BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12j13
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC098261-1|AAH98261.1| 445|Homo sapiens C7orf10 protein protein. 163 7e-40
BC098117-1|AAH98117.1| 445|Homo sapiens C7orf10 protein protein. 163 7e-40
AB014767-1|BAB87807.1| 404|Homo sapiens DERP13 (dermal papilla ... 163 7e-40
BC098310-1|AAH98310.1| 397|Homo sapiens C7orf10 protein protein. 161 2e-39
BC098318-1|AAH98318.1| 471|Homo sapiens C7orf10 protein protein. 130 6e-30
AK021870-1|BAB13922.1| 434|Homo sapiens protein ( Homo sapiens ... 130 6e-30
AC004988-1|AAD26979.2| 91|Homo sapiens unknown protein. 82 2e-15
AC026866-1|AAS07506.1| 80|Homo sapiens unknown protein. 39 0.019
AC005160-1|AAS01999.1| 53|Homo sapiens unknown protein. 33 0.93
M62611-1|AAA59979.1| 85|Homo sapiens neurophysin protein. 31 5.0
M25650-1|AAA59977.1| 125|Homo sapiens oxytocin/neurophysin prot... 31 5.0
M11186-1|AAA98806.1| 124|Homo sapiens oxytocin-neurophysin I pr... 31 5.0
BC101843-1|AAI01844.1| 125|Homo sapiens oxytocin-neurophysin I,... 31 5.0
BC101841-1|AAI01842.1| 125|Homo sapiens oxytocin, prepro- (neur... 31 5.0
BC069144-1|AAH69144.1| 125|Homo sapiens oxytocin, prepro- (neur... 31 5.0
AY082910-1|AAL92860.1| 125|Homo sapiens prepro-oxytocin-neuroph... 31 5.0
AL160414-1|CAC10204.1| 125|Homo sapiens oxytocin, prepro-(neuro... 31 5.0
AY369208-1|AAQ73312.1| 956|Homo sapiens MAM domain-containing g... 30 8.7
AY358125-1|AAQ88492.1| 937|Homo sapiens MAM-domain protein prot... 30 8.7
AY328482-1|AAP97010.1| 571|Homo sapiens MAM domain containing 1... 30 8.7
>BC098261-1|AAH98261.1| 445|Homo sapiens C7orf10 protein protein.
Length = 445
Score = 163 bits (395), Expect = 7e-40
Identities = 79/193 (40%), Positives = 112/193 (58%)
Frame = -1
Query: 672 QISSMINIATIYLNCGVEGQRWGTAHANLVPYQAFKTKDGYMVIGTGSNPQFADFCKLIN 493
Q++ + +IA YL E +RWGTAH ++VPYQAFKTKDGY+V+G G+N QFA CK+++
Sbjct: 247 QVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTKDGYIVVGAGNNQQFATVCKILD 306
Query: 492 REDLITDERFKDNSNRVENRDEXXXXXXXXXXXXXSREWSALFKDATFPNGPINTMKDVF 313
+LI + ++K N RV NR E + +W LF+ + P GPIN MK+VF
Sbjct: 307 LPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVF 366
Query: 312 DDEHVKEIGLVKELQHTSAGTLKVVGPPTEFSEGGNLARTAPPTLGQHTTDILSDFLGYH 133
+ V GLV E++H + G + V GP +S+ PP LGQHTT IL + L Y
Sbjct: 367 AEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILKEVLRYD 426
Query: 132 ESKIQGLFEKNII 94
+ I L ++
Sbjct: 427 DRAIGELLSAGVV 439
>BC098117-1|AAH98117.1| 445|Homo sapiens C7orf10 protein protein.
Length = 445
Score = 163 bits (395), Expect = 7e-40
Identities = 79/193 (40%), Positives = 112/193 (58%)
Frame = -1
Query: 672 QISSMINIATIYLNCGVEGQRWGTAHANLVPYQAFKTKDGYMVIGTGSNPQFADFCKLIN 493
Q++ + +IA YL E +RWGTAH ++VPYQAFKTKDGY+V+G G+N QFA CK+++
Sbjct: 247 QVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTKDGYIVVGAGNNQQFATVCKILD 306
Query: 492 REDLITDERFKDNSNRVENRDEXXXXXXXXXXXXXSREWSALFKDATFPNGPINTMKDVF 313
+LI + ++K N RV NR E + +W LF+ + P GPIN MK+VF
Sbjct: 307 LPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVF 366
Query: 312 DDEHVKEIGLVKELQHTSAGTLKVVGPPTEFSEGGNLARTAPPTLGQHTTDILSDFLGYH 133
+ V GLV E++H + G + V GP +S+ PP LGQHTT IL + L Y
Sbjct: 367 AEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILKEVLRYD 426
Query: 132 ESKIQGLFEKNII 94
+ I L ++
Sbjct: 427 DRAIGELLSAGVV 439
>AB014767-1|BAB87807.1| 404|Homo sapiens DERP13 (dermal papilla
derived protein 13) protein.
Length = 404
Score = 163 bits (395), Expect = 7e-40
Identities = 79/193 (40%), Positives = 112/193 (58%)
Frame = -1
Query: 672 QISSMINIATIYLNCGVEGQRWGTAHANLVPYQAFKTKDGYMVIGTGSNPQFADFCKLIN 493
Q++ + +IA YL E +RWGTAH ++VPYQAFKTKDGY+V+G G+N QFA CK+++
Sbjct: 206 QVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTKDGYIVVGAGNNQQFATVCKILD 265
Query: 492 REDLITDERFKDNSNRVENRDEXXXXXXXXXXXXXSREWSALFKDATFPNGPINTMKDVF 313
+LI + ++K N RV NR E + +W LF+ + P GPIN MK+VF
Sbjct: 266 LPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVF 325
Query: 312 DDEHVKEIGLVKELQHTSAGTLKVVGPPTEFSEGGNLARTAPPTLGQHTTDILSDFLGYH 133
+ V GLV E++H + G + V GP +S+ PP LGQHTT IL + L Y
Sbjct: 326 AEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILKEVLRYD 385
Query: 132 ESKIQGLFEKNII 94
+ I L ++
Sbjct: 386 DRAIGELLSAGVV 398
>BC098310-1|AAH98310.1| 397|Homo sapiens C7orf10 protein protein.
Length = 397
Score = 161 bits (392), Expect = 2e-39
Identities = 78/193 (40%), Positives = 112/193 (58%)
Frame = -1
Query: 672 QISSMINIATIYLNCGVEGQRWGTAHANLVPYQAFKTKDGYMVIGTGSNPQFADFCKLIN 493
+++ + +IA YL E +RWGTAH ++VPYQAFKTKDGY+V+G G+N QFA CK+++
Sbjct: 199 EVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTKDGYIVVGAGNNQQFATVCKILD 258
Query: 492 REDLITDERFKDNSNRVENRDEXXXXXXXXXXXXXSREWSALFKDATFPNGPINTMKDVF 313
+LI + ++K N RV NR E + +W LF+ + P GPIN MK+VF
Sbjct: 259 LPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVF 318
Query: 312 DDEHVKEIGLVKELQHTSAGTLKVVGPPTEFSEGGNLARTAPPTLGQHTTDILSDFLGYH 133
+ V GLV E++H + G + V GP +S+ PP LGQHTT IL + L Y
Sbjct: 319 AEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILKEVLRYD 378
Query: 132 ESKIQGLFEKNII 94
+ I L ++
Sbjct: 379 DRAIGELLSAGVV 391
>BC098318-1|AAH98318.1| 471|Homo sapiens C7orf10 protein protein.
Length = 471
Score = 130 bits (313), Expect = 6e-30
Identities = 78/219 (35%), Positives = 109/219 (49%), Gaps = 26/219 (11%)
Frame = -1
Query: 672 QISSMINIATIYLNCGVEGQRWGTAHANLVPYQAFKTKDGYMVIGTGSNPQFADFCKLIN 493
Q++ + +IA YL E +RWGTAH ++VPYQAFKTKDGY+V+G G+N QFA CK+++
Sbjct: 247 QVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTKDGYIVVGAGNNQQFATVCKILD 306
Query: 492 REDLITDERFKDNSNRVENRDEXXXXXXXXXXXXXSREWSALFKDATFPNGPINTMKDVF 313
+LI + ++K N RV NR E + +W LF+ + P GPIN MK+VF
Sbjct: 307 LPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVF 366
Query: 312 DDE-----------HVKEIGLVKELQ---------------HTSAGTLKVVGPPTEFSEG 211
+ H G LQ H + G + V GP +S+
Sbjct: 367 AEPQNAVSGFQSLLHSLAHGPFLHLQGSARVLHNGLVMEMEHPTVGKISVPGPAVRYSKF 426
Query: 210 GNLARTAPPTLGQHTTDILSDFLGYHESKIQGLFEKNII 94
PP LGQHTT IL + L Y + I L ++
Sbjct: 427 KMSEARPPPLLGQHTTHILKEVLRYDDRAIGELLSAGVV 465
>AK021870-1|BAB13922.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ11808 fis, clone HEMBA1006291, weakly similar to
2-ARYLPROPIONYL-COA EPIMERASE (EC 5.-.-.-). ).
Length = 434
Score = 130 bits (313), Expect = 6e-30
Identities = 78/219 (35%), Positives = 109/219 (49%), Gaps = 26/219 (11%)
Frame = -1
Query: 672 QISSMINIATIYLNCGVEGQRWGTAHANLVPYQAFKTKDGYMVIGTGSNPQFADFCKLIN 493
Q++ + +IA YL E +RWGTAH ++VPYQAFKTKDGY+V+G G+N QFA CK+++
Sbjct: 210 QVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTKDGYIVVGAGNNQQFATVCKILD 269
Query: 492 REDLITDERFKDNSNRVENRDEXXXXXXXXXXXXXSREWSALFKDATFPNGPINTMKDVF 313
+LI + ++K N RV NR E + +W LF+ + P GPIN MK+VF
Sbjct: 270 LPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVF 329
Query: 312 DDE-----------HVKEIGLVKELQ---------------HTSAGTLKVVGPPTEFSEG 211
+ H G LQ H + G + V GP +S+
Sbjct: 330 AEPQNAVSGFQSLLHSLAHGPFLHLQGSARVLHNGLVMEMEHPTVGKISVPGPAVRYSKF 389
Query: 210 GNLARTAPPTLGQHTTDILSDFLGYHESKIQGLFEKNII 94
PP LGQHTT IL + L Y + I L ++
Sbjct: 390 KMSEARPPPLLGQHTTHILKEVLRYDDRAIGELLSAGVV 428
>AC004988-1|AAD26979.2| 91|Homo sapiens unknown protein.
Length = 91
Score = 82.2 bits (194), Expect = 2e-15
Identities = 38/87 (43%), Positives = 53/87 (60%)
Frame = -1
Query: 573 AFKTKDGYMVIGTGSNPQFADFCKLINREDLITDERFKDNSNRVENRDEXXXXXXXXXXX 394
AFKTKDGY+V+G G+N QFA CK+++ +LI + ++K N RV NR E
Sbjct: 1 AFKTKDGYIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEE 60
Query: 393 XXSREWSALFKDATFPNGPINTMKDVF 313
+ +W LF+ + P GPIN MK+VF
Sbjct: 61 ELTSKWLYLFEGSGVPYGPINNMKNVF 87
>AC026866-1|AAS07506.1| 80|Homo sapiens unknown protein.
Length = 80
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -1
Query: 672 QISSMINIATIYLNCGVEGQRWGTAHANLVPYQ 574
Q++ + +IA YL E +RWGTAH ++VPYQ
Sbjct: 48 QVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQ 80
>AC005160-1|AAS01999.1| 53|Homo sapiens unknown protein.
Length = 53
Score = 33.1 bits (72), Expect = 0.93
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 234 PPTEFSEGGNLARTAPPTLGQHTTDILSDFLGYHESKIQGLFEKNII 94
P +S+ PP LGQHTT IL + L Y + I L ++
Sbjct: 1 PAVRYSKFKMSEARPPPLLGQHTTHILKEVLRYDDRAIGELLSAGVV 47
>M62611-1|AAA59979.1| 85|Homo sapiens neurophysin protein.
Length = 85
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 151 G*NVCCMLAQCRGCSTG*VTTFAKLCWRTNYLQSPC 258
G N+CC A+ GC G T A C NYL SPC
Sbjct: 29 GPNICC--AEELGCFVG--TAEALRCQEENYLPSPC 60
>M25650-1|AAA59977.1| 125|Homo sapiens oxytocin/neurophysin
protein.
Length = 125
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 151 G*NVCCMLAQCRGCSTG*VTTFAKLCWRTNYLQSPC 258
G N+CC A+ GC G T A C NYL SPC
Sbjct: 54 GPNICC--AEELGCFVG--TAEALRCQEENYLPSPC 85
>M11186-1|AAA98806.1| 124|Homo sapiens oxytocin-neurophysin I
protein.
Length = 124
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 151 G*NVCCMLAQCRGCSTG*VTTFAKLCWRTNYLQSPC 258
G N+CC A+ GC G T A C NYL SPC
Sbjct: 54 GPNICC--AEELGCFVG--TAEALRCQEENYLPSPC 85
>BC101843-1|AAI01844.1| 125|Homo sapiens oxytocin-neurophysin I,
preproprotein protein.
Length = 125
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 151 G*NVCCMLAQCRGCSTG*VTTFAKLCWRTNYLQSPC 258
G N+CC A+ GC G T A C NYL SPC
Sbjct: 54 GPNICC--AEELGCFVG--TAEALRCQEENYLPSPC 85
>BC101841-1|AAI01842.1| 125|Homo sapiens oxytocin, prepro-
(neurophysin I) protein.
Length = 125
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 151 G*NVCCMLAQCRGCSTG*VTTFAKLCWRTNYLQSPC 258
G N+CC A+ GC G T A C NYL SPC
Sbjct: 54 GPNICC--AEELGCFVG--TAEALRCQEENYLPSPC 85
>BC069144-1|AAH69144.1| 125|Homo sapiens oxytocin, prepro-
(neurophysin I) protein.
Length = 125
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 151 G*NVCCMLAQCRGCSTG*VTTFAKLCWRTNYLQSPC 258
G N+CC A+ GC G T A C NYL SPC
Sbjct: 54 GPNICC--AEELGCFVG--TAEALRCQEENYLPSPC 85
>AY082910-1|AAL92860.1| 125|Homo sapiens
prepro-oxytocin-neurophysin I precursor protein.
Length = 125
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 151 G*NVCCMLAQCRGCSTG*VTTFAKLCWRTNYLQSPC 258
G N+CC A+ GC G T A C NYL SPC
Sbjct: 54 GPNICC--AEELGCFVG--TAEALRCQEENYLPSPC 85
>AL160414-1|CAC10204.1| 125|Homo sapiens oxytocin,
prepro-(neurophysin I) protein.
Length = 125
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 151 G*NVCCMLAQCRGCSTG*VTTFAKLCWRTNYLQSPC 258
G N+CC A+ GC G T A C NYL SPC
Sbjct: 54 GPNICC--AEELGCFVG--TAEALRCQEENYLPSPC 85
>AY369208-1|AAQ73312.1| 956|Homo sapiens MAM domain-containing
glycosylphosphatidylinositol anchor 2 protein.
Length = 956
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 642 IYLNCGVEGQRWGTAHANLVPYQAFK 565
++ + G +GQRW AH N+ P +F+
Sbjct: 867 LWSSSGNKGQRWNEAHVNIYPITSFQ 892
>AY358125-1|AAQ88492.1| 937|Homo sapiens MAM-domain protein
protein.
Length = 937
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 642 IYLNCGVEGQRWGTAHANLVPYQAFK 565
++ + G +GQRW AH N+ P +F+
Sbjct: 848 LWSSSGNKGQRWNEAHVNIYPITSFQ 873
>AY328482-1|AAP97010.1| 571|Homo sapiens MAM domain containing 1
protein.
Length = 571
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 642 IYLNCGVEGQRWGTAHANLVPYQAFK 565
++ + G +GQRW AH N+ P +F+
Sbjct: 482 LWSSSGNKGQRWNEAHVNIYPITSFQ 507
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,981,846
Number of Sequences: 237096
Number of extensions: 1942203
Number of successful extensions: 3086
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3086
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -