Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12e16
(711 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U72511-1|AAC51639.1| 211|Homo sapiens B-cell receptor associate... 141 2e-33
U47924-19|AAB51324.1| 299|Homo sapiens B-cell receptor associat... 141 2e-33
BC110322-1|AAI10323.1| 299|Homo sapiens prohibitin 2 protein. 141 2e-33
BC014766-1|AAH14766.1| 299|Homo sapiens prohibitin 2 protein. 141 2e-33
AF178980-1|AAF44345.1| 299|Homo sapiens D-prohibitin protein. 141 2e-33
AF150962-1|AAD38042.1| 299|Homo sapiens repressor of estrogen r... 141 2e-33
AF126021-1|AAF17231.1| 299|Homo sapiens B-cell receptor-associa... 141 2e-33
AK223181-1|BAD96901.1| 272|Homo sapiens prohibitin variant prot... 76 1e-13
S85655-1|AAB21614.1| 272|Homo sapiens prohibitin protein. 75 3e-13
L14272-1|AAO18340.1| 272|Homo sapiens prohibitin protein. 75 3e-13
BT007411-1|AAP36079.1| 272|Homo sapiens prohibitin protein. 75 3e-13
BC095460-1|AAH95460.1| 272|Homo sapiens prohibitin protein. 75 3e-13
BC013401-1|AAH13401.1| 272|Homo sapiens prohibitin protein. 75 3e-13
AY577780-1|AAS88903.1| 272|Homo sapiens prohibitin protein. 75 3e-13
CR541706-1|CAG46507.1| 272|Homo sapiens PHB protein. 73 1e-12
AF279895-1|AAK07552.1| 69|Homo sapiens PNAS-141 protein. 69 2e-11
BC014228-1|AAH14228.1| 201|Homo sapiens LOC494150 protein protein. 54 4e-07
BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongatio... 31 3.1
AY540752-1|AAT44402.1| 154|Homo sapiens rhabdomyosarcoma antige... 31 3.1
AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongatio... 31 3.1
AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongatio... 31 3.1
AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongatio... 31 3.1
>U72511-1|AAC51639.1| 211|Homo sapiens B-cell receptor associated
protein protein.
Length = 211
Score = 141 bits (342), Expect = 2e-33
Identities = 77/148 (52%), Positives = 96/148 (64%)
Frame = -2
Query: 632 SQLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXX 453
SQLITQR QVSLLIRREL ERA DF++ILDDV++TELSF +EYT
Sbjct: 63 SQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRA 122
Query: 452 XXXXERAKQERQQKIVQXXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+AKQE++QKIVQ NPGY+KLRKIRAAQ+IS+ IA SQNR
Sbjct: 123 QFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 182
Query: 272 VFLPGNSLMINLQDPTFDDLSEKLTKKK 189
++L ++L++NLQD +F S+ L K K
Sbjct: 183 IYLTADNLVLNLQDESFTRGSDSLIKGK 210
>U47924-19|AAB51324.1| 299|Homo sapiens B-cell receptor associated
protein protein.
Length = 299
Score = 141 bits (342), Expect = 2e-33
Identities = 77/148 (52%), Positives = 96/148 (64%)
Frame = -2
Query: 632 SQLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXX 453
SQLITQR QVSLLIRREL ERA DF++ILDDV++TELSF +EYT
Sbjct: 151 SQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRA 210
Query: 452 XXXXERAKQERQQKIVQXXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+AKQE++QKIVQ NPGY+KLRKIRAAQ+IS+ IA SQNR
Sbjct: 211 QFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
Query: 272 VFLPGNSLMINLQDPTFDDLSEKLTKKK 189
++L ++L++NLQD +F S+ L K K
Sbjct: 271 IYLTADNLVLNLQDESFTRGSDSLIKGK 298
>BC110322-1|AAI10323.1| 299|Homo sapiens prohibitin 2 protein.
Length = 299
Score = 141 bits (342), Expect = 2e-33
Identities = 77/148 (52%), Positives = 96/148 (64%)
Frame = -2
Query: 632 SQLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXX 453
SQLITQR QVSLLIRREL ERA DF++ILDDV++TELSF +EYT
Sbjct: 151 SQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRA 210
Query: 452 XXXXERAKQERQQKIVQXXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+AKQE++QKIVQ NPGY+KLRKIRAAQ+IS+ IA SQNR
Sbjct: 211 QFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
Query: 272 VFLPGNSLMINLQDPTFDDLSEKLTKKK 189
++L ++L++NLQD +F S+ L K K
Sbjct: 271 IYLTADNLVLNLQDESFTRGSDSLIKGK 298
>BC014766-1|AAH14766.1| 299|Homo sapiens prohibitin 2 protein.
Length = 299
Score = 141 bits (342), Expect = 2e-33
Identities = 77/148 (52%), Positives = 96/148 (64%)
Frame = -2
Query: 632 SQLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXX 453
SQLITQR QVSLLIRREL ERA DF++ILDDV++TELSF +EYT
Sbjct: 151 SQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRA 210
Query: 452 XXXXERAKQERQQKIVQXXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+AKQE++QKIVQ NPGY+KLRKIRAAQ+IS+ IA SQNR
Sbjct: 211 QFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
Query: 272 VFLPGNSLMINLQDPTFDDLSEKLTKKK 189
++L ++L++NLQD +F S+ L K K
Sbjct: 271 IYLTADNLVLNLQDESFTRGSDSLIKGK 298
>AF178980-1|AAF44345.1| 299|Homo sapiens D-prohibitin protein.
Length = 299
Score = 141 bits (342), Expect = 2e-33
Identities = 77/148 (52%), Positives = 96/148 (64%)
Frame = -2
Query: 632 SQLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXX 453
SQLITQR QVSLLIRREL ERA DF++ILDDV++TELSF +EYT
Sbjct: 151 SQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRA 210
Query: 452 XXXXERAKQERQQKIVQXXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+AKQE++QKIVQ NPGY+KLRKIRAAQ+IS+ IA SQNR
Sbjct: 211 QFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
Query: 272 VFLPGNSLMINLQDPTFDDLSEKLTKKK 189
++L ++L++NLQD +F S+ L K K
Sbjct: 271 IYLTADNLVLNLQDESFTRGSDSLIKGK 298
>AF150962-1|AAD38042.1| 299|Homo sapiens repressor of estrogen
receptor activity protein.
Length = 299
Score = 141 bits (342), Expect = 2e-33
Identities = 77/148 (52%), Positives = 96/148 (64%)
Frame = -2
Query: 632 SQLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXX 453
SQLITQR QVSLLIRREL ERA DF++ILDDV++TELSF +EYT
Sbjct: 151 SQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRA 210
Query: 452 XXXXERAKQERQQKIVQXXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+AKQE++QKIVQ NPGY+KLRKIRAAQ+IS+ IA SQNR
Sbjct: 211 QFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
Query: 272 VFLPGNSLMINLQDPTFDDLSEKLTKKK 189
++L ++L++NLQD +F S+ L K K
Sbjct: 271 IYLTADNLVLNLQDESFTRGSDSLIKGK 298
>AF126021-1|AAF17231.1| 299|Homo sapiens B-cell receptor-associated
protein BAP37 protein.
Length = 299
Score = 141 bits (342), Expect = 2e-33
Identities = 77/148 (52%), Positives = 96/148 (64%)
Frame = -2
Query: 632 SQLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXX 453
SQLITQR QVSLLIRREL ERA DF++ILDDV++TELSF +EYT
Sbjct: 151 SQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRA 210
Query: 452 XXXXERAKQERQQKIVQXXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+AKQE++QKIVQ NPGY+KLRKIRAAQ+IS+ IA SQNR
Sbjct: 211 QFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
Query: 272 VFLPGNSLMINLQDPTFDDLSEKLTKKK 189
++L ++L++NLQD +F S+ L K K
Sbjct: 271 IYLTADNLVLNLQDESFTRGSDSLIKGK 298
>AK223181-1|BAD96901.1| 272|Homo sapiens prohibitin variant
protein.
Length = 272
Score = 76.2 bits (179), Expect = 1e-13
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Frame = -2
Query: 629 QLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXX 450
+LITQR+ VS + +L ERAA F +ILDDVSLT L+FGKE+T
Sbjct: 138 ELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERAR 197
Query: 449 XXXERAKQERQQKIVQ-XXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+A+Q+++ I+ G +KLRK+ AA+ I+ +++S+N
Sbjct: 198 FVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIKLRKLEAAEDIAYQLSRSRNI 257
Query: 272 VFLP-GNSLMINL 237
+LP G S+++ L
Sbjct: 258 TYLPAGQSVLLQL 270
>S85655-1|AAB21614.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 74.5 bits (175), Expect = 3e-13
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Frame = -2
Query: 629 QLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXX 450
+LITQR+ VS + +L ERAA F +ILDDVSLT L+FGKE+T
Sbjct: 138 ELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERAR 197
Query: 449 XXXERAKQERQQKIVQ-XXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+A+Q+++ I+ G ++LRK+ AA+ I+ +++S+N
Sbjct: 198 FVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNI 257
Query: 272 VFLP-GNSLMINL 237
+LP G S+++ L
Sbjct: 258 TYLPAGQSVLLQL 270
>L14272-1|AAO18340.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 74.5 bits (175), Expect = 3e-13
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Frame = -2
Query: 629 QLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXX 450
+LITQR+ VS + +L ERAA F +ILDDVSLT L+FGKE+T
Sbjct: 138 ELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERAR 197
Query: 449 XXXERAKQERQQKIVQ-XXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+A+Q+++ I+ G ++LRK+ AA+ I+ +++S+N
Sbjct: 198 FVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNI 257
Query: 272 VFLP-GNSLMINL 237
+LP G S+++ L
Sbjct: 258 TYLPAGQSVLLQL 270
>BT007411-1|AAP36079.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 74.5 bits (175), Expect = 3e-13
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Frame = -2
Query: 629 QLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXX 450
+LITQR+ VS + +L ERAA F +ILDDVSLT L+FGKE+T
Sbjct: 138 ELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERAR 197
Query: 449 XXXERAKQERQQKIVQ-XXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+A+Q+++ I+ G ++LRK+ AA+ I+ +++S+N
Sbjct: 198 FVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNI 257
Query: 272 VFLP-GNSLMINL 237
+LP G S+++ L
Sbjct: 258 TYLPAGQSVLLQL 270
>BC095460-1|AAH95460.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 74.5 bits (175), Expect = 3e-13
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Frame = -2
Query: 629 QLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXX 450
+LITQR+ VS + +L ERAA F +ILDDVSLT L+FGKE+T
Sbjct: 138 ELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERAR 197
Query: 449 XXXERAKQERQQKIVQ-XXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+A+Q+++ I+ G ++LRK+ AA+ I+ +++S+N
Sbjct: 198 FVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNI 257
Query: 272 VFLP-GNSLMINL 237
+LP G S+++ L
Sbjct: 258 TYLPAGQSVLLQL 270
>BC013401-1|AAH13401.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 74.5 bits (175), Expect = 3e-13
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Frame = -2
Query: 629 QLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXX 450
+LITQR+ VS + +L ERAA F +ILDDVSLT L+FGKE+T
Sbjct: 138 ELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERAR 197
Query: 449 XXXERAKQERQQKIVQ-XXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+A+Q+++ I+ G ++LRK+ AA+ I+ +++S+N
Sbjct: 198 FVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNI 257
Query: 272 VFLP-GNSLMINL 237
+LP G S+++ L
Sbjct: 258 TYLPAGQSVLLQL 270
>AY577780-1|AAS88903.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 74.5 bits (175), Expect = 3e-13
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Frame = -2
Query: 629 QLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXX 450
+LITQR+ VS + +L ERAA F +ILDDVSLT L+FGKE+T
Sbjct: 138 ELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERAR 197
Query: 449 XXXERAKQERQQKIVQ-XXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+A+Q+++ I+ G ++LRK+ AA+ I+ +++S+N
Sbjct: 198 FVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNI 257
Query: 272 VFLP-GNSLMINL 237
+LP G S+++ L
Sbjct: 258 TYLPAGQSVLLQL 270
>CR541706-1|CAG46507.1| 272|Homo sapiens PHB protein.
Length = 272
Score = 72.9 bits (171), Expect = 1e-12
Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Frame = -2
Query: 629 QLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXX 450
+LITQR+ VS + +L ER A F +ILDDVSLT L+FGKE+T
Sbjct: 138 ELITQRELVSRQVSDDLTERVATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERAR 197
Query: 449 XXXERAKQERQQKIVQ-XXXXXXXXXXXXXXXXMNPGYLKLRKIRAAQSISRMIAQSQNR 273
E+A+Q+++ I+ G ++LRK+ AA+ I+ +++S+N
Sbjct: 198 FVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNI 257
Query: 272 VFLP-GNSLMINL 237
+LP G S+++ L
Sbjct: 258 TYLPAGQSVLLQL 270
>AF279895-1|AAK07552.1| 69|Homo sapiens PNAS-141 protein.
Length = 69
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/54 (59%), Positives = 43/54 (79%)
Frame = -2
Query: 350 NPGYLKLRKIRAAQSISRMIAQSQNRVFLPGNSLMINLQDPTFDDLSEKLTKKK 189
NPGY+KLRKIRAAQ+IS+ IA SQNR++L ++L++NLQD +F S+ L K K
Sbjct: 15 NPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQDESFTRGSDSLIKGK 68
>BC014228-1|AAH14228.1| 201|Homo sapiens LOC494150 protein protein.
Length = 201
Score = 54.4 bits (125), Expect = 4e-07
Identities = 25/43 (58%), Positives = 34/43 (79%)
Frame = -2
Query: 629 QLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYT 501
++ITQR+ VS + +L E+AA F +ILDDVSLT L+FGKE+T
Sbjct: 78 EVITQRELVSRQVSNDLTEQAATFGLILDDVSLTYLTFGKEFT 120
>BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -3
Query: 487 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 356
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 30 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
>AY540752-1|AAT44402.1| 154|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.22 protein.
Length = 154
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -3
Query: 487 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 356
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 30 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
>AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -3
Query: 487 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 356
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 30 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
>AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -3
Query: 487 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 356
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 30 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
>AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongation
factor TFIIS.h protein.
Length = 320
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -3
Query: 487 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 356
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 2 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,746,933
Number of Sequences: 237096
Number of extensions: 1237069
Number of successful extensions: 2181
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2159
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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