SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt12i06
         (628 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000819-1|AAH00819.1|  290|Homo sapiens CCBL2 protein protein.       153   5e-37
AY028624-1|AAK26163.1|  454|Homo sapiens kynurenine aminotransfe...   153   5e-37
AL445991-7|CAI41345.1|  420|Homo sapiens cysteine conjugate-beta...   153   5e-37
X82224-1|CAA57702.1|  422|Homo sapiens glutamine--phenylpyruvate...   135   1e-31
BC033685-1|AAH33685.1|  374|Homo sapiens CCBL1 protein protein.       135   1e-31
AL441992-15|CAI15415.1|  372|Homo sapiens cysteine conjugate-bet...   135   1e-31
AL441992-14|CAI15414.1|  422|Homo sapiens cysteine conjugate-bet...   135   1e-31
CR450282-1|CAG29278.1|  175|Homo sapiens LOC56267 protein.             91   3e-18
AF091090-1|AAC72959.1|  175|Homo sapiens unknown protein.              91   3e-18
Y17448-1|CAB44343.1|   48|Homo sapiens cysteine conjugate beta-l...    33   1.1  
AK128065-1|BAC87257.1|  821|Homo sapiens protein ( Homo sapiens ...    31   3.3  
BC115376-1|AAI15377.1|  954|Homo sapiens C2orf16 protein protein.      30   7.7  
BC112350-1|AAI12351.1|  955|Homo sapiens THRAP3 protein protein.       30   7.7  
BC112330-1|AAI12331.1|  955|Homo sapiens thyroid hormone recepto...    30   7.7  
BC065519-1|AAH65519.1|  374|Homo sapiens THRAP3 protein protein.       30   7.7  
BC054046-1|AAH54046.1|  373|Homo sapiens THRAP3 protein protein.       30   7.7  
BC037554-1|AAH37554.1|  672|Homo sapiens THRAP3 protein protein.       30   7.7  
BC019076-1|AAH19076.1|  373|Homo sapiens Unknown (protein for IM...    30   7.7  
BC010997-1|AAH10997.1|  375|Homo sapiens THRAP3 protein protein.       30   7.7  
BC002501-1|AAH02501.1|  375|Homo sapiens THRAP3 protein protein.       30   7.7  
AL834384-1|CAD39047.1|  845|Homo sapiens hypothetical protein pr...    30   7.7  
AL591845-1|CAH71859.1|  955|Homo sapiens thyroid hormone recepto...    30   7.7  
AF117756-1|AAD22034.1|  955|Homo sapiens thyroid hormone recepto...    30   7.7  
AC074091-7|AAX93198.1|  939|Homo sapiens unknown protein.              30   7.7  

>BC000819-1|AAH00819.1|  290|Homo sapiens CCBL2 protein protein.
          Length = 290

 Score =  153 bits (371), Expect = 5e-37
 Identities = 75/162 (46%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
 Frame = -2

Query: 627 TVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSFEYELARRD 448
           T+GSAGKTFSVTGWK+GW+ GP  L+++LQ V QN +YTC TP++EA+A++F  ++ R D
Sbjct: 110 TIGSAGKTFSVTGWKLGWSIGPNHLIKHLQTVQQNTIYTCATPLQEALAQAFWIDIKRMD 169

Query: 447 SPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKIDLSSELXXX 268
            P+CYF SL +EL  KRD ++++L+  G KP +P+ GYF++AD + L+   DLS      
Sbjct: 170 DPECYFNSLPKELEVKRDRMVRLLESVGLKPIVPDGGYFIIADVSLLDP--DLSDMKNNE 227

Query: 267 XXXXXXXXXXKEAGVL-AIPPSAFYSEAHKHLGETFARFCFI 145
                      +   L AIP SAF +   K   E F RFCFI
Sbjct: 228 PYDYKFVKWMTKHKKLSAIPVSAFCNSETKSQFEKFVRFCFI 269


>AY028624-1|AAK26163.1|  454|Homo sapiens kynurenine
           aminotransferase III protein.
          Length = 454

 Score =  153 bits (371), Expect = 5e-37
 Identities = 75/162 (46%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
 Frame = -2

Query: 627 TVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSFEYELARRD 448
           T+GSAGKTFSVTGWK+GW+ GP  L+++LQ V QN +YTC TP++EA+A++F  ++ R D
Sbjct: 274 TIGSAGKTFSVTGWKLGWSIGPNHLIKHLQTVQQNTIYTCATPLQEALAQAFWIDIKRMD 333

Query: 447 SPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKIDLSSELXXX 268
            P+CYF SL +EL  KRD ++++L+  G KP +P+ GYF++AD + L+   DLS      
Sbjct: 334 DPECYFNSLPKELEVKRDRMVRLLESVGLKPIVPDGGYFIIADVSLLDP--DLSDMKNNE 391

Query: 267 XXXXXXXXXXKEAGVL-AIPPSAFYSEAHKHLGETFARFCFI 145
                      +   L AIP SAF +   K   E F RFCFI
Sbjct: 392 PYDYKFVKWMTKHKKLSAIPVSAFCNSETKSQFEKFVRFCFI 433


>AL445991-7|CAI41345.1|  420|Homo sapiens cysteine conjugate-beta
           lyase 2 protein.
          Length = 420

 Score =  153 bits (371), Expect = 5e-37
 Identities = 75/162 (46%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
 Frame = -2

Query: 627 TVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSFEYELARRD 448
           T+GSAGKTFSVTGWK+GW+ GP  L+++LQ V QN +YTC TP++EA+A++F  ++ R D
Sbjct: 240 TIGSAGKTFSVTGWKLGWSIGPNHLIKHLQTVQQNTIYTCATPLQEALAQAFWIDIKRMD 299

Query: 447 SPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKIDLSSELXXX 268
            P+CYF SL +EL  KRD ++++L+  G KP +P+ GYF++AD + L+   DLS      
Sbjct: 300 DPECYFNSLPKELEVKRDRMVRLLESVGLKPIVPDGGYFIIADVSLLDP--DLSDMKNNE 357

Query: 267 XXXXXXXXXXKEAGVL-AIPPSAFYSEAHKHLGETFARFCFI 145
                      +   L AIP SAF +   K   E F RFCFI
Sbjct: 358 PYDYKFVKWMTKHKKLSAIPVSAFCNSETKSQFEKFVRFCFI 399


>X82224-1|CAA57702.1|  422|Homo sapiens glutamine--phenylpyruvate
           aminotransferase protein.
          Length = 422

 Score =  135 bits (326), Expect = 1e-31
 Identities = 64/162 (39%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
 Frame = -2

Query: 627 TVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSFEYELARRD 448
           T+GSAGKTFS TGWK+GW  GP  +M++L+ VHQN V+ C T  + AVA SFE E     
Sbjct: 241 TIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFR 300

Query: 447 SPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKI-DLSSELXX 271
            P  YF    + ++  RD++++ L+  G KP +P+  YF++ D +D ++K+ DL   +  
Sbjct: 301 QPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDE 360

Query: 270 XXXXXXXXXXXKEAGVLAIPPSAFYSEAHKHLGETFARFCFI 145
                      K  G++AIP S FYS  H+   + + RFCF+
Sbjct: 361 PYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV 402


>BC033685-1|AAH33685.1|  374|Homo sapiens CCBL1 protein protein.
          Length = 374

 Score =  135 bits (326), Expect = 1e-31
 Identities = 64/162 (39%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
 Frame = -2

Query: 627 TVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSFEYELARRD 448
           T+GSAGKTFS TGWK+GW  GP  +M++L+ VHQN V+ C T  + AVA SFE E     
Sbjct: 191 TIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFR 250

Query: 447 SPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKI-DLSSELXX 271
            P  YF    + ++  RD++++ L+  G KP +P+  YF++ D +D ++K+ DL   +  
Sbjct: 251 QPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDE 310

Query: 270 XXXXXXXXXXXKEAGVLAIPPSAFYSEAHKHLGETFARFCFI 145
                      K  G++AIP S FYS  H+   + + RFCF+
Sbjct: 311 PYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV 352


>AL441992-15|CAI15415.1|  372|Homo sapiens cysteine conjugate-beta
           lyase; cytoplasmic (glutamine transaminase K, kyneureni
           protein.
          Length = 372

 Score =  135 bits (326), Expect = 1e-31
 Identities = 64/162 (39%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
 Frame = -2

Query: 627 TVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSFEYELARRD 448
           T+GSAGKTFS TGWK+GW  GP  +M++L+ VHQN V+ C T  + AVA SFE E     
Sbjct: 191 TIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFR 250

Query: 447 SPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKI-DLSSELXX 271
            P  YF    + ++  RD++++ L+  G KP +P+  YF++ D +D ++K+ DL   +  
Sbjct: 251 QPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDE 310

Query: 270 XXXXXXXXXXXKEAGVLAIPPSAFYSEAHKHLGETFARFCFI 145
                      K  G++AIP S FYS  H+   + + RFCF+
Sbjct: 311 PYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV 352


>AL441992-14|CAI15414.1|  422|Homo sapiens cysteine conjugate-beta
           lyase; cytoplasmic (glutamine transaminase K, kyneureni
           protein.
          Length = 422

 Score =  135 bits (326), Expect = 1e-31
 Identities = 64/162 (39%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
 Frame = -2

Query: 627 TVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSFEYELARRD 448
           T+GSAGKTFS TGWK+GW  GP  +M++L+ VHQN V+ C T  + AVA SFE E     
Sbjct: 241 TIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFR 300

Query: 447 SPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKI-DLSSELXX 271
            P  YF    + ++  RD++++ L+  G KP +P+  YF++ D +D ++K+ DL   +  
Sbjct: 301 QPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDE 360

Query: 270 XXXXXXXXXXXKEAGVLAIPPSAFYSEAHKHLGETFARFCFI 145
                      K  G++AIP S FYS  H+   + + RFCF+
Sbjct: 361 PYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV 402


>CR450282-1|CAG29278.1|  175|Homo sapiens LOC56267 protein.
          Length = 175

 Score = 91.1 bits (216), Expect = 3e-18
 Identities = 36/62 (58%), Positives = 50/62 (80%)
 Frame = -2

Query: 627 TVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSFEYELARRD 448
           T+GSAGKTFSVTGWK+GW+ GP  L+++LQ V QN +YTC TP++EA+A++F  ++ R D
Sbjct: 110 TIGSAGKTFSVTGWKLGWSIGPNHLIKHLQTVQQNTIYTCATPLQEALAQAFWIDIKRMD 169

Query: 447 SP 442
            P
Sbjct: 170 DP 171


>AF091090-1|AAC72959.1|  175|Homo sapiens unknown protein.
          Length = 175

 Score = 91.1 bits (216), Expect = 3e-18
 Identities = 36/62 (58%), Positives = 50/62 (80%)
 Frame = -2

Query: 627 TVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSFEYELARRD 448
           T+GSAGKTFSVTGWK+GW+ GP  L+++LQ V QN +YTC TP++EA+A++F  ++ R D
Sbjct: 110 TIGSAGKTFSVTGWKLGWSIGPNHLIKHLQTVQQNTIYTCATPLQEALAQAFWIDIKRMD 169

Query: 447 SP 442
            P
Sbjct: 170 DP 171


>Y17448-1|CAB44343.1|   48|Homo sapiens cysteine conjugate
           beta-lyase protein.
          Length = 48

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 228 GVLAIPPSAFYSEAHKHLGETFARFCFI 145
           G++AIP S FYS  H+   + + RFCF+
Sbjct: 1   GLVAIPVSIFYSVPHQKHFDHYIRFCFV 28


>AK128065-1|BAC87257.1|  821|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46185 fis, clone TESTI4004917, moderately
           similar to Dynein beta chain, ciliary. ).
          Length = 821

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 542 CKWYTRTVCTRAARRSRKPWPARSSTSW 459
           C W   +  +R++R S  PWP R+S  W
Sbjct: 786 CGWPASSTPSRSSRPSCSPWPGRTSGPW 813


>BC115376-1|AAI15377.1|  954|Homo sapiens C2orf16 protein protein.
          Length = 954

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
 Frame = -3

Query: 299 RSTYRANWTNTKITS--SQRNSLKRRAYSPYRR---APSTLKHTN 180
           R+ +  +W N +  S  SQR+SL+RR +SP +R   +PS   H++
Sbjct: 526 RTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCSPSRKNHSS 570


>BC112350-1|AAI12351.1|  955|Homo sapiens THRAP3 protein protein.
          Length = 955

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 290 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 156
           YR+NW N +   S R   + R+ SP RR+PS  +  H+    + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152


>BC112330-1|AAI12331.1|  955|Homo sapiens thyroid hormone receptor
           associated protein 3 protein.
          Length = 955

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 290 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 156
           YR+NW N +   S R   + R+ SP RR+PS  +  H+    + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152


>BC065519-1|AAH65519.1|  374|Homo sapiens THRAP3 protein protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 290 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 156
           YR+NW N +   S R   + R+ SP RR+PS  +  H+    + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152


>BC054046-1|AAH54046.1|  373|Homo sapiens THRAP3 protein protein.
          Length = 373

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 290 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 156
           YR+NW N +   S R   + R+ SP RR+PS  +  H+    + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152


>BC037554-1|AAH37554.1|  672|Homo sapiens THRAP3 protein protein.
          Length = 672

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 290 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 156
           YR+NW N +   S R   + R+ SP RR+PS  +  H+    + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152


>BC019076-1|AAH19076.1|  373|Homo sapiens Unknown (protein for
           IMAGE:3834482) protein.
          Length = 373

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 290 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 156
           YR+NW N +   S R   + R+ SP RR+PS  +  H+    + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152


>BC010997-1|AAH10997.1|  375|Homo sapiens THRAP3 protein protein.
          Length = 375

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 290 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 156
           YR+NW N +   S R   + R+ SP RR+PS  +  H+    + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152


>BC002501-1|AAH02501.1|  375|Homo sapiens THRAP3 protein protein.
          Length = 375

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 290 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 156
           YR+NW N +   S R   + R+ SP RR+PS  +  H+    + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152


>AL834384-1|CAD39047.1|  845|Homo sapiens hypothetical protein
           protein.
          Length = 845

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
 Frame = -3

Query: 299 RSTYRANWTNTKITS--SQRNSLKRRAYSPYRR---APSTLKHTN 180
           R+ +  +W N +  S  SQR+SL+RR +SP +R   +PS   H++
Sbjct: 417 RTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCSPSRKNHSS 461


>AL591845-1|CAH71859.1|  955|Homo sapiens thyroid hormone receptor
           associated protein 3 protein.
          Length = 955

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 290 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 156
           YR+NW N +   S R   + R+ SP RR+PS  +  H+    + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152


>AF117756-1|AAD22034.1|  955|Homo sapiens thyroid hormone
           receptor-associated protein complex component TRAP150
           protein.
          Length = 955

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 290 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 156
           YR+NW N +   S R   + R+ SP RR+PS  +  H+    + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152


>AC074091-7|AAX93198.1|  939|Homo sapiens unknown protein.
          Length = 939

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
 Frame = -3

Query: 299 RSTYRANWTNTKITS--SQRNSLKRRAYSPYRR---APSTLKHTN 180
           R+ +  +W N +  S  SQR+SL+RR +SP +R   +PS   H++
Sbjct: 511 RTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCSPSRKNHSS 555


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,346,714
Number of Sequences: 237096
Number of extensions: 1667796
Number of successful extensions: 6572
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6565
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -