Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12f21
(630 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 2.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 5.7
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 5.7
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 5.7
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 5.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 5.7
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 7.5
U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein. 21 9.9
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 9.9
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 9.9
AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor pro... 21 9.9
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 9.9
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/22 (31%), Positives = 10/22 (45%)
Frame = -1
Query: 582 GKCYCADGFVPNQFHDRCVPCP 517
G C+C G+ + C CP
Sbjct: 245 GGCHCKPGYQADVEKQECTECP 266
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 2.4
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -1
Query: 198 RDAPPRYSRTPTTDIAVYPAIAYLNSGFIHDSSIPPPP 85
R P R R PT D++ P+ N + PP P
Sbjct: 1363 RPVPERPERVPTVDLSPSPSDRGRNDDGSDRLTSPPTP 1400
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 5.7
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -3
Query: 202 ITGCTTKVFQDTNNGYSRVSSYSIS 128
I+ + K + NN Y ++ Y+I+
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 5.7
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -3
Query: 202 ITGCTTKVFQDTNNGYSRVSSYSIS 128
I+ + K + NN Y ++ Y+I+
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 5.7
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -3
Query: 202 ITGCTTKVFQDTNNGYSRVSSYSIS 128
I+ + K + NN Y ++ Y+I+
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 5.7
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -3
Query: 202 ITGCTTKVFQDTNNGYSRVSSYSIS 128
I+ + K + NN Y ++ Y+I+
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNIN 106
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 5.7
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -3
Query: 202 ITGCTTKVFQDTNNGYSRVSSYSIS 128
I+ + K + NN Y ++ Y+I+
Sbjct: 315 ISSLSNKTIHNNNNNYKKLQYYNIN 339
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 7.5
Identities = 6/24 (25%), Positives = 14/24 (58%)
Frame = +1
Query: 115 KSRVQICYSWIHGYIRCWCPGIPW 186
++R+ + WI ++ C+ P + W
Sbjct: 181 RARLLVATVWILSFVICFPPLVGW 204
>U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein.
Length = 53
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 464 VPFPYLLQQGPKHFSPRPGHG 526
VP P + Q G + F PG G
Sbjct: 21 VPLPNVPQPGRRPFPTFPGQG 41
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 138 IAYLNSGFIHDSSIPPPPYTEEKLE 64
IA + + + +IP PYTE + E
Sbjct: 214 IAEIAFAYRYGDAIPTVPYTETETE 238
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.0 bits (42), Expect = 9.9
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = -1
Query: 489 CCNRYGNGTLQCW 451
C N Y +L CW
Sbjct: 110 CVNPYDRDSLSCW 122
>AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor
protein.
Length = 33
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 464 VPFPYLLQQGPKHFSPRPGHG 526
VP P + Q G + F PG G
Sbjct: 7 VPLPNVPQPGRRPFPTFPGQG 27
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 195 DAPPRYSRTPTTDIAVYPAIAYLN 124
D RY RTP+ ++ Y +YL+
Sbjct: 277 DGRLRYWRTPSVVVSDYSDYSYLD 300
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,684
Number of Sequences: 438
Number of extensions: 5255
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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