Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12e24
(786 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119247-1|AAM51107.1| 444|Drosophila melanogaster SD20854p pro... 166 3e-41
AL109630-6|CAB51692.1| 444|Drosophila melanogaster EG:BACR7A4.2... 166 3e-41
AE014298-126|AAF45566.1| 444|Drosophila melanogaster CG3706-PA ... 166 3e-41
M17120-1|AAA28312.1| 201|Drosophila melanogaster protein ( D.me... 30 3.1
BT022154-1|AAY51549.1| 201|Drosophila melanogaster IP01413p pro... 30 3.1
AL023873-3|CAA19641.1| 201|Drosophila melanogaster EG:125H10.3,... 30 3.1
AE014298-2068|AAF48396.1| 621|Drosophila melanogaster CG9521-PA... 30 3.1
AE014298-27|AAF45498.1| 201|Drosophila melanogaster CG3796-PA p... 30 3.1
>AY119247-1|AAM51107.1| 444|Drosophila melanogaster SD20854p
protein.
Length = 444
Score = 166 bits (404), Expect = 3e-41
Identities = 86/259 (33%), Positives = 147/259 (56%), Gaps = 7/259 (2%)
Frame = -1
Query: 756 SEGGEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPEDYLTVELSLTW-SAQWPHFNYDS 580
+E ++ G V+ MR W+L Y+G +K + + V+L L + S+ HF+Y+
Sbjct: 147 AESNAFQGGGFHVYQEASMRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAEHFDYNR 206
Query: 579 HMAPYSMATDMARESWSQDYFKLLKKLH-----QTHYEQMGVITGIVKVDGKQYELNMPA 415
++ +A +ARE+W++ ++ LL+ ++ +THYEQ G + G V +DGK+ L M
Sbjct: 207 DLSSALIADSIAREAWNEKFYSLLRSVNHIVEKRTHYEQNGELAGQVTLDGKELALKMVG 266
Query: 414 VRDHSFGPFRDWRTFHRYVYHFIFLDNGDCMAIGSVSQPA-ILSHLTIGYYCRKSDQAVF 238
RDHSFG R + +RYVY +F+D+G M +GS+SQP+ LS L +GY C ++
Sbjct: 267 FRDHSFGTERCLSSINRYVYFALFMDDGSSMVVGSLSQPSFFLSSLKVGYVC-SPERQYQ 325
Query: 237 PVEWCDFQLYQHGEMQTLPKDYGFMFKAGGDIYTVKVQVDDEDVFYIGKERTSKFYERWS 58
P+ +F+LY +GE T P+ F+ + Y V++QV+ + Y+G + SK + ++
Sbjct: 326 PLTGSNFELYSYGEKGTPPQHQNFIVRTEEREYLVQIQVEASALRYVGGDWESKVFNQFV 385
Query: 57 TVDINGVKGRACVEWQYNN 1
+NGV G+ E+ Y +
Sbjct: 386 ACTVNGVPGQGHAEFLYRH 404
>AL109630-6|CAB51692.1| 444|Drosophila melanogaster EG:BACR7A4.20
protein.
Length = 444
Score = 166 bits (404), Expect = 3e-41
Identities = 86/259 (33%), Positives = 147/259 (56%), Gaps = 7/259 (2%)
Frame = -1
Query: 756 SEGGEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPEDYLTVELSLTW-SAQWPHFNYDS 580
+E ++ G V+ MR W+L Y+G +K + + V+L L + S+ HF+Y+
Sbjct: 147 AESNAFQGGGFHVYQEASMRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAEHFDYNR 206
Query: 579 HMAPYSMATDMARESWSQDYFKLLKKLH-----QTHYEQMGVITGIVKVDGKQYELNMPA 415
++ +A +ARE+W++ ++ LL+ ++ +THYEQ G + G V +DGK+ L M
Sbjct: 207 DLSSALIADSIAREAWNEKFYSLLRSVNHIVEKRTHYEQNGELAGQVTLDGKELALKMVG 266
Query: 414 VRDHSFGPFRDWRTFHRYVYHFIFLDNGDCMAIGSVSQPA-ILSHLTIGYYCRKSDQAVF 238
RDHSFG R + +RYVY +F+D+G M +GS+SQP+ LS L +GY C ++
Sbjct: 267 FRDHSFGTERCLSSINRYVYFALFMDDGSSMVVGSLSQPSFFLSSLKVGYVC-SPERQYQ 325
Query: 237 PVEWCDFQLYQHGEMQTLPKDYGFMFKAGGDIYTVKVQVDDEDVFYIGKERTSKFYERWS 58
P+ +F+LY +GE T P+ F+ + Y V++QV+ + Y+G + SK + ++
Sbjct: 326 PLTGSNFELYSYGEKGTPPQHQNFIVRTEEREYLVQIQVEASALRYVGGDWESKVFNQFV 385
Query: 57 TVDINGVKGRACVEWQYNN 1
+NGV G+ E+ Y +
Sbjct: 386 ACTVNGVPGQGHAEFLYRH 404
>AE014298-126|AAF45566.1| 444|Drosophila melanogaster CG3706-PA
protein.
Length = 444
Score = 166 bits (404), Expect = 3e-41
Identities = 86/259 (33%), Positives = 147/259 (56%), Gaps = 7/259 (2%)
Frame = -1
Query: 756 SEGGEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPEDYLTVELSLTW-SAQWPHFNYDS 580
+E ++ G V+ MR W+L Y+G +K + + V+L L + S+ HF+Y+
Sbjct: 147 AESNAFQGGGFHVYQEASMRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAEHFDYNR 206
Query: 579 HMAPYSMATDMARESWSQDYFKLLKKLH-----QTHYEQMGVITGIVKVDGKQYELNMPA 415
++ +A +ARE+W++ ++ LL+ ++ +THYEQ G + G V +DGK+ L M
Sbjct: 207 DLSSALIADSIAREAWNEKFYSLLRSVNHIVEKRTHYEQNGELAGQVTLDGKELALKMVG 266
Query: 414 VRDHSFGPFRDWRTFHRYVYHFIFLDNGDCMAIGSVSQPA-ILSHLTIGYYCRKSDQAVF 238
RDHSFG R + +RYVY +F+D+G M +GS+SQP+ LS L +GY C ++
Sbjct: 267 FRDHSFGTERCLSSINRYVYFALFMDDGSSMVVGSLSQPSFFLSSLKVGYVC-SPERQYQ 325
Query: 237 PVEWCDFQLYQHGEMQTLPKDYGFMFKAGGDIYTVKVQVDDEDVFYIGKERTSKFYERWS 58
P+ +F+LY +GE T P+ F+ + Y V++QV+ + Y+G + SK + ++
Sbjct: 326 PLTGSNFELYSYGEKGTPPQHQNFIVRTEEREYLVQIQVEASALRYVGGDWESKVFNQFV 385
Query: 57 TVDINGVKGRACVEWQYNN 1
+NGV G+ E+ Y +
Sbjct: 386 ACTVNGVPGQGHAEFLYRH 404
>M17120-1|AAA28312.1| 201|Drosophila melanogaster protein (
D.melanogaster achaetegene encoding nerve
differentiation, complete cds. ).
Length = 201
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 362 YRWNVRQSRNGPKL*SLTAGIFSSYCLPSTFTIPVITP 475
Y W+ P + + SSYC P+T TIP TP
Sbjct: 124 YAWHQELQLQSPTGSTSSCNSISSYCKPATSTIPGATP 161
>BT022154-1|AAY51549.1| 201|Drosophila melanogaster IP01413p
protein.
Length = 201
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 362 YRWNVRQSRNGPKL*SLTAGIFSSYCLPSTFTIPVITP 475
Y W+ P + + SSYC P+T TIP TP
Sbjct: 124 YAWHQELQLQSPTGSTSSCNSISSYCKPATSTIPGATP 161
>AL023873-3|CAA19641.1| 201|Drosophila melanogaster
EG:125H10.3,FBgn0000022;ac protein.
Length = 201
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 362 YRWNVRQSRNGPKL*SLTAGIFSSYCLPSTFTIPVITP 475
Y W+ P + + SSYC P+T TIP TP
Sbjct: 124 YAWHQELQLQSPTGSTSSCNSISSYCKPATSTIPGATP 161
>AE014298-2068|AAF48396.1| 621|Drosophila melanogaster CG9521-PA
protein.
Length = 621
Score = 30.3 bits (65), Expect = 3.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 462 GIVKVDGKQYELNMPAVRDHSFGPFRDWRTFHRYVYHFIF 343
G+ K++ + +E +P + H P++ W + YV HF F
Sbjct: 513 GMEKINARLWEKKIPTCKQH---PYKSWAYWACYVRHFTF 549
>AE014298-27|AAF45498.1| 201|Drosophila melanogaster CG3796-PA
protein.
Length = 201
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 362 YRWNVRQSRNGPKL*SLTAGIFSSYCLPSTFTIPVITP 475
Y W+ P + + SSYC P+T TIP TP
Sbjct: 124 YAWHQELQLQSPTGSTSSCNSISSYCKPATSTIPGATP 161
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,939,685
Number of Sequences: 53049
Number of extensions: 730243
Number of successful extensions: 1672
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1666
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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