Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12f15
(226 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 0.46
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 0.46
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 0.46
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 0.46
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 0.46
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 0.46
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 0.46
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 0.46
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 0.46
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 0.46
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 0.46
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 0.46
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 0.46
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 0.46
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 0.46
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 0.80
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 0.80
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 1.1
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 2.5
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 2.5
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 20 4.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 4.3
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 19 5.7
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 19 5.7
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 19 7.5
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 19 7.5
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 19 7.5
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 19 9.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 19 9.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 19 9.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 19 9.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 19 9.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 19 9.9
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 19 9.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 19 9.9
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.0 bits (47), Expect = 0.46
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 0.80
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S + DD++
Sbjct: 94 SNTSKTVILSNKLESSDDIS 113
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 0.80
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKTV S + DD++
Sbjct: 94 SNTSKTVILSNKLESSDDIS 113
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 1.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SNTSKT+ S + DD++
Sbjct: 94 SNTSKTIILSNKLESSDDIS 113
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.6 bits (41), Expect = 2.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDDLT 84
SN SKTV S+ + DD++
Sbjct: 94 SNISKTVILSDKLESSDDIS 113
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 20.6 bits (41), Expect = 2.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 147 HVEHQQDRGHLGDGHDEGRSHLP 79
+ +HQQD G DG RS P
Sbjct: 93 YYQHQQDHGSGMDGMGGYRSASP 115
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKDD 90
SNTSKT S+ + DD
Sbjct: 99 SNTSKTFILSDKLESSDD 116
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 19.8 bits (39), Expect = 4.3
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 54 LLTSMSEIQVGEIVLHHDH 110
LL + +GEI HH++
Sbjct: 511 LLQEHDSVMLGEISPHHEY 529
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 19.4 bits (38), Expect = 5.7
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 64 ACPRSR*VRSSFIMTISEVSTVLL 135
ACP + S +M + +VST ++
Sbjct: 63 ACPDGLKLLSDGLMCVEKVSTTIV 86
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 19.4 bits (38), Expect = 5.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 54 LLTSMSEIQVGEIVLHHDHLRG 119
L+T S + V + LHH +RG
Sbjct: 285 LVTFASALAVVTLNLHHRGVRG 306
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 19.0 bits (37), Expect = 7.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -2
Query: 132 QDRGHLGDGHDEGRSHLPGSRTC 64
Q R +GD E R PG+ C
Sbjct: 15 QIRDRIGDNELEERIIYPGTLWC 37
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 19.0 bits (37), Expect = 7.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -2
Query: 132 QDRGHLGDGHDEGRSHLPGSRTC 64
Q R +GD E R PG+ C
Sbjct: 20 QIRDRIGDNELEERIIYPGTLWC 42
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 19.0 bits (37), Expect = 7.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -2
Query: 132 QDRGHLGDGHDEGRSHLPGSRTC 64
Q R +GD E R PG+ C
Sbjct: 20 QIRDRIGDNELEERIIYPGTLWC 42
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.6 bits (36), Expect = 9.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKD 93
SNTSKT SE + D
Sbjct: 91 SNTSKTFILSEKLESSD 107
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.6 bits (36), Expect = 9.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKD 93
SNTSKT SE + D
Sbjct: 91 SNTSKTFILSEKLESSD 107
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.6 bits (36), Expect = 9.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKD 93
SNTSKT SE + D
Sbjct: 91 SNTSKTFILSEKLESSD 107
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.6 bits (36), Expect = 9.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKD 93
SNTSKT SE + D
Sbjct: 91 SNTSKTFILSEKLESSD 107
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.6 bits (36), Expect = 9.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKD 93
SNTSKT SE + D
Sbjct: 91 SNTSKTFILSEKLESSD 107
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.6 bits (36), Expect = 9.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKD 93
SNTSKT SE + D
Sbjct: 91 SNTSKTFILSEKLESSD 107
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 18.6 bits (36), Expect = 9.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKD 93
SNTSKT SE + D
Sbjct: 91 SNTSKTFILSEKLESSD 107
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 18.6 bits (36), Expect = 9.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 143 SNTSKTVDTSEMVMMKD 93
SNTSKT SE + D
Sbjct: 91 SNTSKTFILSEKLESSD 107
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,855
Number of Sequences: 438
Number of extensions: 596
Number of successful extensions: 35
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3533460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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