Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt12e18
         (880 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           31   0.046
AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein...    29   0.14 
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       29   0.25 
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           28   0.33 
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           26   1.3  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           26   1.3  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   3.0  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           25   3.0  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           25   3.0  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           25   3.0  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           25   3.0  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   5.3  

>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 31.1 bits (67), Expect = 0.046
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = +2

Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAA 565
           +TS  + P   ++   TTT    T  + PT T+++   T+  +AP +   T+ TT A   
Sbjct: 17  VTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQ---TTTTTVASGP 73

Query: 566 TIVLEPTDTSS 598
                 TDT++
Sbjct: 74  VTTTGSTDTTT 84



 Score = 28.3 bits (60), Expect = 0.33
 Identities = 20/74 (27%), Positives = 32/74 (43%)
 Frame = +2

Query: 398 SVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVL 577
           +  +AP   ++   TTT  A T         +  T+VA  PV  + ++ TTT  +A    
Sbjct: 33  TTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSSA---- 88

Query: 578 EPTDTSSLITSVAL 619
            P D  + +  V L
Sbjct: 89  -PQDVKAALVPVLL 101



 Score = 27.1 bits (57), Expect = 0.75
 Identities = 26/76 (34%), Positives = 34/76 (44%)
 Frame = +2

Query: 401 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLE 580
           V LA     I   TTT   AT  + PT T+       +AP     T+ TT A   T  + 
Sbjct: 13  VLLAVTSGQIDPPTTTVAPATTTVAPTTTT-------VAP-----TTTTTVAPTTTTTVA 60

Query: 581 PTDTSSLITSVALAPV 628
           P  T++  T+VA  PV
Sbjct: 61  PGQTTT--TTVASGPV 74


>AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein
           protein.
          Length = 178

 Score = 29.5 bits (63), Expect = 0.14
 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
 Frame = +2

Query: 389 LITSVALAPVEDSIGSFTTTAGAATIVLEPTD---TSSLITSVALAPVEDSITSFTTTAG 559
           L   +A   ++   G    T  AAT     T    TS   T+ A +  + S +  TTT  
Sbjct: 47  LRAQIAQQRIQQRYGVTVATTSAATTTAATTSAATTSEATTTAAASTTQASDSDNTTTTA 106

Query: 560 AATIVLEPTDTSS 598
            AT   E   TSS
Sbjct: 107 EATTTTEAQTTSS 119



 Score = 25.4 bits (53), Expect = 2.3
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = +2

Query: 383 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGA 562
           S   T+ A +  + S    TTT   AT   E   TSS   S        +  +  TTA +
Sbjct: 83  SEATTTAAASTTQASDSDNTTTTAEATTTTEAQTTSSSDNSTTTEAAATTTAASETTADS 142

Query: 563 AT 568
           ++
Sbjct: 143 SS 144


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 28.7 bits (61), Expect = 0.25
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
 Frame = -2

Query: 645 DVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVINDEVS--VGS 472
           DV+E +      ++  ++ +         P VV  ++IE S G     ++ ++ S    S
Sbjct: 67  DVLEQNYAVEVRDIERNDYNFDEPKTSLDPVVVEEEIIEESNGPDGDNLVLEQGSNNSNS 126

Query: 471 KTIV------AAPAVVVNDPIESSTGASAT-EVINDE 382
           K IV         A+ V D + + TG S   + I+DE
Sbjct: 127 KDIVDFEVLKIKSALPVEDELRTDTGISTKYDEIDDE 163


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 28.3 bits (60), Expect = 0.33
 Identities = 14/59 (23%), Positives = 24/59 (40%)
 Frame = +2

Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAAT 568
           +TS  + P   ++   TTT    T  + PT T+++  +          T+ T   G  T
Sbjct: 17  VTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQTT 75



 Score = 25.4 bits (53), Expect = 2.3
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +2

Query: 497 ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSL--ITSVALAP 625
           +TS  + P   ++   TTT    T  + PT T+++   T+  +AP
Sbjct: 17  VTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAP 61


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +2

Query: 440 TTTAGAATIVLEPTDTSS-LITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS 610
           TTT   AT  L PT T++  IT+        +    TTT  A T   + TD +   T+
Sbjct: 98  TTTLRPATTTLRPTTTTTDWITTTTTEATTTTRFPTTTTTSAPTTPSQWTDPTITTTT 155


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +2

Query: 440 TTTAGAATIVLEPTDTSS-LITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS 610
           TTT   AT  L PT T++  IT+        +    TTT  A T   + TD +   T+
Sbjct: 98  TTTLRPATTTLRPTTTTTDWITTTTTEATTTTRFPTTTTTSAPTTPSQWTDPTITTTT 155


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +2

Query: 440 TTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS 610
           TTT    T  L PT T++   IT+        +    TTT  A T   + TD +   T+
Sbjct: 98  TTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTT 156


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +2

Query: 440 TTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS 610
           TTT    T  L PT T++   IT+        +    TTT  A T   + TD +   T+
Sbjct: 98  TTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTT 156


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +2

Query: 440 TTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS 610
           TTT    T  L PT T++   IT+        +    TTT  A T   + TD +   T+
Sbjct: 98  TTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTT 156


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +2

Query: 440 TTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS 610
           TTT    T  L PT T++   IT+        +    TTT  A T   + TD +   T+
Sbjct: 98  TTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTT 156


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +2

Query: 440 TTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS 610
           TTT    T  L PT T++   IT+        +    TTT  A T   + TD +   T+
Sbjct: 98  TTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTT 156


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +2

Query: 440 TTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS 610
           TTT    T  L PT T++   IT+        +    TTT  A T   + TD +   T+
Sbjct: 98  TTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTKFPTTTTTSAPTTPSQWTDPTITTTT 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,102
Number of Sequences: 2352
Number of extensions: 12254
Number of successful extensions: 33
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)