Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12e11
(657 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0819 - 28312667-28313219,28315157-28316430 71 6e-13
07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907 68 6e-12
02_05_0264 + 27263562-27264830 67 1e-11
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 64 9e-11
04_04_0126 + 22952577-22952871,22952912-22953519,22954125-229545... 53 2e-07
05_03_0089 - 8327044-8327142,8327238-8327306,8327413-8327504,832... 51 7e-07
01_05_0509 + 22811184-22812038,22813493-22814020 50 1e-06
01_05_0584 + 23435620-23436408,23436966-23437508 49 4e-06
06_01_0872 + 6687849-6687864,6689622-6690235,6690927-6691478 48 7e-06
01_05_0735 - 24749975-24750601,24751411-24751541,24752150-247523... 48 9e-06
05_07_0288 + 29001228-29001399,29001493-29001723,29001817-290019... 46 3e-05
08_01_0185 + 1558580-1558755,1558848-1559737,1559828-1559919,156... 44 8e-05
01_05_0586 + 23443371-23444645 44 8e-05
02_05_1018 - 33530834-33530926,33531036-33531098,33531193-335312... 42 4e-04
05_04_0029 - 17321378-17321905,17323348-17323525,17323531-173239... 42 6e-04
01_05_0504 + 22781737-22781799,22782033-22782287,22783652-22784077 42 6e-04
10_08_0001 + 13984436-13984514,13984804-13984926,13985181-139854... 39 0.003
04_01_0524 - 6877156-6877175,6877254-6877281,6877394-6877529,687... 37 0.016
12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551 34 0.087
12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660 34 0.087
04_04_0125 + 22944505-22944556,22944665-22945363,22946445-22946947 34 0.11
01_05_0507 - 22800124-22800163,22800411-22800554,22801291-228018... 33 0.26
12_01_0599 - 4892146-4893552 31 0.61
11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360 31 0.61
02_05_0565 + 30010395-30010485,30011604-30011678,30011913-300121... 30 1.4
05_02_0164 - 7240739-7243051,7243902-7244036,7244322-7245371 29 3.3
01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708 29 3.3
05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405... 28 5.7
01_06_0330 + 28517378-28518266,28518438-28518550 28 5.7
12_01_0002 - 4477-6144,6571-7440 28 7.5
11_01_0003 - 6099-7766,8193-9062 28 7.5
06_03_0048 + 15959234-15959590,15959973-15960314 28 7.5
05_05_0039 - 21782093-21782320,21782383-21782754,21783031-217834... 28 7.5
04_03_0313 + 14233049-14234362,14234558-14235523 28 7.5
10_01_0049 - 668482-669283,669596-670131,670235-670452,670554-67... 27 9.9
09_04_0112 - 14757947-14758972 27 9.9
06_01_0581 - 4153668-4153883,4154070-4155104,4155718-4156292,415... 27 9.9
01_06_1194 - 35313132-35313154,35314462-35314604,35314751-353154... 27 9.9
>04_04_0819 - 28312667-28313219,28315157-28316430
Length = 608
Score = 71.3 bits (167), Expect = 6e-13
Identities = 50/195 (25%), Positives = 93/195 (47%)
Frame = -2
Query: 596 LSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVL 417
L ++A EGIG+V+P+E + F G L ++M+ I +MY + G GY +G
Sbjct: 230 LGVAVYAFEGIGMVLPLEAEAADKRKFGG---TLALSMAFIAVMYGLFGAMGYLAFGAAT 286
Query: 416 RGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYRNFAQIL 237
R IT NL W +V + + +++FFT P+ V ++ R +K Y + + L
Sbjct: 287 RDIITTNLG-TGWLSVTVQLGLCINLFFTMPVMMNPVYEVAERLL---CRKRYAWWLRWL 342
Query: 236 ARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVIETVFRWEDLGRWNWIFWK 57
V + G + + +P +++VG+ +LG ++P ++G W +
Sbjct: 343 ----LVMVVGLMAMLVPNFADFLSLVGSSVCVLLGFVLPAAFHLKVFGAEVG-WPGLA-G 396
Query: 56 NLLIVLFGVCSLVSG 12
++ +++ G VSG
Sbjct: 397 DVAVIVVGTALAVSG 411
>07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907
Length = 424
Score = 68.1 bits (159), Expect = 6e-12
Identities = 46/210 (21%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Frame = -2
Query: 635 KESXGDLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSI 456
+ + L +P +F EG + + +E++M + + F S VV I+++Y+
Sbjct: 207 RSAFNGLWAIPFTFGVAVFCFEGFSMTLALESSMAERRKFRWVLSQAVVG---IIIVYAC 263
Query: 455 LGLFGYFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAE- 279
G+ GY YG+ + ITLNLP + W + K + +++ FT+P+ + +I +
Sbjct: 264 FGVCGYLAYGEATKDIITLNLP-NSWSSAAVKVGLCIALVFTFPVMMHPIHEIVEERFQS 322
Query: 278 ----PHIKKEYRNFAQI---LARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIP 120
P + + R + +R V I + +P I+ VG+ ++L ++P
Sbjct: 323 SGCFPKLSHKVRGAEWVGLHSSRIVMVTILSVVASFIPAFGSFISFVGSTVCALLSFVLP 382
Query: 119 GVIETVFRWEDLGRWNWIFWKNLLIVLFGV 30
+ + W W + +LFG+
Sbjct: 383 TIFHLSIVGSSMSPWR--RWGDYGFLLFGL 410
>02_05_0264 + 27263562-27264830
Length = 422
Score = 67.3 bits (157), Expect = 1e-11
Identities = 53/204 (25%), Positives = 94/204 (46%)
Frame = -2
Query: 623 GDLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLF 444
G LS + + ++A EGIG+V+P+E + F + L ++M I +MY + G
Sbjct: 218 GGLSAILYGIGVSVYAFEGIGMVLPLEAEAANKKKF---GTTLGLSMGFIAVMYGLFGAM 274
Query: 443 GYFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKK 264
GY +GD R IT NL W + + + +++FFT P+ V ++ R H K+
Sbjct: 275 GYIAFGDATRDIITTNLG-TGWLSAAVQLGLCINLFFTMPVMMHPVYEVAERLL--HGKR 331
Query: 263 EYRNFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVIETVFRWEDL 84
+ L R V G + +P + +VG+ +LG ++P ++
Sbjct: 332 ----YCWWL-RWLLVLAVGLSAMYVPNFTDFLALVGSSVCVLLGFVLPASFHLKVFGAEM 386
Query: 83 GRWNWIFWKNLLIVLFGVCSLVSG 12
W+ + ++L+VL G+ V G
Sbjct: 387 S-WSGVL-SDVLLVLLGLSLAVFG 408
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 64.1 bits (149), Expect = 9e-11
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Frame = -2
Query: 608 LPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRY 429
+P +F EG + + +E +M + F VL+ A++ + +Y G+ GY Y
Sbjct: 217 VPFACGVAVFCFEGFCLTLALEASMSDRRRFR---PVLLHAIAGVTAVYVCFGVCGYLAY 273
Query: 428 GDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYRNF 249
GDV R +TLNLP ++W K + +++ T+P+ + +I P R
Sbjct: 274 GDVTRDIVTLNLP-NNWSTAAVKIVLCVALALTFPVMMHPIHEIVEARLFPSAGGWARKR 332
Query: 248 AQILA-RTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGV 114
A + A R + V + +P + VG+ ++L ++P +
Sbjct: 333 AAVQASRVAVVGAVTAVACFVPAFGEFAAFVGSTVCALLSFVLPAL 378
>04_04_0126 +
22952577-22952871,22952912-22953519,22954125-22954596,
22954882-22954955,22955559-22955937,22956659-22956711
Length = 626
Score = 53.2 bits (122), Expect = 2e-07
Identities = 39/167 (23%), Positives = 74/167 (44%)
Frame = -2
Query: 620 DLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFG 441
++S LP L F G + + N+M++ F VLV+ + Y + + G
Sbjct: 265 NVSGLPTALGLYTFCYCGHAIFPTLCNSMQEKDKF---SRVLVICFVACTVNYGSMAILG 321
Query: 440 YFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKE 261
Y YGD ++ +TLNLP + +K I ++ + + +V + T E +
Sbjct: 322 YLMYGDDVKSQVTLNLPEG---KISSKLAIYTTLINPFSKYALMVTPVATAIEEKLLAGN 378
Query: 260 YRNFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIP 120
R+ +L RT V I + +P ++ +VG+L + +++P
Sbjct: 379 KRS-VNVLIRTLIVVSTVVIALTVPFFGHLMALVGSLLSVMASMLLP 424
>05_03_0089 -
8327044-8327142,8327238-8327306,8327413-8327504,
8327932-8329042
Length = 456
Score = 51.2 bits (117), Expect = 7e-07
Identities = 42/200 (21%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
Frame = -2
Query: 596 LSTVIFAMEGIGVVMPVENTMKK-PQHFLGCPSV--LVVAMSTIMLMYSILGLFGYFRYG 426
L V FA G VV+ ++ T+ P+ P +VVA + + L Y + GY +G
Sbjct: 242 LGAVSFAFAGHNVVLEIQATIPSTPERPSKRPMWRGVVVAYAVVALCYFTVAFGGYHAFG 301
Query: 425 DVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYRNFA 246
+ + ++ ++L W A + + + Y ++ V D+ +
Sbjct: 302 NAVAPNVLISLEKPRWLVAAANLMVVVHVIGAYQVYAMPVFDMIETVLAKKLHLRPGLPL 361
Query: 245 QILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVIETVFRWEDLGRWNWI 66
++ AR++ V + IGI P + ++ G ++ IP +I + R +W+
Sbjct: 362 RVTARSAYVALTMFIGITFPFFDGLLGFFGGFGFAPTTYFIPCIIWLIMRKPAKYSLSWL 421
Query: 65 F-WKNLLI-VLFGVCSLVSG 12
W ++I +L + S + G
Sbjct: 422 MNWCFIIIGMLLMLVSPIGG 441
>01_05_0509 + 22811184-22812038,22813493-22814020
Length = 460
Score = 50.4 bits (115), Expect = 1e-06
Identities = 37/167 (22%), Positives = 67/167 (40%)
Frame = -2
Query: 620 DLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFG 441
+LS LP LS G GV V ++M + F P VL++++ L Y++ + G
Sbjct: 249 NLSELPTALSLYFVCFAGHGVFPTVYSSMNSKKDF---PKVLLISLVLCSLNYAVTAVLG 305
Query: 440 YFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKE 261
Y YG+ ++ +TL+LP A ++ Y L V E
Sbjct: 306 YLIYGEDVQAQVTLSLPTGKLYTRIAILTTLITPLAKYALVIQPVTIAIEEKLSATTDAE 365
Query: 260 YRNFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIP 120
++L T+ V + +P +I+ +G+ + ++ P
Sbjct: 366 INRLTRVLTSTAVVISTVVLACTVPFFGYLISFIGSSLNVTVAVLFP 412
>01_05_0584 + 23435620-23436408,23436966-23437508
Length = 443
Score = 48.8 bits (111), Expect = 4e-06
Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 7/210 (3%)
Frame = -2
Query: 620 DLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFG 441
+LS LP LS G GV V ++M+ + F P VL+++ L Y++ + G
Sbjct: 227 NLSGLPTALSLYFVCFAGHGVFPTVYSSMRARKDF---PKVLLISSVLCSLNYAVTAVLG 283
Query: 440 YFRYGDVLRGSITLNLPIDD-WPAVCAKTF----IALSIFFTYPLHFFVVLDIFTRYAEP 276
Y YG+ ++ +TLNLP + + T +A P+ + + T A
Sbjct: 284 YKIYGEDVQAQVTLNLPTGKLYTRIAILTTLITPLAKYALVIQPVTTAIEEKLSTAAAAV 343
Query: 275 HIKKEYRNFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIP--GVIETV 102
E ++L T+ V+ + +P +++ +G+ + ++ P ++
Sbjct: 344 AADAENNRLTRVLTSTTVVFSTVVLACTVPFFGYLMSFIGSSLNVTVAVLFPCLSYLKIY 403
Query: 101 FRWEDLGRWNWIFWKNLLIVLFGVCSLVSG 12
+GR+ +L++ GVC V G
Sbjct: 404 MPRGGVGRFEVAAIVGILVI--GVCVAVIG 431
>06_01_0872 + 6687849-6687864,6689622-6690235,6690927-6691478
Length = 393
Score = 48.0 bits (109), Expect = 7e-06
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 10/173 (5%)
Frame = -2
Query: 608 LPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRY 429
+P +S F G V + M+ + F P VL++ L Y ++G+ GY Y
Sbjct: 178 VPTAMSLYAFCFSGHAVFPMIYTGMRNRRMF---PHVLLICFIICTLAYGVMGVIGYLMY 234
Query: 428 GDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVV---------LDIFTRYAEP 276
G LR +TLNLP + A ++ F + L + L T +P
Sbjct: 235 GGSLRSQVTLNLPARKLSSSIAIYTTLINPFTKFALLITPIAEAIEGVLGLGTATTGGKP 294
Query: 275 HIKKEYRNFA-QILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIP 120
+YR A + RT+ V + +A+P ++ + G+ + +++P
Sbjct: 295 ---AQYRAAAVSVSVRTALVVSTTAVALAVPFFAYVVALTGSFLSATATMLLP 344
>01_05_0735 -
24749975-24750601,24751411-24751541,24752150-24752336,
24753801-24753898,24754182-24754689
Length = 516
Score = 47.6 bits (108), Expect = 9e-06
Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Frame = -2
Query: 602 AFLSTVIFA-MEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYG 426
AFLS I A + G G++ ++ T+ P LV+ S I + I + GY+ +G
Sbjct: 288 AFLSISILASVYGNGILPEIQATLAPPAAGK-MMKALVLCYSVIAFAFYIPSITGYWAFG 346
Query: 425 DVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKK------ 264
++ ++ +L D PA+ + L++ F L + ++++ A ++K
Sbjct: 347 SHVQSNVLKSLMPDTGPALAPTWLLGLAVLFVL-LQLLAIGLVYSQVAYEIMEKSSADAT 405
Query: 263 ----EYRNFA-QILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVIETV 102
RN ++L RT + C + LP I+ +VGA+ + L ++P V+ +
Sbjct: 406 RGKFSRRNVVPRLLLRTLYLAFCAFMAAMLPFFGDIVGVVGAVGFIPLDFVLPVVMYNI 464
>05_07_0288 +
29001228-29001399,29001493-29001723,29001817-29001914,
29002687-29002873,29003068-29003198,29003282-29003908
Length = 481
Score = 46.0 bits (104), Expect = 3e-05
Identities = 38/176 (21%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Frame = -2
Query: 602 AFLSTVIFA-MEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYG 426
AFLS I A + G G++ ++ T+ P LV+ + ++ + + + GY+ +G
Sbjct: 253 AFLSISILASVFGNGILPEIQATLAPPAAGK-MMKALVLCYTVVLFTFYLPAITGYWAFG 311
Query: 425 DVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEY---- 258
++ ++ +L D P++ + L++ L + ++++ A ++K
Sbjct: 312 SQVQSNVLQSLMPDKGPSLAPTWLLGLAVVLVL-LQLLAIALVYSQVAYEIMEKSSADAA 370
Query: 257 ------RNFA-QILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVI 111
RN A ++ RT+ V C + LP I+ +VGA+ + L ++P V+
Sbjct: 371 RGRFSRRNVAPRVALRTAYVAACAFVAAMLPFFGDIVGVVGAVGFIPLDFVLPVVM 426
>08_01_0185 +
1558580-1558755,1558848-1559737,1559828-1559919,
1560018-1560086,1560218-1560316
Length = 441
Score = 44.4 bits (100), Expect = 8e-05
Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 3/196 (1%)
Frame = -2
Query: 596 LSTVIFAMEGIGVVMPVENTMKK-PQHFLGCP--SVLVVAMSTIMLMYSILGLFGYFRYG 426
L V FA G VV+ ++ T+ P+ P +VVA + L Y + L GY+ +G
Sbjct: 227 LGDVAFAYAGHNVVLEIQATIPSTPEKPSKKPMWKGVVVAYIIVALCYFPVALVGYWAFG 286
Query: 425 DVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYRNFA 246
+ + +I + L W A + + + +Y ++ V D+ ++
Sbjct: 287 NHVDDNILITLSRPKWLIALANMMVVIHVIGSYQIYAMPVFDMIETVLVKKLRFPPGLTL 346
Query: 245 QILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVIETVFRWEDLGRWNWI 66
+++ART V I I P ++ G ++ +P ++ R++
Sbjct: 347 RLIARTLYVAFTMFIAITFPFFGGLLGFFGGFAFAPTTYFLPCIMWLAI--YKPRRFSLS 404
Query: 65 FWKNLLIVLFGVCSLV 18
++ N + ++ GV ++
Sbjct: 405 WFTNWICIILGVMLMI 420
>01_05_0586 + 23443371-23444645
Length = 424
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = -2
Query: 620 DLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFG 441
+L+ +P L G V + ++MK +HF VL+++ L Y + + G
Sbjct: 217 NLAGIPTSLGLYFVCFTGHAVFPTIYSSMKNSKHF---SKVLLISSVLCSLNYGLTAVLG 273
Query: 440 YFRYGDVLRGSITLNLP 390
Y YGD ++ +TLNLP
Sbjct: 274 YMIYGDDVQSQVTLNLP 290
>02_05_1018 -
33530834-33530926,33531036-33531098,33531193-33531236,
33531973-33532118,33532262-33532281,33532365-33532500,
33532585-33532804,33532905-33533085,33533495-33533518,
33534127-33534341,33534425-33534705,33535987-33536210
Length = 548
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 2/171 (1%)
Frame = -2
Query: 620 DLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFG 441
+L +P + F G V + +M F L + + +Y + G
Sbjct: 341 NLGGIPFAIGIYGFCYSGHSVFPNIYQSMSDRTKFT---KALFICFAICTAIYGSFAIIG 397
Query: 440 YFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKE 261
Y +GD ITLNLP + + A ++ F Y L +L+ R E +
Sbjct: 398 YLMFGDKTLSQITLNLPKHSFASKVALWTTVINPFTKYAL----LLNPLARSLEELRPEG 453
Query: 260 YRN--FAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGV 114
+ N I+ RT+ V I +P ++ ++G+L ++ +I+P +
Sbjct: 454 FLNETICSIILRTALVASTVCIAFLMPFFGLVMALIGSLLSILVAVIMPAL 504
>05_04_0029 -
17321378-17321905,17323348-17323525,17323531-17323910,
17323936-17324052
Length = 400
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = -2
Query: 620 DLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFG 441
+LS LP L+ G GV V ++MK + F P VL+++ L Y++ +
Sbjct: 189 NLSGLPTALTLYFVCFAGHGVFPTVYSSMKSKKDF---PKVLLISSVLCSLNYAVTVVLR 245
Query: 440 YFRYGDVLRGSITLNLP 390
Y YG+ ++ +T NLP
Sbjct: 246 YLIYGEDVQSQVTQNLP 262
>01_05_0504 + 22781737-22781799,22782033-22782287,22783652-22784077
Length = 247
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -2
Query: 632 ESXGDLSRLPAFLSTVIFA-MEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSI 456
ES LP LS F G GV V + MK + F P VL+++ L Y++
Sbjct: 65 ESEQVAHHLPTTLSLYFFIYFIGHGVFPTVHSLMKSKKDF---PKVLLISSVLCSLNYAV 121
Query: 455 LGLFGYFRYGDVLRGSITLNLP 390
L Y YG+ ++ +TLNLP
Sbjct: 122 TTLLRYLIYGEDVQAQVTLNLP 143
>10_08_0001 +
13984436-13984514,13984804-13984926,13985181-13985468,
13985560-13985690,13985764-13985979,13986059-13986442
Length = 406
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/161 (17%), Positives = 71/161 (44%)
Frame = -2
Query: 596 LSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVL 417
L T+ F+ G ++ +++++++P + + A S I++ Y L GY+ +G +
Sbjct: 191 LGTIAFSF-GDAMLPEIQSSVREPVR-MNMYKGVSTAYSIIVMSYWTLAFSGYWAFGSGV 248
Query: 416 RGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYRNFAQIL 237
+ I +L W V A F + I + ++ F + + +++
Sbjct: 249 QPYILSSLTFPRWTIVMANLFAVIQITGCFQIYCRPTFAQFEQRIQAKDAGYRARMWRLV 308
Query: 236 ARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGV 114
++ + + I A+P +++ GA+ ++ L ++P +
Sbjct: 309 YTSAYMVVITLISAAMPFFGDFVSVCGAVGFTPLDFVLPAL 349
>04_01_0524 -
6877156-6877175,6877254-6877281,6877394-6877529,
6877619-6877875
Length = 146
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = -2
Query: 620 DLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFG 441
+L +P + + G GV + ++MKK F P+V+ ++ ++++ + G
Sbjct: 45 NLPGIPIAVGLYGYCYSGHGVFPNIYSSMKKRSQF---PAVIFTCIALSTVLFAGAAIMG 101
Query: 440 YFRYGDVLRGSITLNLP 390
Y +G+ TLNLP
Sbjct: 102 YIMFGESTESQFTLNLP 118
>12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551
Length = 475
Score = 34.3 bits (75), Expect = 0.087
Identities = 41/202 (20%), Positives = 81/202 (40%), Gaps = 16/202 (7%)
Frame = -2
Query: 608 LPAFLSTVIFAMEGIGVVMPVENTMKKP--QHFLGCPSVLVVAMSTIMLMYSILGLFGYF 435
L AF + FA +++ +++T+K P S ++++T + Y + G GY
Sbjct: 244 LQAF-GDIAFAYSFSNILIEIQDTIKAPPPSEAKVMKSATRLSVATTTVFYMLCGCMGYA 302
Query: 434 RYGDVLRGSITLNLPIDD--WPAVCAKTFIALSI-----FFTYPLHFFVVLDIFTRYAE- 279
+GD ++ + W A I + + F P+ FV R+ +
Sbjct: 303 AFGDAAPDNLLTGFGFYEPFWLLDVANVAIVVHLVGAYQVFVQPIFAFVERWASRRWPDS 362
Query: 278 PHIKKEYR------NFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPG 117
I KE R + ++ R++ V + + + LP ++ ++GA+ + L + P
Sbjct: 363 AFIAKELRVGPFALSLFRLTWRSAFVCLTTVVAMLLPFFGNVVGLLGAVSFWPLTVYFPV 422
Query: 116 VIETVFRWEDLGRWNWIFWKNL 51
+ R G W+ K L
Sbjct: 423 EMYIAQRGVPRGSARWVSLKTL 444
>12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660
Length = 475
Score = 34.3 bits (75), Expect = 0.087
Identities = 41/202 (20%), Positives = 81/202 (40%), Gaps = 16/202 (7%)
Frame = -2
Query: 608 LPAFLSTVIFAMEGIGVVMPVENTMKKP--QHFLGCPSVLVVAMSTIMLMYSILGLFGYF 435
L AF + FA +++ +++T+K P S ++++T + Y + G GY
Sbjct: 244 LQAF-GDIAFAYSFSNILIEIQDTIKAPPPSEAKVMKSATRLSVATTTVFYMLCGCMGYA 302
Query: 434 RYGDVLRGSITLNLPIDD--WPAVCAKTFIALSI-----FFTYPLHFFVVLDIFTRYAE- 279
+GD ++ + W A I + + F P+ FV R+ +
Sbjct: 303 AFGDAAPDNLLTGFGFYEPFWLLDVANVAIVVHLVGAYQVFVQPIFAFVERWASRRWPDS 362
Query: 278 PHIKKEYR------NFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPG 117
I KE R + ++ R++ V + + + LP ++ ++GA+ + L + P
Sbjct: 363 AFIAKELRVGPFALSLFRLTWRSAFVCLTTVVAMLLPFFGNVVGLLGAVSFWPLTVYFPV 422
Query: 116 VIETVFRWEDLGRWNWIFWKNL 51
+ R G W+ K L
Sbjct: 423 EMYIAQRGVPRGSARWVSLKTL 444
>04_04_0125 + 22944505-22944556,22944665-22945363,22946445-22946947
Length = 417
Score = 33.9 bits (74), Expect = 0.11
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Frame = -2
Query: 467 MYSILGLFGYFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTR 288
M + + GY YGD + +TLNLP + +K I ++ + VV I
Sbjct: 255 MLPAMAVLGYLMYGDGVLSQVTLNLPS---ARLSSKVAIYTTLLNPVTKYALVVTPI-AA 310
Query: 287 YAEPHIKKEYRNFAQ---ILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIP 120
E I+ A+ + RT V + +ALP ++ +VG++ + +++P
Sbjct: 311 AVEERIRGAAGKGARAVSVAVRTLLVLSTVAVALALPFFADLMALVGSMLNVAVCMLLP 369
>01_05_0507 -
22800124-22800163,22800411-22800554,22801291-22801850,
22803207-22803264,22803885-22804124,22804191-22804315
Length = 388
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -2
Query: 581 FAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIM--LMYSILGLFGYFRYGDVLRGS 408
+ + IG+++ + N K + LV+ +S++M L ++ + GY YG+ ++
Sbjct: 113 YGLTAIGLIIIMVNENLKVNGGIKLAPGLVLLISSVMCSLNSTVTTVLGYLSYGEDVQVK 172
Query: 407 ITLNLP 390
+TLNLP
Sbjct: 173 VTLNLP 178
>12_01_0599 - 4892146-4893552
Length = 468
Score = 31.5 bits (68), Expect = 0.61
Identities = 42/207 (20%), Positives = 82/207 (39%), Gaps = 18/207 (8%)
Frame = -2
Query: 596 LSTVIFAMEGIGVVMPVENTMKKPQ----HFLGCPSVLVVAMSTIMLMYSILGLFGYFRY 429
L + FA V +++T+K P + S+L + +++ Y++ G GY +
Sbjct: 240 LGNIAFAFAFSNVYTEIQDTIKAPPPSEAKVMKQASLLSIVATSVF--YALCGWMGYAAF 297
Query: 428 GDVLRGSITLNLPIDD--WPAVCAKTFIALSIFFTY-----PLHFFVVLDIFTRYAEP-H 273
G+ ++ + W A IA+ + Y P+ FV R+ +
Sbjct: 298 GNAAPDNLLTGFGFFEPFWLVDAANVAIAVHLIGAYQVYCQPVFAFVERKASRRWPDSGF 357
Query: 272 IKKEYRNFAQILARTSCVW----ICGG--IGIALPMLEQIINIVGALFYSILGLIIPGVI 111
+ E R + ++ W +C + +ALP I+ ++GA+ + L + +P +
Sbjct: 358 VNSELRVWPFAISAFRLAWRSVFVCFTTVVAMALPFFGVIVGLLGAISFWPLTVYLPTEM 417
Query: 110 ETVFRWEDLGRWNWIFWKNLLIVLFGV 30
R G WI + L + F V
Sbjct: 418 YIAQRGVRRGSALWIGLRALAVAGFVV 444
>11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360
Length = 445
Score = 31.5 bits (68), Expect = 0.61
Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 16/211 (7%)
Frame = -2
Query: 599 FLSTVIFAMEGIGVVMPVENTMKKP--QHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYG 426
F+ ++ G GV ++T+K P +V+++T + Y + G GY +G
Sbjct: 216 FMGSLTGISVGTGVTSMQKDTIKAPPPSEAKVMKRATMVSVATTTVFYMLCGCMGYAAFG 275
Query: 425 DVLRGSITLNLPIDD--WPAVCAKTFIALSI-----FFTYPLHFFVVLDIFTRYAE-PHI 270
D ++ + W A I + + F P+ FV R+ + I
Sbjct: 276 DKSPDNLLTGFGFYEPFWLLDVANAAIVVHLVGAYQVFVQPIFAFVERWAAARWPDGGFI 335
Query: 269 KKEYR------NFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVIE 108
+E R + ++ RT+ V + + LP ++ ++GA+ + L + P +
Sbjct: 336 SRELRVGPFSLSVFRLTWRTAFVCATTVVSMLLPFFGDVVGLLGAVSFWPLTVYFPVEMY 395
Query: 107 TVFRWEDLGRWNWIFWKNLLIVLFGVCSLVS 15
R G W+ K VL C +VS
Sbjct: 396 IAQRGVRRGSARWLCLK----VLSAACLVVS 422
>02_05_0565 +
30010395-30010485,30011604-30011678,30011913-30012138,
30014432-30014649,30015170-30015303,30015424-30015675,
30016009-30016416
Length = 467
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = -2
Query: 611 RLPAFLSTVIFAMEGIGVVMPVENTMKKP---QHFLGCPSVLVVAMSTIMLMYSILGLFG 441
R+ + + FA V++ +E+T++ P + S +A++T Y G FG
Sbjct: 226 RVSQAIGDIAFAYPFASVLLEIEDTLRSPPPESETMRTASRASIAVTTFF--YLCCGCFG 283
Query: 440 YFRYGDVLRGSI 405
Y +GD G++
Sbjct: 284 YAAFGDATPGNL 295
>05_02_0164 - 7240739-7243051,7243902-7244036,7244322-7245371
Length = 1165
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -1
Query: 243 NTRQDLLRLDLWWNRHSIAYAGTDHQHCRS-TVLL 142
+ QD+ +DL +H+I G +H+HCR+ TVLL
Sbjct: 239 SVNQDVNEIDLL--KHAIEQFGGNHEHCRADTVLL 271
>01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708
Length = 488
Score = 29.1 bits (62), Expect = 3.3
Identities = 48/220 (21%), Positives = 87/220 (39%), Gaps = 22/220 (10%)
Frame = -2
Query: 608 LPAFLSTVIFAMEGIGVVMPVENTMKKP--QHFLGCPSVLVVAMSTIMLMYSILGLFGYF 435
L AF + FA +++ +++T++ P VV+++ + Y + G GY
Sbjct: 250 LQAF-GDIAFAYSYSLILIEIQDTIRAPPPSESAVMKRATVVSVAVTTVFYMLCGSMGYA 308
Query: 434 RYGDVLRGSITLNLPIDD--WPAVCAKTFIALSI-----FFTYPLHFFVVLDIFTRYAE- 279
+GD G++ + W A I + + F PL FV R+ E
Sbjct: 309 AFGDDAPGNLLTGFGFYEPFWLLDIANAAIVVHLVGAYQVFCQPLFAFVEKWAAQRWPES 368
Query: 278 PHIKKEYR------------NFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSIL 135
P+I E N + RT+ V + + LP ++ +GAL + L
Sbjct: 369 PYITGEVELRLSPSSRRCRVNLFRSTWRTAFVVATTVVSMLLPFFNDVVGFLGALGFWPL 428
Query: 134 GLIIPGVIETVFRWEDLGRWNWIFWKNLLIVLFGVCSLVS 15
+ P +E + + RW+ W L ++ G C ++S
Sbjct: 429 TVYFP--VEMYVVQKKVPRWS-TRWVCLQMLSVG-CLVIS 464
>05_07_0079 -
27539389-27539892,27540059-27540343,27540453-27540550,
27540951-27541042,27541155-27541259,27541360-27541567,
27542469-27542472,27542742-27542765,27545025-27546266
Length = 853
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 88 SSHLNTVSITPGIMSPSME*NSAPTMLMICSSIGNA-----MPIPPQIQTQEVLASICAK 252
S H V P I+S E ++APTML+ S + A +P+P + + E S+ A
Sbjct: 705 SKHKLPVDELP-IISFHTEASTAPTMLVTLSRVAQAELLPWLPLPRFLSSSEYAESLLAS 763
Query: 253 LRYSFLMCGSA 285
L+ ++ SA
Sbjct: 764 LKLPVVVPASA 774
>01_06_0330 + 28517378-28518266,28518438-28518550
Length = 333
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = -2
Query: 473 MLMYSILGLFGYFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIF 294
+L+ S L L G + V GS L D P++C+K+ + +YP + D +
Sbjct: 6 LLLLSFLVLIGV--HASVSHGSPPLPSTYD--PSICSKSSECGGVNISYPFYLSNATDYY 61
Query: 293 TRYA 282
TR++
Sbjct: 62 TRFS 65
>12_01_0002 - 4477-6144,6571-7440
Length = 845
Score = 27.9 bits (59), Expect = 7.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 184 CWNRSSTLSEHCSTPYW 134
CW ++T+S C+TP W
Sbjct: 344 CWPNTNTISSICTTPTW 360
>11_01_0003 - 6099-7766,8193-9062
Length = 845
Score = 27.9 bits (59), Expect = 7.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 184 CWNRSSTLSEHCSTPYW 134
CW ++T+S C+TP W
Sbjct: 344 CWPNTNTISSICTTPTW 360
>06_03_0048 + 15959234-15959590,15959973-15960314
Length = 232
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 151 SAPTMLMICSSIGNAMPIPPQIQTQEVLASICAKLRY 261
S P + S +P PP IQ +E+ S CA + +
Sbjct: 24 SQPELSTSTDSTDEVVPEPPSIQNEEIQTSDCAPILF 60
>05_05_0039 -
21782093-21782320,21782383-21782754,21783031-21783496,
21784896-21784993,21785179-21785362,21785462-21785574,
21785942-21786127,21786191-21786364
Length = 606
Score = 27.9 bits (59), Expect = 7.5
Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 2/162 (1%)
Frame = -2
Query: 593 STVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVL- 417
+ +++ G V + + + M KPQ F V + + T+ L S + Y+ +GD L
Sbjct: 239 TNILYTFGGHAVTVEIMHAMWKPQKFKYIYLVATLYVFTLTLP-SASAM--YWAFGDALL 295
Query: 416 -RGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYRNFAQI 240
+ LP W A + + F T+ + ++ + H + +
Sbjct: 296 THSNAFSLLPRSGWRDA-AVILMLIHQFITFGFACTPLYFVWEKAIGMHGTRSV--LTRA 352
Query: 239 LARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGV 114
LAR V + I P I + VGAL S IIP +
Sbjct: 353 LARLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSL 394
>04_03_0313 + 14233049-14234362,14234558-14235523
Length = 759
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = -1
Query: 315 LCGTRYIHPICGTTHQEGVS*FCTNTRQDLLRLDLWWNRHSIAY 184
L GT I IC +E S +Q L LDLWW R S Y
Sbjct: 682 LSGTLTIKSICNVKSKEEASEARLVDKQYLKTLDLWW-RDSDGY 724
>10_01_0049 -
668482-669283,669596-670131,670235-670452,670554-670653,
670706-670855
Length = 601
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = -2
Query: 239 LARTSCVWI---CG-GIGIALPMLEQIINIVGAL 150
+A T VW+ CG G+G +P L +I +VG L
Sbjct: 238 VASTVIVWVQDNCGWGLGFGIPTLFSVIGVVGFL 271
>09_04_0112 - 14757947-14758972
Length = 341
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 151 SAPTMLMICSSIGNAMPIPPQIQTQEVLAS 240
SAP ML+ S G A +PPQ+ + A+
Sbjct: 166 SAPHMLLSLGSSGQAQRLPPQVMSPAAAAA 195
>06_01_0581 -
4153668-4153883,4154070-4155104,4155718-4156292,
4158457-4158826,4159925-4160590,4161008-4161223,
4161725-4161793
Length = 1048
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/40 (25%), Positives = 25/40 (62%)
Frame = -2
Query: 329 YPLHFFVVLDIFTRYAEPHIKKEYRNFAQILARTSCVWIC 210
+PL +++D+ E +I+++ R+F Q+ ++ C ++C
Sbjct: 781 HPLGMLLIVDVSNGQLE-NIQRQARDFTQMRSQVPCKFVC 819
>01_06_1194 -
35313132-35313154,35314462-35314604,35314751-35315444,
35315746-35315895,35316011-35316419
Length = 472
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 7/108 (6%)
Frame = -2
Query: 599 FLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDV 420
FL T + A+ V P+ + K + +V + I Y+ +G FG+ +GD
Sbjct: 269 FLETELSALHL--AVHPIRTELSKTSDMKAAVRISLVLCAAI---YAAVGFFGFLLFGDA 323
Query: 419 LRGSITLNLPIDDWPAV------CAKTFIALSIFFTYP-LHFFVVLDI 297
+ N V A+ AL + +P LHF + +++
Sbjct: 324 TMADVLANFDRSSGAGVPQALNDAARLSYALHLVLVFPLLHFSLRVNV 371
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,335,834
Number of Sequences: 37544
Number of extensions: 401271
Number of successful extensions: 1041
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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