Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt12e11
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.8  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    23   6.4  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    23   8.5  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -3

Query: 322  FTSLWY*IYSPDMRNHTSRRSIV-ILHKYSPGPLAFG 215
            F  LW   Y PD +       +V +L K SP PL FG
Sbjct: 1446 FVRLWS-EYDPDAKGRIKHLDVVTLLRKISP-PLGFG 1480


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -2

Query: 410 SITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIK 267
           +I + LP D WP VC + F  +     Y     V LD+  ++    IK
Sbjct: 170 AIFVPLPADRWPRVC-EWFAVMEALPYYNDQNRVGLDMLRKHLAGKIK 216


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 108 LDYTWYYESQYGVEQCSDNVDDLFQHRQC 194
           L   ++ E+Q   +QC+ N +    HR C
Sbjct: 13  LSCLYFCEAQTDKKQCAKNNEYCLTHRDC 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,068
Number of Sequences: 2352
Number of extensions: 16464
Number of successful extensions: 54
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)