Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12j11
(312 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 23 0.65
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 1.1
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 2.0
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 22 2.0
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 2.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 20 6.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 20 6.0
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 20 6.0
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 20 6.0
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 20 6.0
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 20 6.0
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 20 6.0
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 20 6.0
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 20 6.0
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 20 6.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 20 6.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 20 6.0
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 20 8.0
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 20 8.0
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 20 8.0
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 23.4 bits (48), Expect = 0.65
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2
Query: 86 LKTTMFQYQGSDSYNCTHYSKRYYAI 163
LKT M + G Y+C+H +++ +
Sbjct: 25 LKTHMRLHTGEKPYHCSHCDRQFVQV 50
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.6 bits (46), Expect = 1.1
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Frame = -3
Query: 247 LIAKMFRLPFGERVD------PMEEKRQARENTINSVI 152
LIA +F +PF VD P KR + E+ I +++
Sbjct: 159 LIALIFAMPFATYVDINYVEYPQNSKRNSEESAICAML 196
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.8 bits (44), Expect = 2.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 279 KLKNNCF*QIS*SQKCSDCPLEK 211
K NNC + +KC +C L+K
Sbjct: 224 KYGNNCEIDMYMRRKCQECRLKK 246
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 21.8 bits (44), Expect = 2.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 279 KLKNNCF*QIS*SQKCSDCPLEK 211
K NNC + +KC +C L+K
Sbjct: 21 KYGNNCEIDMYMRRKCQECRLKK 43
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.4 bits (43), Expect = 2.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 236 FCD*LIC*KQLFFNFIYIALENKW 307
F D L+ + F+ IY LEN+W
Sbjct: 89 FADCLVGLVVMPFSAIYEVLENRW 112
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 119 DSYNCTHYSKRYYAIDSV 172
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 6.0
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = +2
Query: 101 FQYQGSDSYNCTHYSKRYY 157
+ Y +YN +Y+K+ Y
Sbjct: 98 YNYNNKYNYNNNNYNKKLY 116
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 119 DSYNCTHYSKRYYAIDSV 172
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 119 DSYNCTHYSKRYYAIDSV 172
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 119 DSYNCTHYSKRYYAIDSV 172
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 119 DSYNCTHYSKRYYAIDSV 172
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 119 DSYNCTHYSKRYYAIDSV 172
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 119 DSYNCTHYSKRYYAIDSV 172
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 119 DSYNCTHYSKRYYAIDSV 172
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 119 DSYNCTHYSKRYYAIDSV 172
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 6.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 119 DSYNCTHYSKRYYAIDSV 172
++YN +Y+K YY I+ +
Sbjct: 332 NNYNKHNYNKLYYNINYI 349
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 6.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 119 DSYNCTHYSKRYYAIDSV 172
++YN +Y+K YY I+ +
Sbjct: 332 NNYNKHNYNKLYYNINYI 349
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.8 bits (39), Expect = 8.0
Identities = 5/10 (50%), Positives = 9/10 (90%)
Frame = -1
Query: 240 QKCSDCPLEK 211
Q+C++CP+ K
Sbjct: 260 QECTECPIGK 269
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 19.8 bits (39), Expect = 8.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 125 YNCTHYSKRYYAIDSV 172
YN +Y K YY I+ +
Sbjct: 318 YNNNNYKKLYYNINYI 333
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 19.8 bits (39), Expect = 8.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 296 LMQYR*N*KIIVSSKLVNRKN 234
L+ + N I+ SKLVN++N
Sbjct: 506 LINFSKNNTIVDISKLVNKRN 526
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,950
Number of Sequences: 438
Number of extensions: 1343
Number of successful extensions: 22
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6595479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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