Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt12f12
         (629 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X64461-1|CAA45791.1|  406|Drosophila melanogaster calreticulin p...    40   0.003
BT001670-1|AAN71425.1|  406|Drosophila melanogaster RE50082p pro...    40   0.003
AE014297-990|AAF54416.1|  406|Drosophila melanogaster CG9429-PA ...    40   0.003
AB000718-1|BAA85379.1|  406|Drosophila melanogaster calreticulin...    40   0.003
AE014298-592|AAF45914.1|  402|Drosophila melanogaster CG15376-PA...    32   0.56 
U19745-1|AAA61761.2|  614|Drosophila melanogaster V-ATPase A sub...    29   6.9  
AY089512-1|AAL90250.1|  614|Drosophila melanogaster GH21132p pro...    29   6.9  
AF185049-1|AAF00515.1|  614|Drosophila melanogaster vacuolar ATP...    29   6.9  
AE014134-2271|AAF53236.1|  614|Drosophila melanogaster CG12403-P...    29   6.9  

>X64461-1|CAA45791.1|  406|Drosophila melanogaster calreticulin
           protein.
          Length = 406

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 19/34 (55%), Positives = 22/34 (64%)
 Frame = -1

Query: 629 SGTIFDDFLITDDPAAAKERGEVIKKRQEGEKKM 528
           SGTIFD+ LITDD   A +    +K  Q GEKKM
Sbjct: 323 SGTIFDNVLITDDVELAAKAAAEVKNTQAGEKKM 356


>BT001670-1|AAN71425.1|  406|Drosophila melanogaster RE50082p
           protein.
          Length = 406

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 19/34 (55%), Positives = 22/34 (64%)
 Frame = -1

Query: 629 SGTIFDDFLITDDPAAAKERGEVIKKRQEGEKKM 528
           SGTIFD+ LITDD   A +    +K  Q GEKKM
Sbjct: 323 SGTIFDNVLITDDVELAAKAAAEVKNTQAGEKKM 356


>AE014297-990|AAF54416.1|  406|Drosophila melanogaster CG9429-PA
           protein.
          Length = 406

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 19/34 (55%), Positives = 22/34 (64%)
 Frame = -1

Query: 629 SGTIFDDFLITDDPAAAKERGEVIKKRQEGEKKM 528
           SGTIFD+ LITDD   A +    +K  Q GEKKM
Sbjct: 323 SGTIFDNVLITDDVELAAKAAAEVKNTQAGEKKM 356


>AB000718-1|BAA85379.1|  406|Drosophila melanogaster calreticulin
           protein.
          Length = 406

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 19/34 (55%), Positives = 22/34 (64%)
 Frame = -1

Query: 629 SGTIFDDFLITDDPAAAKERGEVIKKRQEGEKKM 528
           SGTIFD+ LITDD   A +    +K  Q GEKKM
Sbjct: 323 SGTIFDNVLITDDVELAAKAAAEVKNTQAGEKKM 356


>AE014298-592|AAF45914.1|  402|Drosophila melanogaster CG15376-PA
           protein.
          Length = 402

 Score = 32.3 bits (70), Expect = 0.56
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 89  VPAHGARPITKH*IITYINSERNPHLHGHQYETTDTYL 202
           VP H   P T H  ++Y +   +PH H H +E  D+Y+
Sbjct: 323 VPPHH-HPYTVHHPVSYAHPHGHPHAHPHPHEHFDSYI 359


>U19745-1|AAA61761.2|  614|Drosophila melanogaster V-ATPase A
           subunit protein.
          Length = 614

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 31  YKTLGLLHRMLLYSKTLHSRPSTRCQTDNKTLNNYIHQ 144
           YKT+G+L  ++ + +T      +  Q+DNK   N I +
Sbjct: 532 YKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRE 569


>AY089512-1|AAL90250.1|  614|Drosophila melanogaster GH21132p
           protein.
          Length = 614

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 31  YKTLGLLHRMLLYSKTLHSRPSTRCQTDNKTLNNYIHQ 144
           YKT+G+L  ++ + +T      +  Q+DNK   N I +
Sbjct: 532 YKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRE 569


>AF185049-1|AAF00515.1|  614|Drosophila melanogaster vacuolar ATPase
           subunit A protein.
          Length = 614

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 31  YKTLGLLHRMLLYSKTLHSRPSTRCQTDNKTLNNYIHQ 144
           YKT+G+L  ++ + +T      +  Q+DNK   N I +
Sbjct: 532 YKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRE 569


>AE014134-2271|AAF53236.1|  614|Drosophila melanogaster CG12403-PA
           protein.
          Length = 614

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 31  YKTLGLLHRMLLYSKTLHSRPSTRCQTDNKTLNNYIHQ 144
           YKT+G+L  ++ + +T      +  Q+DNK   N I +
Sbjct: 532 YKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRE 569


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,356,007
Number of Sequences: 53049
Number of extensions: 485505
Number of successful extensions: 1491
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)