPAAQNPENVKRLLFCTGKV 908
Query: 326 YYELHKER-VRARLEDVAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWS 150
YY+L +ER R + VAI R+E L+PFP L ++ KY NA + W QEEH+N G +
Sbjct: 909 YYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYD 967
Query: 149 FMKPRFENLCGR--KLVYAGRSEAPTPAVGASSLH 51
++KPR R + YAGR+ A PA G H
Sbjct: 968 YVKPRLRTTISRAKPVWYAGRNPAAAPATGNKKTH 1002
>BC026320-1|AAH26320.1| 1010|Homo sapiens oxoglutarate
dehydrogenase-like protein.
Length = 1010
Score = 150 bits (364), Expect = 4e-36
Identities = 94/230 (40%), Positives = 130/230 (56%), Gaps = 16/230 (6%)
Frame = -2
Query: 644 EHSSCRLERFXQLTDS-----PESAPDSEAACXH-----VANPTTPAQYFHLLRRQVVRN 495
EHSS R ERF Q+++ P D E + + V N +TPA YFH+LRRQ++
Sbjct: 776 EHSSARPERFLQMSNDDSDAYPAFTKDFEVSQLYDCNWIVVNCSTPANYFHVLRRQILLP 835
Query: 494 YRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI-GDGLADAL--KVKRVIFVSGKHY 324
+RKPLII PK LLR +A S T FQ VI DG A +V+R+IF +GK Y
Sbjct: 836 FRKPLIIFTPKSLLRHPEAKSSFDQMVSGTSFQRVIPEDGAAARAPEQVQRLIFCTGKVY 895
Query: 323 YELHKERVRARLED-VAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWSF 147
Y+L KER LE+ VAI R+E ++PFP ++ + KY A + W QEEH+NMG + +
Sbjct: 896 YDLVKERSSQDLEEKVAITRLEQISPFPFDLIKQEAEKYPGA-ELAWCQEEHKNMGYYDY 954
Query: 146 MKPRFENLC--GRKLVYAGRSEAPTPAVGASSLHRVEVEHVLKEPLYNLK 3
+ PRF + R + Y GR A PA G + H V ++ L + +NL+
Sbjct: 955 ISPRFMTILRRARPIWYVGRDPAAAPATGNRNTHLVSLKKFL-DTAFNLQ 1003
>AK001713-1|BAA91855.1| 1010|Homo sapiens protein ( Homo sapiens cDNA
FLJ10851 fis, clone NT2RP4001483, moderately similar to
2-OXOGLUTARATE DEHYDROGENASE E1 COMPONENT PRECURSOR (EC
).
Length = 1010
Score = 150 bits (364), Expect = 4e-36
Identities = 94/230 (40%), Positives = 130/230 (56%), Gaps = 16/230 (6%)
Frame = -2
Query: 644 EHSSCRLERFXQLTDS-----PESAPDSEAACXH-----VANPTTPAQYFHLLRRQVVRN 495
EHSS R ERF Q+++ P D E + + V N +TPA YFH+LRRQ++
Sbjct: 776 EHSSARPERFLQMSNDDSDAYPAFTKDFEVSQLYDCNWIVVNCSTPANYFHVLRRQILLP 835
Query: 494 YRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI-GDGLADAL--KVKRVIFVSGKHY 324
+RKPLII PK LLR +A S T FQ VI DG A +V+R+IF +GK Y
Sbjct: 836 FRKPLIIFTPKSLLRHPEAKSSFDQMVSGTSFQRVIPEDGAAARAPEQVQRLIFCTGKVY 895
Query: 323 YELHKERVRARLED-VAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWSF 147
Y+L KER LE+ VAI R+E ++PFP ++ + KY A + W QEEH+NMG + +
Sbjct: 896 YDLVKERSSQDLEEKVAITRLEQISPFPFDLIKQEAEKYPGA-ELAWCQEEHKNMGYYDY 954
Query: 146 MKPRFENLC--GRKLVYAGRSEAPTPAVGASSLHRVEVEHVLKEPLYNLK 3
+ PRF + R + Y GR A PA G + H V ++ L + +NL+
Sbjct: 955 ISPRFMTILRRARPIWYVGRDPAAAPATGNRNTHLVSLKKFL-DTAFNLQ 1003
>AB033116-1|BAA86604.2| 1011|Homo sapiens KIAA1290 protein protein.
Length = 1011
Score = 150 bits (364), Expect = 4e-36
Identities = 94/230 (40%), Positives = 130/230 (56%), Gaps = 16/230 (6%)
Frame = -2
Query: 644 EHSSCRLERFXQLTDS-----PESAPDSEAACXH-----VANPTTPAQYFHLLRRQVVRN 495
EHSS R ERF Q+++ P D E + + V N +TPA YFH+LRRQ++
Sbjct: 777 EHSSARPERFLQMSNDDSDAYPAFTKDFEVSQLYDCNWIVVNCSTPANYFHVLRRQILLP 836
Query: 494 YRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVI-GDGLADAL--KVKRVIFVSGKHY 324
+RKPLII PK LLR +A S T FQ VI DG A +V+R+IF +GK Y
Sbjct: 837 FRKPLIIFTPKSLLRHPEAKSSFDQMVSGTSFQRVIPEDGAAARAPEQVQRLIFCTGKVY 896
Query: 323 YELHKERVRARLED-VAIVRVEALAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWSF 147
Y+L KER LE+ VAI R+E ++PFP ++ + KY A + W QEEH+NMG + +
Sbjct: 897 YDLVKERSSQDLEEKVAITRLEQISPFPFDLIKQEAEKYPGA-ELAWCQEEHKNMGYYDY 955
Query: 146 MKPRFENLC--GRKLVYAGRSEAPTPAVGASSLHRVEVEHVLKEPLYNLK 3
+ PRF + R + Y GR A PA G + H V ++ L + +NL+
Sbjct: 956 ISPRFMTILRRARPIWYVGRDPAAAPATGNRNTHLVSLKKFL-DTAFNLQ 1004
>AF521644-1|AAO16026.1| 715|Homo sapiens BBS7 long isoform protein.
Length = 715
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 264 HPHNGHVLQPRPHALLMQLVVMLTAYKDHPLHFQRISQTVTDYWLE 401
H N + L P H +L + + YK P H +R+ +TD +++
Sbjct: 635 HEGNTNFLIPEYHCILEEADHLQEEYKKQPAHLERLYGMITDLFID 680
>AC079341-4|AAY40970.1| 715|Homo sapiens unknown protein.
Length = 715
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 264 HPHNGHVLQPRPHALLMQLVVMLTAYKDHPLHFQRISQTVTDYWLE 401
H N + L P H +L + + YK P H +R+ +TD +++
Sbjct: 635 HEGNTNFLIPEYHCILEEADHLQEEYKKQPAHLERLYGMITDLFID 680
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,593,096
Number of Sequences: 237096
Number of extensions: 2012010
Number of successful extensions: 8831
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8796
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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