Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12e11
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 111 3e-25
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 107 5e-24
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 95 3e-20
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 91 5e-19
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 83 2e-16
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 48 4e-06
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 45 4e-05
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 45 4e-05
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 42 3e-04
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 39 0.004
AC006617-11|AAF39766.2| 356|Caenorhabditis elegans Serpentine r... 31 0.72
Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z48009-6|CAA88079.1| 329|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF106575-2|AAQ62448.1| 506|Caenorhabditis elegans Hypothetical ... 27 8.9
AC006722-5|AAK68410.3| 703|Caenorhabditis elegans Hypothetical ... 27 8.9
AC006645-10|AAF39849.1| 746|Caenorhabditis elegans Hypothetical... 27 8.9
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 111 bits (268), Expect = 3e-25
Identities = 61/206 (29%), Positives = 111/206 (53%), Gaps = 2/206 (0%)
Frame = -2
Query: 623 GDLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLF 444
G + LP F TV+FA EG+ VV+P+EN M +P HF+ VL + ++L+Y +G F
Sbjct: 230 GAVENLPLFFGTVMFAFEGVAVVLPIENQMNEPIHFITPNGVLNTSCILVLLVYMTVGFF 289
Query: 443 GYFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKK 264
G+ RYG+ ++ ++TLNLP + K L I +YPL F+V ++ ++ + + +
Sbjct: 290 GFLRYGNDIKDTLTLNLPQTPF-YQAIKVMFVLCILVSYPLQFYVPMERVEKWIKRKVVE 348
Query: 263 EYRNFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVIETV--FRWE 90
+ R V + + +P L I++VG++ + L L+ P +IE + + +
Sbjct: 349 AKQEPMIYAIRFGGVLLTCAMAQLIPHLALFISLVGSVAGTSLTLVFPPLIELLCSYSKQ 408
Query: 89 DLGRWNWIFWKNLLIVLFGVCSLVSG 12
+L +W WI +N+ ++ F + +G
Sbjct: 409 ELTKWVWI--RNIGLMAFAMVGFTTG 432
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 107 bits (258), Expect = 5e-24
Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 2/206 (0%)
Frame = -2
Query: 623 GDLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLF 444
G + LP F TV+FA EG+ V+MP+EN M+ P F+ VL + ++ ++S+ G +
Sbjct: 240 GKATDLPLFFGTVMFAFEGVAVIMPIENRMQSPHAFISWNGVLNSSCLVVLAIFSVTGFY 299
Query: 443 GYFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKK 264
GY G+ ++ + TLNLP+ + F+A I +YPL F+V ++ ++ I
Sbjct: 300 GYLSLGNDVKDTATLNLPMTPFYQTIKLMFVA-CIMISYPLQFYVPMERIEKWITRKIPV 358
Query: 263 EYRNFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVIE--TVFRWE 90
+ + +AR S V + I +P L I+++GA + + L+ P IE T +
Sbjct: 359 DKQTLYIYIARYSGVILTCAIAELIPHLALFISLIGAFSGASMALLFPPCIELLTSYAKN 418
Query: 89 DLGRWNWIFWKNLLIVLFGVCSLVSG 12
+L WI KN++++ F +G
Sbjct: 419 ELSTGLWI--KNIVLLTFAFIGFTTG 442
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 95.5 bits (227), Expect = 3e-20
Identities = 50/166 (30%), Positives = 91/166 (54%), Gaps = 3/166 (1%)
Frame = -2
Query: 590 TVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVLRG 411
++I++ EG +V+P+EN++K PQ G VL AM+ +++ Y+ LG FGY +G +RG
Sbjct: 240 SLIYSFEGQAMVLPLENSLKHPQDMRGLTGVLSTAMNVVIVFYAFLGFFGYIAFGPDVRG 299
Query: 410 SITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYRNFAQIL-- 237
S+TLNLP + +V K + L + L F+++ + + + + + +IL
Sbjct: 300 SLTLNLP-NSVLSVTVKGLLVLKVLLGNALQLFIIVQMLLPSLQAKVSENRKLIHKILPY 358
Query: 236 -ARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVIETV 102
R S + + + +A+P L +II VG ++ LIIP ++ +
Sbjct: 359 ALRLSLMLVSLSLALAVPNLTEIIPFVGITSGLLISLIIPSFLDCI 404
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 91.5 bits (217), Expect = 5e-19
Identities = 50/163 (30%), Positives = 89/163 (54%), Gaps = 3/163 (1%)
Frame = -2
Query: 587 VIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVLRGS 408
+I++ EG +V+P+EN++K P+ G VL AM+ + ++Y+ LG FGY +G ++GS
Sbjct: 269 LIYSFEGQAMVLPMENSLKYPKDMTGATGVLSTAMNLVTVLYAFLGFFGYVTFGPAVQGS 328
Query: 407 ITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYRNFAQIL--- 237
+TLNLP + V K + L IFF + +V++ + I ++ + ++L
Sbjct: 329 LTLNLP-NSILTVSIKGLLVLKIFFGSAIQLYVIVQMLLPSLRSKISEDRKMVHRLLPYA 387
Query: 236 ARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVIE 108
R + I I + +P L QII +VG ++ LI+P ++
Sbjct: 388 LRLGLMLISLCIALIVPNLMQIIPLVGITSGLLISLILPSFLD 430
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 82.6 bits (195), Expect = 2e-16
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Frame = -2
Query: 620 DLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFG 441
DL + + T+++A+EG +V+P+EN MKKP+ G VL V + ++++YS G FG
Sbjct: 214 DLMGIVSAAGTILYALEGQAMVLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYSFAGFFG 273
Query: 440 YFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKE 261
+ YG+ ++ SITLNLP +D + K + ++ + + F ++ + P IKK+
Sbjct: 274 FLTYGNDVQDSITLNLP-NDHLGIFVKAVLLFVVYSGFLIQVFPIVAMIW----PAIKKK 328
Query: 260 YRNFAQILART----------SCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGV 114
R + T S V + + A+P L ++ +VG +L L+ P +
Sbjct: 329 LRTTCGVSTTTKRIVHFAFRYSIVIVVFLLSYAIPRLSDMVPLVGVTAGMLLALVFPSL 387
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 82.6 bits (195), Expect = 2e-16
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Frame = -2
Query: 620 DLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFG 441
DL + + T+++A+EG +V+P+EN MKKP+ G VL V + ++++YS G FG
Sbjct: 269 DLMGIVSAAGTILYALEGQAMVLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYSFAGFFG 328
Query: 440 YFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKE 261
+ YG+ ++ SITLNLP +D + K + ++ + + F ++ + P IKK+
Sbjct: 329 FLTYGNDVQDSITLNLP-NDHLGIFVKAVLLFVVYSGFLIQVFPIVAMIW----PAIKKK 383
Query: 260 YRNFAQILART----------SCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGV 114
R + T S V + + A+P L ++ +VG +L L+ P +
Sbjct: 384 LRTTCGVSTTTKRIVHFAFRYSIVIVVFLLSYAIPRLSDMVPLVGVTAGMLLALVFPSL 442
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical
protein F59B2.2 protein.
Length = 460
Score = 68.9 bits (161), Expect = 3e-12
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Frame = -2
Query: 584 IFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVLRGSI 405
++A EG +++P+EN + P FL VL M + LG FGY +GD + +I
Sbjct: 244 MYAFEGQTMILPIENKLDNPAAFLAPFGVLSTTMIICTAFMTALGFFGYTGFGDSIAPTI 303
Query: 404 TLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYRNFAQILA--- 234
T N+P + + F+ L + +VV D+F + N + L+
Sbjct: 304 TTNVPKEGLYST-VNVFLMLQSLLGNSIAMYVVYDMFFNGFRRKFGARFPNVPKWLSDKG 362
Query: 233 -RTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVIETVFRWED-------LGR 78
R V + + + +P LE +I +VG ++ LI P E + W D R
Sbjct: 363 FRVFWVLVTYLMAVLIPKLEIMIPLVGVTSGALCALIFPPFFEMITFWTDWKGLLTYRQR 422
Query: 77 WNWIFWKNLLIVLFGVCSLVSG 12
IF NL+++ GV ++++G
Sbjct: 423 MTKIF-INLVVMAIGVFAIIAG 443
>U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical
protein R02F2.8 protein.
Length = 494
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
Frame = -2
Query: 608 LPAFLS--TVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYF 435
L AF++ T +FA G + +++ MKKP HF+ +V+A+ ++Y + + GYF
Sbjct: 214 LKAFMAFGTFVFAFGGHATLPTIQHDMKKPAHFV---HSVVLAIIFCTMLYMCIAVGGYF 270
Query: 434 RYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYR 255
YG + +I +L I W IA+ + T +V+ + E +K ++
Sbjct: 271 VYGSTVGEAIIPSLQI-KWIQQTVNLMIAVHVITT----IVIVMSPPIQQVEQLLKVPHK 325
Query: 254 -NFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVIETVFRWEDL 84
+ L R+ W IG+++P +++++GA ++ LI+P + R +++
Sbjct: 326 FGVKRFLVRSILFWFVIFIGLSIPHFGPVLDLIGASTMVLMTLILPPIFYLSIRTQEI 383
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/89 (30%), Positives = 49/89 (55%)
Frame = -2
Query: 596 LSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVL 417
L+T+IFA G + + + MK PQH+ C +++ + L+Y+ + LFG++ YGD +
Sbjct: 200 LATIIFAYGGHPCIPTIVHDMKTPQHYFRC---FLLSYIALFLLYTPVSLFGFWIYGDSV 256
Query: 416 RGSITLNLPIDDWPAVCAKTFIALSIFFT 330
SI ++ D + IA+ +FF+
Sbjct: 257 SDSIISSIQNDSLRRGIS-ILIAVHVFFS 284
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 45.2 bits (102), Expect = 4e-05
Identities = 39/209 (18%), Positives = 90/209 (43%), Gaps = 11/209 (5%)
Frame = -2
Query: 620 DLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFG 441
+++ LP + V+F + +E MK P F +A + +++ G+ G
Sbjct: 263 NINTLPTIVGMVVFGYTSHIFLPNLEGNMKNPAQFNVMLKWSHIAAAVFKVVF---GMLG 319
Query: 440 YFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVL-----DIFTRYAEP 276
+ +G++ + I+ +LP + + + + +YPL F+ + ++F Y +
Sbjct: 320 FLTFGELTQEEISNSLPNQSF-KILVNLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQT 378
Query: 275 HI------KKEYRNFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGV 114
K R +A + R V + +++P L +++ +VG + ++L I P +
Sbjct: 379 PFTSCYSPDKSLREWA-VTLRIILVLFTLFVALSVPYLVELMGLVGNITGTMLSFIWPAL 437
Query: 113 IETVFRWEDLGRWNWIFWKNLLIVLFGVC 27
+ + L + F + ++I+ VC
Sbjct: 438 FHLYIKEKTLNNFEKRFDQGIIIMGCSVC 466
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 45.2 bits (102), Expect = 4e-05
Identities = 39/209 (18%), Positives = 90/209 (43%), Gaps = 11/209 (5%)
Frame = -2
Query: 620 DLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFG 441
+++ LP + V+F + +E MK P F +A + +++ G+ G
Sbjct: 263 NINTLPTIVGMVVFGYTSHIFLPNLEGNMKNPAQFNVMLKWSHIAAAVFKVVF---GMLG 319
Query: 440 YFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVL-----DIFTRYAEP 276
+ +G++ + I+ +LP + + + + +YPL F+ + ++F Y +
Sbjct: 320 FLTFGELTQEEISNSLPNQSF-KILVNLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQT 378
Query: 275 HI------KKEYRNFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGV 114
K R +A + R V + +++P L +++ +VG + ++L I P +
Sbjct: 379 PFTSCYSPDKSLREWA-VTLRIILVLFTLFVALSVPYLVELMGLVGNITGTMLSFIWPAL 437
Query: 113 IETVFRWEDLGRWNWIFWKNLLIVLFGVC 27
+ + L + F + ++I+ VC
Sbjct: 438 FHLYIKEKTLNNFEKRFDQGIIIMGCSVC 466
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 42.3 bits (95), Expect = 3e-04
Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Frame = -2
Query: 590 TVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVLRG 411
T++F+ G +++ MKKP HF +++A I + Y + + GYF YG L
Sbjct: 209 TIMFSYGGHCAFPTIQHDMKKPHHF---SRSIIIAFIIIFIFYLPVSMSGYFVYGSSLTD 265
Query: 410 SITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYR-NFAQILA 234
SI I + +T + + I L + + + E + + + +I+A
Sbjct: 266 SI-----IPSIQNINIQTIVNILISLHVSLALTITFNPLNQEFEEILNMSHDFGWQRIVA 320
Query: 233 RTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIP 120
R + + ++P ++++VG +++ L++P
Sbjct: 321 RALVMLSVVFVAESVPNFGVLLDLVGGSTITMMALVVP 358
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/145 (20%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Frame = -2
Query: 584 IFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVLRGSI 405
+FA G V +++ MK P+ F + ++++Y L +F + YGD + S+
Sbjct: 244 LFAFSGHYVFPTIQHDMKNPRDFT---KSIFAGFLGVVILYLPLCIFAFVVYGDSMTDSV 300
Query: 404 TLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYR-NFAQILART 228
++ P++ + L I F + +V++ + E + K + +++ RT
Sbjct: 301 IYSIQS---PSL--QLLANLMISFHCIMTLVIVINPLNQEVEHYAKISHAFGIGRVITRT 355
Query: 227 SCVWICGGIGIALPMLEQIINIVGA 153
+++ + + +P + ++N+VGA
Sbjct: 356 IVLFLVLFVALTVPDFQPVMNLVGA 380
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 38.7 bits (86), Expect = 0.004
Identities = 31/159 (19%), Positives = 70/159 (44%)
Frame = -2
Query: 596 LSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVL 417
+ T++F++ G +++ MK+P+ F + +A + + MY + + GY YGD L
Sbjct: 251 MGTLLFSVGGHSAFPTIQHDMKQPKEFTRS---VFLAFTIMAFMYIPVCIMGYLVYGDSL 307
Query: 416 RGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYRNFAQIL 237
R SI ++ W I + T + F ++ H+ + + + +
Sbjct: 308 RDSIIPSIQ-TVWIQQAINIMITVHCILTLTIVFNPLMQEVEELF--HVPQRF-GPKRAI 363
Query: 236 ARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIP 120
RT + + ++P ++++VG ++ +I+P
Sbjct: 364 VRTGIMVAVVFVAESVPTFGPLLDLVGGSTLTLTSVIMP 402
>AC006617-11|AAF39766.2| 356|Caenorhabditis elegans Serpentine
receptor, class z protein56 protein.
Length = 356
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = -2
Query: 185 MLEQIINIVGALFYSILGLIIPGVIETVFRWEDLGRWNWIFWKNLLIVLFGVCSLVSGCT 6
ML I+ I+ AL Y + + + + E+ + +IFW+ +++V+F + SLV T
Sbjct: 194 MLGYILLIISALLYLPIMISVRKLSHLASAQENKPQ-KYIFWQTMIVVIFQLISLVQSLT 252
Query: 5 V 3
+
Sbjct: 253 L 253
>Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical
protein B0001.2 protein.
Length = 926
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 64 KIQF-HLPRSSHLNTVSITPGIMSPSM---E*NSAPTMLMICSSIGNAMPIPPQIQTQE 228
KI + HLP S +N PGIM P + P LM + M IPPQ+ ++
Sbjct: 385 KINYSHLPEPSPMNWQMGPPGIMHPMRPIGHFGAIPNPLMYSMPYMSNMAIPPQMMNRQ 443
>Z48009-6|CAA88079.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.8 protein.
Length = 329
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 389 IDDWPAVCAKTFIALSIFFTYPLHFFVVLDI 297
ID +C TF+ F Y L FF++ I
Sbjct: 232 IDSTSTICFLTFVQFIFFLVYSLGFFIIKSI 262
>Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical
protein F25H9.3 protein.
Length = 352
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 548 VENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYF 435
V+ +KP HF GC S + I L YS + YF
Sbjct: 263 VDKIHEKPLHFKGCISANEQGDNKIQLGYSFINEIPYF 300
>AF106575-2|AAQ62448.1| 506|Caenorhabditis elegans Hypothetical
protein K04F1.14b protein.
Length = 506
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 90 FPSKYCLDYTWYYESQYGVEQCSDNVDDLFQHR-QCYAYST 209
FP ++ + + G + SDN LFQHR C Y T
Sbjct: 416 FPRMRYASFSVFSLEKQGFVEISDNSQTLFQHRNDCMQYQT 456
>AC006722-5|AAK68410.3| 703|Caenorhabditis elegans Hypothetical
protein Y19D10A.10 protein.
Length = 703
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 103 TVSITPGIMSPSME*NSAPTMLMICSSIGNAMPIP 207
+V + PG+ +PS E N+ +L +GN + +P
Sbjct: 153 SVGVVPGVWAPSNETNTFTAILSCALQLGNIICMP 187
>AC006645-10|AAF39849.1| 746|Caenorhabditis elegans Hypothetical
protein F56A4.11 protein.
Length = 746
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 103 TVSITPGIMSPSME*NSAPTMLMICSSIGNAMPIP 207
+V + PG+ +PS E N+ +L +GN + +P
Sbjct: 196 SVGVVPGVWAPSNETNTFTAILSCALQLGNIICMP 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,027,796
Number of Sequences: 27780
Number of extensions: 362491
Number of successful extensions: 1023
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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