Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt12e20
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p pro...    79   5e-15
AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl pyr...    79   5e-15
AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p pro...    79   5e-15
AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-P...    79   5e-15
AE014297-3567|AAF56312.2| 1402|Drosophila melanogaster CG5789-PA...    29   5.2  
L42514-1|AAA98918.1| 1039|Drosophila melanogaster male-specific ...    28   9.1  
BT023828-1|AAZ86749.1| 1039|Drosophila melanogaster RE18093p pro...    28   9.1  
AE014134-2958|AAF53689.1| 1039|Drosophila melanogaster CG10385-P...    28   9.1  

>AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p
           protein.
          Length = 419

 Score = 79.0 bits (186), Expect = 5e-15
 Identities = 30/62 (48%), Positives = 49/62 (79%)
 Frame = -1

Query: 631 YGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHELFFKILDNIF 452
           YG  +P  + R+K+LY+EL LP TY++FEE +Y++++T IQQ +RG+PH+ F +IL+ I+
Sbjct: 356 YGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSRGVPHQTFLQILNKIY 415

Query: 451 RR 446
           +R
Sbjct: 416 QR 417


>AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl
           pyrophosphate synthase protein.
          Length = 380

 Score = 79.0 bits (186), Expect = 5e-15
 Identities = 30/62 (48%), Positives = 49/62 (79%)
 Frame = -1

Query: 631 YGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHELFFKILDNIF 452
           YG  +P  + R+K+LY+EL LP TY++FEE +Y++++T IQQ +RG+PH+ F +IL+ I+
Sbjct: 317 YGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSRGVPHQTFLQILNKIY 376

Query: 451 RR 446
           +R
Sbjct: 377 QR 378


>AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p
           protein.
          Length = 419

 Score = 79.0 bits (186), Expect = 5e-15
 Identities = 30/62 (48%), Positives = 49/62 (79%)
 Frame = -1

Query: 631 YGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHELFFKILDNIF 452
           YG  +P  + R+K+LY+EL LP TY++FEE +Y++++T IQQ +RG+PH+ F +IL+ I+
Sbjct: 356 YGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSRGVPHQTFLQILNKIY 415

Query: 451 RR 446
           +R
Sbjct: 416 QR 417


>AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-PA
           protein.
          Length = 419

 Score = 79.0 bits (186), Expect = 5e-15
 Identities = 30/62 (48%), Positives = 49/62 (79%)
 Frame = -1

Query: 631 YGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHELFFKILDNIF 452
           YG  +P  + R+K+LY+EL LP TY++FEE +Y++++T IQQ +RG+PH+ F +IL+ I+
Sbjct: 356 YGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSRGVPHQTFLQILNKIY 415

Query: 451 RR 446
           +R
Sbjct: 416 QR 417


>AE014297-3567|AAF56312.2| 1402|Drosophila melanogaster CG5789-PA
            protein.
          Length = 1402

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 65   TKTIIQRTVKLLF*QITVLTTINRYNQV 148
            T  +IQRT+++ F Q TVLT  +R + V
Sbjct: 1303 TDALIQRTIRIKFKQCTVLTVAHRLHTV 1330


>L42514-1|AAA98918.1| 1039|Drosophila melanogaster male-specific
            lethal-1 protein protein.
          Length = 1039

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 582  KNFSYPIRTRSSKKLPTISLERRSNKSQGDYL 487
            K  + P+ T +SKK+PT + E R  ++   Y+
Sbjct: 997  KALAEPVATLASKKIPTTAAEARHQENHSSYV 1028


>BT023828-1|AAZ86749.1| 1039|Drosophila melanogaster RE18093p protein.
          Length = 1039

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 582  KNFSYPIRTRSSKKLPTISLERRSNKSQGDYL 487
            K  + P+ T +SKK+PT + E R  ++   Y+
Sbjct: 997  KALAEPVATLASKKIPTTAAEARHQENHSSYV 1028


>AE014134-2958|AAF53689.1| 1039|Drosophila melanogaster CG10385-PA
            protein.
          Length = 1039

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 582  KNFSYPIRTRSSKKLPTISLERRSNKSQGDYL 487
            K  + P+ T +SKK+PT + E R  ++   Y+
Sbjct: 997  KALAEPVATLASKKIPTTAAEARHQENHSSYV 1028


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,484,213
Number of Sequences: 53049
Number of extensions: 379652
Number of successful extensions: 551
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)