Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12e10
(735 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69908-1|CAA49533.1| 141|Homo sapiens protein ( H.sapiens gene ... 84 6e-16
D13119-1|BAA02421.1| 141|Homo sapiens ATP synthase subunit c pr... 84 6e-16
BC020826-1|AAH20826.1| 141|Homo sapiens ATP5G2 protein protein. 84 6e-16
X69907-1|CAA49532.1| 136|Homo sapiens P1 gene for c subunit of ... 80 9e-15
U09813-1|AAA78807.1| 142|Homo sapiens mitochondrial ATP synthas... 80 9e-15
M16453-1|AAA51806.1| 100|Homo sapiens ATP5A protein. 80 9e-15
D13118-1|BAA02420.1| 136|Homo sapiens ATP synthase subunit c pr... 80 9e-15
CR533449-1|CAG38480.1| 136|Homo sapiens ATP5G1 protein. 80 9e-15
CR407601-1|CAG28411.1| 142|Homo sapiens ATP5G3 protein. 80 9e-15
BT007230-1|AAP35894.1| 136|Homo sapiens ATP synthase, H+ transp... 80 9e-15
BC106881-1|AAI06882.1| 142|Homo sapiens ATP synthase, H+ transp... 80 9e-15
BC004963-1|AAH04963.1| 136|Homo sapiens ATP synthase, H+ transp... 80 9e-15
AC096649-1|AAX88970.1| 142|Homo sapiens unknown protein. 80 9e-15
M16439-1|AAA51804.1| 58|Homo sapiens ATP5A protein. 62 2e-09
AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein. 33 1.1
AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo ... 33 1.1
AB011536-1|BAA32464.1| 1364|Homo sapiens MEGF2 protein. 33 1.1
AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type... 31 4.3
AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein. 31 4.3
AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein. 31 4.3
>X69908-1|CAA49533.1| 141|Homo sapiens protein ( H.sapiens gene for
mitochondrial ATP synthase c subunit (P2 form). ).
Length = 141
Score = 83.8 bits (198), Expect = 6e-16
Identities = 44/74 (59%), Positives = 51/74 (68%)
Frame = -1
Query: 693 TQLSAVRSFQTTSVTKDXDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQ 514
T L + RSFQT+++++D D+AAKF VFGSLIIGYARNPSLKQ
Sbjct: 51 TSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQ 110
Query: 513 QLFSYAILGFALSE 472
QLFSYAILGFALSE
Sbjct: 111 QLFSYAILGFALSE 124
>D13119-1|BAA02421.1| 141|Homo sapiens ATP synthase subunit c
precursor protein.
Length = 141
Score = 83.8 bits (198), Expect = 6e-16
Identities = 44/74 (59%), Positives = 51/74 (68%)
Frame = -1
Query: 693 TQLSAVRSFQTTSVTKDXDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQ 514
T L + RSFQT+++++D D+AAKF VFGSLIIGYARNPSLKQ
Sbjct: 51 TSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQ 110
Query: 513 QLFSYAILGFALSE 472
QLFSYAILGFALSE
Sbjct: 111 QLFSYAILGFALSE 124
>BC020826-1|AAH20826.1| 141|Homo sapiens ATP5G2 protein protein.
Length = 141
Score = 83.8 bits (198), Expect = 6e-16
Identities = 44/74 (59%), Positives = 51/74 (68%)
Frame = -1
Query: 693 TQLSAVRSFQTTSVTKDXDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQ 514
T L + RSFQT+++++D D+AAKF VFGSLIIGYARNPSLKQ
Sbjct: 51 TSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQ 110
Query: 513 QLFSYAILGFALSE 472
QLFSYAILGFALSE
Sbjct: 111 QLFSYAILGFALSE 124
>X69907-1|CAA49532.1| 136|Homo sapiens P1 gene for c subunit of
human mitochondrial ATP protein.
Length = 136
Score = 79.8 bits (188), Expect = 9e-15
Identities = 45/75 (60%), Positives = 50/75 (66%)
Frame = -1
Query: 696 PTQLSAVRSFQTTSVTKDXDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLK 517
P Q+ A R FQT+ V++D D+AAKF VFGSLIIGYARNPSLK
Sbjct: 46 PLQV-ARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLK 104
Query: 516 QQLFSYAILGFALSE 472
QQLFSYAILGFALSE
Sbjct: 105 QQLFSYAILGFALSE 119
>U09813-1|AAA78807.1| 142|Homo sapiens mitochondrial ATP synthase
subunit 9 precursor protein.
Length = 142
Score = 79.8 bits (188), Expect = 9e-15
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = -1
Query: 675 RSFQTTSVTKDXDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFSYA 496
R FQT+++++D D+AAKF VFGSLIIGYARNPSLKQQLFSYA
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYA 117
Query: 495 ILGFALSE 472
ILGFALSE
Sbjct: 118 ILGFALSE 125
>M16453-1|AAA51806.1| 100|Homo sapiens ATP5A protein.
Length = 100
Score = 79.8 bits (188), Expect = 9e-15
Identities = 45/75 (60%), Positives = 50/75 (66%)
Frame = -1
Query: 696 PTQLSAVRSFQTTSVTKDXDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLK 517
P Q+ A R FQT+ V++D D+AAKF VFGSLIIGYARNPSLK
Sbjct: 10 PLQV-ARRGFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLK 68
Query: 516 QQLFSYAILGFALSE 472
QQLFSYAILGFALSE
Sbjct: 69 QQLFSYAILGFALSE 83
>D13118-1|BAA02420.1| 136|Homo sapiens ATP synthase subunit c
precursor protein.
Length = 136
Score = 79.8 bits (188), Expect = 9e-15
Identities = 45/75 (60%), Positives = 50/75 (66%)
Frame = -1
Query: 696 PTQLSAVRSFQTTSVTKDXDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLK 517
P Q+ A R FQT+ V++D D+AAKF VFGSLIIGYARNPSLK
Sbjct: 46 PLQV-ARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLK 104
Query: 516 QQLFSYAILGFALSE 472
QQLFSYAILGFALSE
Sbjct: 105 QQLFSYAILGFALSE 119
>CR533449-1|CAG38480.1| 136|Homo sapiens ATP5G1 protein.
Length = 136
Score = 79.8 bits (188), Expect = 9e-15
Identities = 45/75 (60%), Positives = 50/75 (66%)
Frame = -1
Query: 696 PTQLSAVRSFQTTSVTKDXDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLK 517
P Q+ A R FQT+ V++D D+AAKF VFGSLIIGYARNPSLK
Sbjct: 46 PLQV-ARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLK 104
Query: 516 QQLFSYAILGFALSE 472
QQLFSYAILGFALSE
Sbjct: 105 QQLFSYAILGFALSE 119
>CR407601-1|CAG28411.1| 142|Homo sapiens ATP5G3 protein.
Length = 142
Score = 79.8 bits (188), Expect = 9e-15
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = -1
Query: 675 RSFQTTSVTKDXDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFSYA 496
R FQT+++++D D+AAKF VFGSLIIGYARNPSLKQQLFSYA
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYA 117
Query: 495 ILGFALSE 472
ILGFALSE
Sbjct: 118 ILGFALSE 125
>BT007230-1|AAP35894.1| 136|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit c
(subunit 9), protein.
Length = 136
Score = 79.8 bits (188), Expect = 9e-15
Identities = 45/75 (60%), Positives = 50/75 (66%)
Frame = -1
Query: 696 PTQLSAVRSFQTTSVTKDXDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLK 517
P Q+ A R FQT+ V++D D+AAKF VFGSLIIGYARNPSLK
Sbjct: 46 PLQV-ARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLK 104
Query: 516 QQLFSYAILGFALSE 472
QQLFSYAILGFALSE
Sbjct: 105 QQLFSYAILGFALSE 119
>BC106881-1|AAI06882.1| 142|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit C3
(subunit 9) protein.
Length = 142
Score = 79.8 bits (188), Expect = 9e-15
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = -1
Query: 675 RSFQTTSVTKDXDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFSYA 496
R FQT+++++D D+AAKF VFGSLIIGYARNPSLKQQLFSYA
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYA 117
Query: 495 ILGFALSE 472
ILGFALSE
Sbjct: 118 ILGFALSE 125
>BC004963-1|AAH04963.1| 136|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit C1
(subunit 9) protein.
Length = 136
Score = 79.8 bits (188), Expect = 9e-15
Identities = 45/75 (60%), Positives = 50/75 (66%)
Frame = -1
Query: 696 PTQLSAVRSFQTTSVTKDXDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLK 517
P Q+ A R FQT+ V++D D+AAKF VFGSLIIGYARNPSLK
Sbjct: 46 PLQV-ARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLK 104
Query: 516 QQLFSYAILGFALSE 472
QQLFSYAILGFALSE
Sbjct: 105 QQLFSYAILGFALSE 119
>AC096649-1|AAX88970.1| 142|Homo sapiens unknown protein.
Length = 142
Score = 79.8 bits (188), Expect = 9e-15
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = -1
Query: 675 RSFQTTSVTKDXDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFSYA 496
R FQT+++++D D+AAKF VFGSLIIGYARNPSLKQQLFSYA
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYA 117
Query: 495 ILGFALSE 472
ILGFALSE
Sbjct: 118 ILGFALSE 125
>M16439-1|AAA51804.1| 58|Homo sapiens ATP5A protein.
Length = 58
Score = 62.5 bits (145), Expect = 2e-09
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = -1
Query: 561 FGSLIIGYARNPSLKQQLFSYAILGFALSE 472
FGSLIIGYARNPSLKQQLFSYAI+GFALSE
Sbjct: 12 FGSLIIGYARNPSLKQQLFSYAIVGFALSE 41
>AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.
Length = 4186
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 532 PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFGSRVXVLSDRCGLEG 672
PG+A+ G A DC S++ CRC+ T FG + S R LEG
Sbjct: 2556 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFGVLMDA-SPRERLEG 2604
>AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo 1
protein.
Length = 3312
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 532 PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFGSRVXVLSDRCGLEG 672
PG+A+ G A DC S++ CRC+ T FG + S R LEG
Sbjct: 2486 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFGVLMDA-SPRERLEG 2534
>AB011536-1|BAA32464.1| 1364|Homo sapiens MEGF2 protein.
Length = 1364
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 532 PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFGSRVXVLSDRCGLEG 672
PG+A+ G A DC S++ CRC+ T FG + S R LEG
Sbjct: 538 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFGVLMDA-SPRERLEG 586
>AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type F
protein.
Length = 870
Score = 31.1 bits (67), Expect = 4.3
Identities = 20/58 (34%), Positives = 23/58 (39%)
Frame = +1
Query: 520 EGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVXVLSDRCGLEGPHCRELC 693
+G GIA EG CS CRC FG+ R GP C+ELC
Sbjct: 71 QGDECGIAVCEGNSTCSENEVCVRPGECRCRH-GYFGANCDTKCPR-QFWGPDCKELC 126
>AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein.
Length = 866
Score = 31.1 bits (67), Expect = 4.3
Identities = 20/58 (34%), Positives = 23/58 (39%)
Frame = +1
Query: 520 EGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVXVLSDRCGLEGPHCRELC 693
+G GIA EG CS CRC FG+ R GP C+ELC
Sbjct: 71 QGDECGIAVCEGNSTCSENEVCVRPGECRCRH-GYFGANCDTKCPR-QFWGPDCKELC 126
>AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein.
Length = 866
Score = 31.1 bits (67), Expect = 4.3
Identities = 20/58 (34%), Positives = 23/58 (39%)
Frame = +1
Query: 520 EGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVXVLSDRCGLEGPHCRELC 693
+G GIA EG CS CRC FG+ R GP C+ELC
Sbjct: 71 QGDECGIAVCEGNSTCSENEVCVRPGECRCRH-GYFGANCDTKCPR-QFWGPDCKELC 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,746,835
Number of Sequences: 237096
Number of extensions: 2199204
Number of successful extensions: 5716
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5697
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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